Deciphering the role of POLYCOMB REPRESSIVE COMPLEX1 variants in regulating the acquisition of flowering competence in arabidopsis

Plant Physiology

Volumn 168, Issue 4, 2015, Pages 1286-1297

  Picó, Sara ^a   Ortiz Marchena, M Isabel ^a   Merini, Wiam ^a   Calonje, Myriam ^a  

^a UNIVERSITY OF SEVILLE   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; MOLONEY MURINE LEUKEMIA VIRUS;

ARABIDOPSIS PROTEIN; EMF1 PROTEIN, ARABIDOPSIS; FT PROTEIN, ARABIDOPSIS; MICRORNA; MIRN156 MICRORNA, ARABIDOPSIS; MIRN172 MICRORNA, ARABIDOPSIS; POLYCOMB GROUP PROTEIN;

ARABIDOPSIS; FLOWER; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; PHYSIOLOGY; TRANSGENIC PLANT; UPREGULATION;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; FLOWERS; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, PLANT; MICRORNAS; PLANTS, GENETICALLY MODIFIED; POLYCOMB-GROUP PROTEINS; UP-REGULATION;

EID: 84939127282     PISSN: 00320889     EISSN: 15322548     Source Type: Journal    
DOI: 10.1104/pp.15.00073     Document Type: Article

References (58)

