Near infrared spectral assessment of staygreen barley genotypes under heat stress

Journal of Near Infrared Spectroscopy

Volumn 23, Issue 3, 2015, Pages 145-153

  Gous, Peter W ^a   Meder, Roger ^b   Fox, Glen P ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b Meder Consulting   (Australia)

Author keywords

Barley; NIR spectroscopy; Principal component analysis; Stay green; Water stress

Indexed keywords

CHLOROPHYLL; COSMETICS; DROUGHT; GRAIN (AGRICULTURAL PRODUCT); NEAR INFRARED SPECTROSCOPY; PHYSIOLOGICAL MODELS; PHYSIOLOGY; PLANTS (BOTANY); PRINCIPAL COMPONENT ANALYSIS; SPECTROMETERS; SPECTRUM ANALYSIS; THERMAL STRESS;

BARLEY; BARLEY (HORDEUM VULGARE L.); NEAR INFRARED SPECTRAL; NIR SPECTROSCOPY; NON-DESTRUCTIVE ANALYSIS; PHYSIOLOGICAL AND BIOCHEMICAL MECHANISMS; STAY-GREEN; WATER STRESS;

INFRARED DEVICES;

EID: 84940384295     PISSN: 09670335     EISSN: 17516552     Source Type: Journal    
DOI: 10.1255/jnirs.1163     Document Type: Article

References (42)

