An impedance aptasensor with microfluidic chips for specific detection of H5N1 avian influenza virus

Sensors (Switzerland)

Volumn 15, Issue 8, 2015, Pages 18565-18578

  Lum, Jacob ^a   Wang, Ronghui ^b   Hargis, Billy ^a   Tung, Steve ^b   Bottje, Walter ^a   Lu, Huaguang ^c   Li, Yanbin ^a,b  

^a UNIVERSITY OF ARKANSAS   (United States)

^b University of Arkansas   (United States)

^c PENNSYLVANIA STATE UNIVERSITY   (United States)

Author keywords

Aptamer; Avian influenza virus; Impedance aptasensor; Microfluidic chip; Virus detection

Indexed keywords

ANTIBODIES; CHEMICAL DETECTION; ELECTRODES; FLUIDIC DEVICES; MICROELECTRODES; MONOCLONAL ANTIBODIES; PROTEINS; SCANNING ELECTRON MICROSCOPY; VIRUSES;

APTAMERS; AVIAN INFLUENZA VIRUS; INTERDIGITATED MICROELECTRODES; MICROELECTRODE SURFACES; MICROFLUIDIC CHIP; SENSITIVITY AND SPECIFICITY; SYSTEMATIC EVOLUTION OF LIGANDS BY EXPONENTIAL ENRICHMENTS; VIRUS DETECTION;

MICROFLUIDICS;

APTAMER;

ANIMAL; AVIAN INFLUENZA; BIRD; CHEMISTRY; DEVICES; GENETIC PROCEDURES; IMPEDANCE; INFLUENZA A VIRUS (H5N1); ISOLATION AND PURIFICATION; MICROFLUIDIC ANALYSIS; MICROFLUIDICS; VIROLOGY;

ANIMALS; APTAMERS, NUCLEOTIDE; BIOSENSING TECHNIQUES; BIRDS; ELECTRIC IMPEDANCE; INFLUENZA A VIRUS, H5N1 SUBTYPE; INFLUENZA IN BIRDS; MICROFLUIDIC ANALYTICAL TECHNIQUES; MICROFLUIDICS;

EID: 84938307600     PISSN: 14248220     EISSN: None     Source Type: Journal    
DOI: 10.3390/s150818565     Document Type: Article

References (51)