1. Amasino R (2010) Seasonal and developmental timing of flowering. Plant J 61: 1001-1013
2. Aukerman MJ, Sakai H (2003) Regulation of flowering time and floral organ identity by a microRNA and its APETALA2-like target genes. Plant Cell 15: 2730-2741
3. Bouyer D, Roudier F, Heese M, Andersen ED, Gey D, Nowack MK, Goodrich J, Renou JP, Grini PE, Colot V, et al (2011) Polycomb repressive complex 2 controls the embryo-to-seedling phase transition. PLoS Genet 7: e1002014
4. Bratzel F, López-Torrejón G, Koch M, Del Pozo JC, Calonje M (2010) Keeping cell identity in Arabidopsis requires PRC1 RING-finger homologs that catalyze H2A monoubiquitination. Curr Biol 20: 1853-1859
5. Bratzel F, Yang C, Angelova A, López-Torrejón G, Koch M, del Pozo JC, Calonje M (2012) Regulation of the new Arabidopsis imprinted gene AtBMI1C requires the interplay of different epigenetic mechanisms. Mol Plant 5: 260-269
6. Calonje M (2014) PRC1 marks the difference in plant PcG repression. Mol Plant 7: 459-471
7. Calonje M, Sanchez R, Chen L, Sung ZR (2008) EMBRYONIC FLOWER1 participates in Polycomb group-mediated AG gene silencing in Arabidopsis. Plant Cell 20: 277-291
8. Chanvivattana Y, Bishopp A, Schubert D, Stock C, Moon YH, Sung ZR, Goodrich J (2004) Interaction of Polycomb-group proteins controlling flowering in Arabidopsis. Development 131: 5263-5276
9. Chen D, Molitor A, Liu C, Shen WH (2010) The Arabidopsis PRC1-like ring-finger proteins are necessary for repression of embryonic traits during vegetative growth. Cell Res 20: 1332-1344
10. Chen LJ, Diao ZY, Specht C, Sung ZR (2009) Molecular evolution of VEF-domain-containing PcG genes in plants. Mol Plant 2: 738-754
11. Cho HJ, Kim JJ, Lee JH, Kim W, Jung JH, Park CM, Ahn JH (2012) SHORT VEGETATIVE PHASE (SVP) protein negatively regulates miR172 transcription via direct binding to the pri-miR172a promoter in Arabidopsis. FEBS Lett 586: 2332-2337
12. Comet I, Helin K (2014) Revolution in the Polycomb hierarchy. Nat Struct Mol Biol 21: 573-575
13. Derkacheva M, Hennig L (2014) Variations on a theme: Polycomb group proteins in plants. J Exp Bot 65: 2769-2784
14. Derkacheva M, Steinbach Y, Wildhaber T, Mozgová I, Mahrez W, Nanni P, Bischof S, Gruissem W, Hennig L (2013) Arabidopsis MSI1 connects LHP1 to PRC2 complexes. EMBO J 32: 2073-2085
15. Farrona S, Thorpe FL, Engelhorn J, Adrian J, Dong X, Sarid-Krebs L, Goodrich J, Turck F (2011) Tissue-specific expression of FLOWERING LOCUS T in Arabidopsis is maintained independently of Polycomb group protein repression. Plant Cell 23: 3204-3214
16. Haung MD, Yang CH (1998) EMF genes interact with late-flowering genes to regulate Arabidopsis shoot development. Plant Cell Physiol 39: 382-393
17. Huijser P, Schmid M(2011) The control of developmental phase transitions in plants. Development 138: 4117-4129
18. Imaizumi T, Kay SA (2006) Photoperiodic control of flowering: not only by coincidence. Trends Plant Sci 11: 550-558
19. Jiang D,Wang Y, Wang Y, He Y (2008) Repression of FLOWERING LOCUS C and FLOWERING LOCUS T by the Arabidopsis Polycomb repressive complex 2 components. PLoS ONE 3: e3404
20. Jung JH, Seo YH, Seo PJ, Reyes JL, Yun J, Chua NH, Park CM (2007) The GIGANTEA-regulated microRNA172 mediates photoperiodic flowering independent of CONSTANS in Arabidopsis. Plant Cell 19: 2736-2748
21. Kim DH, Sung S (2014) Genetic and epigenetic mechanisms underlying vernalization. The Arabidopsis Book 12: e0171, doi/10.1199/tab.0171
22. Kim JJ, Lee JH, Kim W, Jung HS, Huijser P, Ahn JH (2012a) The microRNA156-SQUAMOSA PROMOTER BINDING PROTEIN-LIKE3 module regulates ambient temperature-responsive flowering via FLOWERING LOCUS T in Arabidopsis. Plant Physiol 159: 461-478
23. Kim SY, Lee J, Eshed-Williams L, Zilberman D, Sung ZR (2012b) EMF1 and PRC2 cooperate to repress key regulators of Arabidopsis development. PLoS Genet 8: e1002512
24. Kim SY, Zhu T, Sung ZR (2010) Epigenetic regulation of gene programs by EMF1 and EMF2 in Arabidopsis. Plant Physiol 152: 516-528
25. Kinoshita T, Harada JJ, Goldberg RB, Fischer RL (2001) Polycomb repression of flowering during early plant development. Proc Natl Acad Sci USA 98: 14156-14161
26. Lafos M, Kroll P, Hohenstatt ML, Thorpe FL, Clarenz O, Schubert D (2011) Dynamic regulation of H3K27 trimethylation during Arabidopsis differentiation. PLoS Genet 7: e1002040
27. Mathieu J, Yant LJ, Mürdter F, Küttner F, Schmid M (2009) Repression of flowering by the miR172 target SMZ. PLoS Biol 7: e1000148
28. Matsoukas IG, Massiah AJ, Thomas B (2012) Florigenic and antiflorigenic signaling in plants. Plant Cell Physiol 53: 1827-1842
29. Merini W, Calonje M (2015) PRC1 is taking the lead in PcG repression. Plant J 83: 110-120
30. Moon YH, Chen L, Pan RL, Chang HS, Zhu T, Maffeo DM, Sung ZR (2003) EMF genes maintain vegetative development by repressing the flower program in Arabidopsis. Plant Cell 15: 681-693