1. G.P. Fox, J.F. Panozzo, C.D. Li, R.C.M. Lance, P.A. Inkerman and R.J. Henry, " Molecular basis of barley quality" , Austr. J. Agric. Res. 54, 1081-1101 (2003). doi: Http://dx.doi.org/10.1071/AR02237
2. J. Hollmann, P.L. Gregersen and K. Krupinska, " Identification of predominant genes involved in regulation and execution of senescence-associated nitrogen remobilization in flag leaves of field grown barley ", J. Exp. Bot. 65, 3963-3973 (2014). doi: Http://dx.doi.org/10.1093/jxb/eru094
3. E. Li, J. Hasjim, S. Dhital, I.D. Godwin and R.G. Gilbert, " Effect of a gibberellin-biosynthesis inhibitor treatment on the physicochemical properties of sorghum starch" , J. Cereal Sci. 53, 328-334 (2011). doi: Http://dx.doi.org/10.1016/j.jcs.2011.02.002
4. P. W. Gous, J. Hasjim, J. Franckowiak, G.P. Fox and R.G. Gilbert, " Barley genotype expressing 'stay-green'-like characteristics maintains starch quality of the grain during water stress condition ", J. Cereal Sci. 1, 414-419 (2013). doi: Http://dx.doi.org/10.1016/j.jcs.2013.08.002
5. K. Harris, P.K. Subudhi, A. Borrell, D. Jordan, D. Rosenow, H. Nguyen, P. Klein, R. Klein and J. Mullet, " Sorghum stay-green QTL individually reduce post-floweringdrought-induced leaf senescence ", J. Exper. Bot. 58, 327-338 (2007). doi: Http://dx.doi.org/10.1093/jxb/erl225
6. W. Xu, P.K. Subudhi, O.R. Crasta, D.T. Rosenow, J.E. Mullet and H.T. Nguyen, " Molecular mapping of QTLs conferring stay-green in grain sorghum (Sorghum bicolor L. Moench) ", Genome 43, 461-469 (2000). doi: Http://dx.doi.org/10.1139/gen-43-3-461
7. W. Xu, D.T. Rosenow and H.T. Nguyen, " Stay green trait in grain sorghum: Relationship between visual rating and leaf chlorophyll concentration" , Plant Breed. 119, 365-367 (2000). doi: Http://dx.doi.org/10.1046/j.1439-0523.2000.00506.x
8. P.K. Subudhi, D.T. Rosenow and H.T. Nguyen, " Quantitative trait loci for the stay green trait in sorghum(Sorghum bicolor L. Moench): Consistency across genetic backgrounds and environments ", Theor. Appl. Genet. 101, 733-741 (2000). doi: Http://dx.doi.org/10.1007/s001220051538
9. M. Ashraf, "Inducing drought tolerance in plants: Recent advances ", Biotechnol. Adv. 28, 169-183 (2010). doi: Http://dx.doi.org/10.1016/j.biotechadv.2009.11.005
10. A.K. Joshi, M. Kumari, V.P. Singh, C.M. Reddy, S. Kumar, J. Rane and R. Chand, " Stay green trait: Variation, inheritance and its association with spot blotch resistance in spring wheat (Triticum aestivum L.) " , Euphytica 153, 59-71 (2007). doi: Http://dx.doi.org/10.1007/s10681-006-9235-z
11. K.G. Arriola, S.C. Kim, C.M. Huisden and A.T. Adesogan, " Stay-green ranking and maturity of corn hybrids: 1. Effects on dry matter yield, nutritional value, fermentation characteristics, and aerobic stability of silage hybrids in Florida ", J. Dairy Sci. 95, 964-974 (2012). doi: Http://dx.doi.org/10.3168/jds.2011-4524
12. K.W. Cha Y.J. Lee H.J. Koh B.M. Lee Y.W. Nam N.C. Paek Isolation, characterization, and mapping of the stay green mutant in rice, Theor. Appl. Genet. 104 526-532 2002 http://dx.doi.org/10.1007/s001220100750
13. H. Rong, Y. Tang, H. Zhang, P. Wua, Y. Chen, M. Li, G. Wua and H. Jiang, " The Stay-Green Rice like (SGRL) gene regulates chlorophyll degradation in rice" , J. Plant Physiol. 170, 1367-1373 (2013). doi: Http://dx.doi.org/10.1016/j.jplph.2013.05.016
14. B.G. Osborne, T. Fearn and P.H. Hindle, Practical NIR Spectroscopy with Applications in Food and Beverage Analysis. Longmans Scientific and Technical, Harlow, UK (1993).
15. D.I. Gi vens and E.R. Deaville, " The current and future role of near infrared reflectance spectroscopy in animal nutrition: A review" , Austr. J. Agric. Res. 50, 1131-1145 (1999). doi: Http://dx.doi.org/10.1071/AR98014
16. I. Antal and Á .Z. Dávid, " Fundamentals and pharmaceutical applications of near-infrared spectroscopy" , GLATT International Times (2007).
17. P.W. Gous, A. Martin, W. Lawson, A. Kelly, G.P. Fox and M.W. Sutherland, " Correlation between NIRS generated and chemically measured feed quality data in barley (Hordeum vulgare), and potential use in QTL analysisidentification ", Euphytica 188, 325-332 (2012). doi: Http://dx.doi.org/10.1007/s10681-012-0644-x
18. R.J. Barnes, M.S. Dhanoa and S.J. Lister, "Standard normal variate transformation an d de-trending of near-infrared diffuse reflectance spectra" , Appl. Spectrosc. 43, 772-777 (1989). doi: Http://dx.doi.org/10.1366/0003702894202201
19. A. Szalay, I. Antal, Z. Zsigmond, S. Marton, I. Eros, G. Regdon and K. Pintye-Hodi, " Study on the relationship between particle size and near infrared diffusereflectancespectroscopic data " , Partic. Partic. Syst. Characteriz. 3, 219-222 (2005). doi: Http://dx.doi.org/10.1002/ppsc.200500870