1. Burns, A.; van der Mensbrugghe, D.; Timmer, H. World Bank Report. Available online: http://siteresources.worldbank.org/EXTAVIANFLU/Resources/EvaluatingAHIeconomics_2008.pdf (accessed on 28 July 2015)
2. World Health Organization. Cumulative Number of Confirmed Human Cases for Avian Influenza A(H5N1) Reported to WHO, 2003–2015. Available online: http://www.who.int/influenza/human_ animal_interface/EN_GIP_20150303cumulativeNumberH5N1cases.pdf(accessed on 3 March 2015)
3. Lu, H.; Lin, L.; Wang, R.; Li, Y.; Scheuchenzuber, B.; Liu, J.; Xie, Z.; Rosebrook, J. Development of H5 subtype-specific monoclonal antibodies (MAb) and MAb-based assays for rapid detection of H5 avian influenza. Health 2012, 4, 923–926
4. Dhumpa, R.; Handberg, K.J.; Jørgensen, P.H.; Yi, S.; Wolff, A.; Bang, D.D. Rapid detection of avian influenza virus in chicken fecal samples by immunomagnetic capture reverse transcriptase-polymerase chain reaction assay. Diagn. Microbiol. Infect. Dis. 2011, 69, 258–265
5. Estmer Nilsson, C.; Abbas, S.; Bennemo, M.; Larsson, A.; Hämäläinen, M.D.; Frostell-Karlsson, Å A novel assay for influenza virus quantification using surface plasmon resonance. Vaccine 2010, 28, 759–766
6. Bai, H.; Wang, R.; Hargis, B.; Lu, H.; Li, Y. A SPR aptasensor for detection of avian influenza virus H5N1. Sensors 2012, 12, 12506–12518
7. Suenaga, E.; Mizuno, H.; Penmetcha, K.K. Monitoring influenza hemagglutinin and glycan interactions using surface plasmon resonance. Biosens. Bioelectron. 2012, 32, 195–201.
8. Kim, S.; Kim, S.; Lee, S.; Park, T.; Byun, K.; Kim, S.; Shuler, M.L. Detection of avian influenza-DNA hybridization using wavelength-scanning surface plasmon resonance biosensor J. Opt. Soc. Korea 2009, 13, 392–397
9. Chang, Y.; Wang, S.; Huang, J.C.; Su, L.; Yao, L.; Li, Y.; Wu, S.; Chen, Y.A.; Hsieh, J.; Chou, C Detection of swine-origin influenza A (H1N1) viruses using a localized surface plasmon coupled fluorescence fiber-optic biosensor. Biosens. Bioelectron. 2010, 26, 1068–1073
10. Peduru Hewa, T.M.; Tannock, G.A.; Mainwaring, D.E.; Harrison, S.; Fecondo, J.V. The detection of influenza A and B viruses in clinical specimens using a quartz crystal microbalance. J. Virol. Methods 2009, 162, 14–21
11. Li, D.; Wang, J.; Wang, R.; Li, Y.; Abi-Ghanem, D.; Berghman, L.; Hargis, B.; Lu, H. A nanobeads amplified QCM immunosensor for the detection of avian influenza virus H5N1. Biosens. Bioelectron 2011, 26, 4146–4154
12. Owen, T.; Al-Kaysi, R.; Bardeen, C.; Cheng, Q. Microgravimetric immunosensor for direct detection of aerosolized influenza A virus particles. Sens. Actuators B Chem. 2007, 126, 691–699
13. Wang, R.; Li, Y. Hydrogel based QCM aptasensor for detection of avian influenza virus Biosens. Bioelectron. 2013, 42, 148–155
14. Nguyen, T.; Ung, T.; Vu, T.; Tran, T.; Dong, V.; Dinh, D.; Nguyen, Q. Fluorescence biosensor based on CdTe quantum dots for specific detection of H5N1 avian influenza virus. Adv. Nat. Sci Nanosci. Nanotechnol. 2012, 3, 1–5
15. Yun, Z.; Zhengtao, D.; Jiachang, Y.; Fangqiong, T.; Qun, W. Using cadmium telluride quantum dots as a proton flux sensor and applying to detect H9 avian influenza virus. Anal. Biochem.2007, 364, 122–127
16. Xu, J.; Suarez, D.; Gottfried, D. Detection of avian influenza virus using an interferometric biosensor. Anal. Bioanal. Chem. 2007, 389, 1193–1199