31. Poethig RS (2013) Vegetative phase change and shoot maturation in plants. Curr Top Dev Biol 105: 125-152
32. Pu L, Liu MS, Kim SY, Chen LFO, Fletcher JC, Sung ZR (2013) EMBRYONIC FLOWER1 and ULTRAPETALA1 act antagonistically on Arabidopsis development and stress response. Plant Physiol 162: 812-830
33. Ratcliffe OJ, Kumimoto RW, Wong BJ, Riechmann JL (2003) Analysis of the Arabidopsis MADS AFFECTING FLOWERING gene family: MAF2 prevents vernalization by short periods of cold. Plant Cell 15: 1159-1169
34. Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP (2002) MicroRNAs in plants. Genes Dev 16: 1616-1626
35. Schmid M, Uhlenhaut NH, Godard F, Demar M, Bressan R, Weigel D, Lohmann JU (2003) Dissection of floral induction pathways using global expression analysis. Development 130: 6001-6012
36. Schubert D, Primavesi L, Bishopp A, Roberts G, Doonan J, Jenuwein T, Goodrich J (2006) Silencing by plant Polycomb-group genes requires dispersed trimethylation of histone H3 at lysine 27. EMBO J 25: 4638- 4649
37. Schwartz YB, Pirrotta V (2014) Ruled by ubiquitylation: a new order for Polycomb recruitment. Cell Rep 8: 321-325
38. Schwarz S, Grande AV, Bujdoso N, Saedler H, Huijser P (2008) The microRNA regulated SBP-box genes SPL9 and SPL15 control shoot maturation in Arabidopsis. Plant Mol Biol 67: 183-195
39. Scortecci KC, Michaels SD, Amasino RM (2001) Identification of a MADSbox gene, FLOWERING LOCUS M, that represses flowering. Plant J 26: 229-236
40. Searle I, He Y, Turck F, Vincent C, Fornara F, Kröber S, Amasino RA, Coupland G (2006) The transcription factor FLC confers a flowering response to vernalization by repressing meristem competence and systemic signaling in Arabidopsis. Genes Dev 20: 898-912
41. Shen L, Thong Z, Gong X, Shen Q, Gan Y, Yu H (2014) The putative PRC1 RING-finger protein AtRING1A regulates flowering through repressing MADS AFFECTING FLOWERING genes in Arabidopsis. Development 141: 1303-1312
42. Sung ZR, Belachew A, Shunong B, Bertrand-Garcia R (1992) EMF, an Arabidopsis gene required for vegetative shoot development. Science 258: 1645-1647
43. Suzuki M, Wang HH,McCarty DR (2007) Repression of the LEAFY COTYLEDON 1/B3 regulatory network in plant embryo development by VP1/ABSCISIC ACID INSENSITIVE 3-LIKE B3 genes. Plant Physiol 143: 902-911
44. Turck F, Fornara F, Coupland G (2008) Regulation and identity of florigen: FLOWERING LOCUS T moves center stage. Annu Rev Plant Biol 59: 573-594
45. Turck F, Roudier F, Farrona S, Martin-Magniette ML, Guillaume E, Buisine N, Gagnot S, Martienssen RA, Coupland G, Colot V (2007) Arabidopsis TFL2/LHP1 specifically associates with genes marked by trimethylation of histone H3 lysine 27. PLoS Genet 3: e86
46. Valverde F, Mouradov A, Soppe W, Ravenscroft D, Samach A, Coupland G (2004) Photoreceptor regulation of CONSTANS protein in photoperiodic flowering. Science 303: 1003-1006
47. Wahl V, Ponnu J, Schlereth A, Arrivault S, Langenecker T, Franke A, Feil R, Lunn JE, Stitt M, Schmid M (2013) Regulation of flowering by trehalose-6-phosphate signaling in Arabidopsis thaliana. Science 339: 704-707
48. Wang F, Perry SE (2013) Identification of direct targets of FUSCA3, a key regulator of Arabidopsis seed development. Plant Physiol 161: 1251-1264
49. Wang JW (2014) Regulation of flowering time by the miR156-mediated age pathway. J Exp Bot 65: 4723-4730
50. Wang JW, Czech B, Weigel D (2009) miR156-regulated SPL transcription factors define an endogenous flowering pathway in Arabidopsis thaliana. Cell 138: 738-749
51. Wang Y, Gu X, Yuan W, Schmitz RJ, He Y (2014) Photoperiodic control of the floral transition through a distinct Polycomb repressive complex. Dev Cell 28: 727-736
52. Wigge PA (2011) FT, a mobile developmental signal in plants. Curr Biol 21: R374-R378
53. Wu G, ParkMY, Conway SR,Wang JW, Weigel D, Poethig RS (2009) The sequential action of miR156 and miR172 regulates developmental timing in Arabidopsis. Cell 138: 750-759
54. Wu G, Poethig RS (2006) Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3. Development 133: 3539-3547
55. Yang C, Bratzel F, Hohmann N, KochM, Turck F, Calonje M(2013a) VALand AtBMI1-mediated H2Aub initiate the switch from embryonic to postgerminative growth in Arabidopsis. Curr Biol 23: 1324-1329
56. Yang CH, Chen LJ, Sung ZR (1995) Genetic regulation of shoot development in Arabidopsis: role of the EMF genes. Dev Biol 169: 421-435
57. Yang L, Xu M, Koo Y, He J, Poethig RS (2013b) Sugar promotes vegetative phase change in Arabidopsis thaliana by repressing the expression of MIR156A and MIR156C. eLife 2: e00260
58. Yu S, Cao L, Zhou CM, Zhang TQ, Lian H, Sun Y, Wu J, Huang J, Wang G, Wang JW (2013) Sugar is an endogenous cue for juvenile-to-adult phase transition in plants. eLife 2: e00269