20. B.G. Osborne, " Application of near infrared spectroscopy in quality screening of early-generation material in cereal breeding progammes ", J. Near Infrared Spectrosc. 14, 93-101 (2006). doi: Http://dx.doi.org/10.1255/jnirs.595
21. M.F. Dreccer, L. Barnes and R. Meder, "Quantitative dynamics of stem water soluble carbohydrates in wheat can be monitored in the field using hyperspectral reflectance" , Field Crops Res. 159, 70-80 (2014). doi: Http://dx.doi.org/10.1016/j.fcr.2014.01.001
22. V .B. McGrath, A.B. Blakeney and G.D. Batten, " Fructan to nitrogen ratio as an indicator of nutrient status in wheat crops" , New Phytol. 136, 145-152 (1997). doi: Http://dx.doi.org/10.1111/j.1469-8137.1997.tb04741.x
23. G.D. Batten, A.B. Blakeney, V.B. Mcgrath and S. Ciavarella, " Non-structural carbohydrate: Analysis by near infrared refelecatnce spectroscopy and its importance as an indicator of plant growth ", Plant Soil 155/156, 243-246 (1993). doi: Http://dx.doi.org/10.1007/BF00025029
24. E. Wust and L. Rudzik, "The use of infrared spectroscopy in the dairy industry ", J. Mol. Struct. 661-662, 291-298 (2003). doi: Http://dx.doi.org/10.1016/S0022-2860(03)00514-3
25. J.L.D. Boever, B.G. Cottyn, J.M. Vanacker and C.V. Boucque, " An improved enzymatic method by addinggammanase to determine digestibility and predict energy value of compound feeds and raw materials for cattle ", Anim. Feed Sci. Technol. 47, 1-18 (1994). doi: Http://dx.doi.org/10.1016/0377-8401(94)90155-4
26. G.M. Downes, R. Meder, C. Hicks and N. Ebdon, " Developing and evaluating a multisite and multispecies NIR calibration for the prediction of Kraft pulp yield in eucalypts" , South. For.: J. For. Sci. 71, 155-164 (2009). doi: Http://dx.doi.org/10.2989/sf.2009.71.2.11.826
27. R. Meder, J.T. Brawner, G.M. Downes and N. Ebdon, " Towards the in-forest assessment of Kraft pulp yield: Comparing the performance of laboratory and hand-held instruments and their value in screening breeding trials ", J. Near Infrared Spectrosc. 19, 421-429 (2011). doi: Http://dx.doi.org/10.1255/jnirs.954
28. G.M. Downes, C.E. Harwood, J. Wiedemann, N. Ebdon, H. Bond and R. Meder, " Radial variation in Kraft pulp yield and cellulose content in Eucalyptus globulus wood across three contrasting sites predicted by near infrared spectroscopy ", Can. J. For. Res. 42, 1577-1586 (2012). doi: Http://dx.doi.org/10.1139/x2012-083
29. J.T. Brawner, R. Meder, M.J. Dieters and D.J. Lee, " Selection of Corymbia citriodora for pulp productivity" , South. For.: J. For. Sci. 74, 121-131 (2012).
30. L.T Hickey, W. Lawson, V.N. Arief, G.P. Fox, J. Franckowiak and M.J. Dieters, " Grain dormancy QTL identified in a doubled haploid barley population derived from two non-dormant parents ", Euphytica 188, 113-122 (2012). doi: Http://dx.doi.org/10.1007/s10681-011-0577-9
31. J. Eglinton, Flagship barley (Hordeum vulgare) [Online]. Plant Breeders Rights. http://pericles.ipaustralia.gov.au/pbr-db/plant-detail.cfm?AID=16088571 (2006). Accessed 6 July 2015
32. Anon., "Barley (Hordeum vulgare) 'Flagship' ", Plant Var. J. 21, 47 (2008).
33. J.D. Franckowiak R.D. Horsley S.M. Neate P.B. Schwarz Registration of 'Rawson' barley, J. Plant Regist. 1 37-38, 2007 http://dx.doi.org/10.3198/jpr2006.10.0664crc
34. L.T. Hickey, P.M. Wilkinson, C.R. Knight, I.D. Godwin, O.Y. Kravchuk, E.A.B. Aitken, U.K. Bansal, H.S. Baraina, I.H. Delacy and M.J. Dieters, "Rapid phenotyping for adult-plant resistance to stripe rust in wheat ", Plant Breed. 131, 54-61 (2012). doi: Http://dx.doi.org/10.1111/j.1439-0523.2011.01925.x
35. N.E. Coombes, The Reactive Tabu Search for Efficient Correlated Experimental Designs. Liverpool John Moores University (2002).
36. M. Stapper, "Crop monitoring and zadoks growth stages for wheat ", CSIRO 1-17 (2008).
37. J.L. Black, A.M. Tredrea, S.G. Nielsen, P.C. Flinn, A.G. Kaiser and R.J.V. Barneveld, " Feed uses for barley" , Proceedings 12th Australian Barley Technical Symposium (2005).
38. A. Savitzky and M.J.E. Golay, "Smoothing and differentiation of data by simplified least squares procedures " , Anal. Chem. 36, 1627-1639 (1964). doi: Http://dx.doi.org/10.1021/ac60214a047
39. M. Schwanninger, J.C. Rodrigues and K. Fackler, " A review of band assignments in near infrared spectra of wood and wood components" , J. Near Infrared Spectrosc. 19, 287-308 (2011). doi: Http://dx.doi.org/10.1255/jnirs.955
40. J. Workman and L. Weyer, Practical Guide and Spectral Atlas for Interpretive Near-Infrared Spectroscopy. CRC Press, Boca Raton, FL, USA (2012). doi: Http://dx.doi.org/10.1201/b11894
41. B. Alberts, A. Johnson, J. Lewis, M. Raff, K. Roberts and P. Wallace, Molecular Biology of the Cell. Garland Science New York, USA (2002).
42. M. Kusaba, A. Tanaka and R. Tanaka, "Stay-green plants: What do they tell us about the molecular mechani sm of leaf senescence" , Photosynth. Res. 117, 221-234 (2013). doi: Http://dx.doi.org/10.1007/s11120-013-9862-x