17. Qi, C.; Tian, X.; Chen, S.; Yan, J.; Cao, Z.; Tian, K.; Gao, G.F.; Jin, G. Detection of avian influenza virus subtype H5 using a biosensor based on imaging ellipsometry. Biosens. Bioelectron. 2010, 25, 1530–1534
18. Lai, W.; Lin, C.; Yang, Y.; Lu, M.S. Ultrasensitive and label-free detection of pathogenic avian influenza DNA by using CMOS impedimetric sensors. Biosens. Bioelectron. 2012, 35, 456–460
19. Diouani, M.F.; Helali, S.; Hafaid, I.; Hassen, W.M.; Snoussi, M.A.; Ghram, A.; Jaffrezic-Renault, N.; Abdelghani, A. Miniaturized biosensor for avian influenza virus detection. Mater. Sci. Eng. C 2008, 28, 580–583
20. Kamikawa, T.L.; Mikolajczyk, M.G.; Kennedy, M.; Zhang, P.; Wang, W.; Scott, D.E.; Alocilja, E.C Nanoparticle-based biosensor for the detection of emerging pandemic influenza strains Biosens. Bioelectron. 2010, 26, 1346–1352
21. Sirko, A.; Zagorski-Ostoja, W.; Radecka, H.; Radecki, J.; Jarocka, U.; Sawicka, R. Electrochemical immunosensor for detection of antibodies against influenza A virus H5N1 in hen serum Biosens. Bioelectron. 2014, 55, 301–306
22. Varshney, M.; Li, Y. Interdigitated array microelectrodes based impedance biosensors for detection of bacterial cells. Biosens. Bioelectron. 2009, 24, 2951–2960
23. Whitesides, G.M. The origins and the future of microfluidics. Nature 2006, 442, 368–373.
24. Niazi, J.H.; Lee, S.J.; Gu, M.B. Single-stranded DNA aptamers specific for antibiotics tetracyclines Bioorganic. Med. Chem. 2008, 16, 7245–7253
25. Schurer, H.; Stembera, K.; Knoll, D.; Mayer, G.; Blind, M.; Forster, H.H.; Famulok, M.; Welzel, P.; Hahn, U. Aptamers that bind to the antibiotic moenomycin A. Bioorganic. Med. Chem. 2001, 9, 2557–2563
26. Cheng, C.; Dong, J.; Yao, L.; Chen, A.; Jia, R.; Huan, L.; Guo, J.; Shu, Y.; Zhang, Z. Potent inhibition of human influenza H5N1 virus by oligonucleotides derived by SELEX. Biochem. Biophys Res. Commun. 2008, 366, 670–674
27. Tang, J.; Yu, T.; Guo, L.; Xie, J.; Shao, N.; He, Z. In vitro selection of DNA aptamer against abrin toxin and aptamer-based abrin direct detection. Biosens. Bioelectron. 2007, 22, 2456–2463
28. Wochner, A.; Menger, M.; Orgel, D.; Cech, B.; Rimmele, M.; Erdmann, V.A.; Glokler, J. A DNA aptamer with high affinity and specificity for therapeutic anthracyclines. Anal. Biochem.2008, 373, 34–42
29. Iliuk, A.B.; Hu, L.; Tao, W.A. Aptamer in bioanalytical applications. Anal. Chem. 2011, 83, 4440–4452
30. Binning, J.M.; Leung, D.W.; Amarasinghe, G.K. Aptamers in virology: Recent advances and challenges. Front. Microbiol. 2012, 3, 29, 1–6
31. Syed, M.A.; Pervaiz, S. Advances in aptamers. Oligonucleotides 2010, 20, 215–224
32. Li, Y.; Hargis, B.; Tung, S.; Berghman, L.; Bottje, W.; Wang, R.; Varshney, M.; Sriniwasan, B.; Ye, Z. Methods and Systems for Detection of Contaminants. U.S. Patent No. 2010/0120016 A1, 13 May 2010
33. Wang, R.; Lin, J.; Lassiter, K.; Srinivasan, B.; Lin, L.; Lu, H.; Tung, S.; Hargis, B.; Bottje, W.; Berghman, L.; et al. Evaluation study of a portable impedance biosensor for detection of avian influenza virus. J. Virol. Methods 2011, 178, 52–58
34. Lum, J.; Wang, R.; Lassiter, K.; Srinivasan, B.; Abi-Ghanem, D.; Berghman, L.; Hargis, B.; Tung, S.; Lu, H.; Li, Y. Rapid detection of avian influenza H5N1 virus using impedance measurement of immuno-reaction coupled with RBC amplification. Biosens. Bioelectron. 2012, 38, 67–73
35. Wang, R.; Wang, Y.; Lassiter, K.; Li, Y.; Hargis, B.; Tung, S.; Berghman, L.; Bottje, W. Interdigitated array microelectrode based impedance immunosensor for detection of avian influenza virus H5N1 Talanta 2009, 79, 159–164
36. Brockman, L.; Wang, R.; Lum, J.; Li, Y. QCM aptasensor for rapid and specific detection of avian influenza virus. Open J. Appl. Biosens. 2013, 2, 97–103
37. Spangler, B.D.; Wilkinson, E.A.; Murphy, J.T.; Tyler, B.J. Comparison of the Spreeta® surface plasmon resonance sensor and a quartz crystal microbalance for detection of Escherichia coli heat-labile enterotoxin. Anal. Chim. Acta 2001, 444, 149–161
38. Fu, Y.; Callaway, Z.; Lum, J.; Wang, R.; Lin, J.; Li, Y. Exploiting enzyme catalysis in ultra-low ion strength media for impedance biosensing of avian influenza virus using a bare interdigitated electrode. Anal. Chem. 2014, 86, 1965–1971
39. Wang, R.; Zhao, J.; Jiang, T.; Kwon, Y.M.; Lu, H.; Jiao, P.; Liao, M.; Li, Y. Selection and characterization of DNA aptamers for use in detection of avian influenza virus H5N1. J. Virol. Methods 2013, 189, 362–369.
40. Wang, R.; Li, Y.; Hargis, B.; Tung, S.; Bottje, W.; Lassiter, K.; Brewer, R.; Sriniwasan, B. Rapid screening of avian influenza virus H5N1 by magnetic nanobeads based microfluidic biosensor In Proceedings of the America Society of Agricultural and Biological Engineers (ASABE) Annual International Meeting, Minneapolis, MN, USA, 17–20 June 2007
41. Goldstein, M.A.; Tauraso, N.M. Effect of formalin, beta-propiolactone, merthiolate, and ultraviolet light upon influenza virus infectivity chicken cell agglutination, hemagglutination, and antigenicity Appl. Microbiol.1970, 19, 290–294
42. Varshney, M.; Li, Y.; Srinivasan, B.; Tung, S. A label-free, microfluidics and interdigitated array microelectrode-based impedance biosensor in combination with nanoparticles immunoseparation for detection of Escherichia coli O157:H7 in food samples. Sens. Actuators B Chem. 2007, 128, 99–107
43. Van Gerwen, P.; Laureyn, W.; Laureys, W.; Huyberechts, G.; de Beeck, O.M.; Baert, K.; Suls, J.; Sansen, W.; Jacobs, P.; Hermans, L. et al. Nanoscaled interdigitated electrode arrays for biochemical sensors. Sens. Actuators B Chem. 1998, 49, 73–80
44. Green, N.M. Avidin. Adv. Protein Chem. 1975, 29, 85–133
45. Huang, X.; Greve, D.W.; Nguyen, D.D.; Domach, M.M. Impedance based biosensor array for monitoring mammalian cell behavior. IEEE Sens. Proc. 2003, 1, 304–309
46. Manickam, A.; Johnson, C.; Kavusi, S.; Hassibi, A. Interface design for CMOS-integrated electrochemical impedance spectroscopy (EIS) biosensors. Sensors 2012, 12, 14467–14488
47. Willner, I.; Zayats, M. Electronic aptamer-based sensors. Angew. Chem. Int. Ed. Engl. 2007, 46, 6408–6418
48. Lin, J.; Wang, R.; Jiao, P.; Li, Y.; Li, Y.; Liao, M.; Yu, Y.; Wang, M. An impedance immunosensor based on low-cost microelectrodes and specific monoclonal antibodies for rapid detection of avian influenza virus H5N1 in chicken swabs. Biosens. Bioelectron. 2015, 67, 546–552
49. Wang, R.; Xu, L.; Li, Y. Bio-nanogate controlled enzymatic reaction for virus sensing Biosens. Bioelectron. 2015, 67, 400–407
50. Shortridge, K.F.; Zhou, N.N.; Guan, Y.; Gao, P.; Ito, T.; Kawaoka, Y.; Kodihalli, S.; Krauss, S.; Markwell, D.; Murti, K.G. et al. Characterization of avian H5N1 influenza viruses from poultry in Hong Kong. Virology 1998, 252, 331–342
51. Wolny, P.; Spatz, J.; Richter, P. On the adsorption behavior of biotin-binding proteins on gold and silica. Langmuir 2010, 26, 1029–1034