-
1
-
-
65049091436
-
Hybridization, polyploidy and invasion: lessons from Spartina (Poaceae)
-
Ainouche M.L., Fortune P.M., Salmon A., Parisod C., Grandbastien M.A., Fukunaga K., Ricou M., Misset M.T. Hybridization, polyploidy and invasion: lessons from Spartina (Poaceae). Biol. Invasions 2009, 11:1159-1173.
-
(2009)
Biol. Invasions
, vol.11
, pp. 1159-1173
-
-
Ainouche, M.L.1
Fortune, P.M.2
Salmon, A.3
Parisod, C.4
Grandbastien, M.A.5
Fukunaga, K.6
Ricou, M.7
Misset, M.T.8
-
2
-
-
84872616689
-
Polyploid evolution in Spartina: dealing with highly redundant hybrid genomes
-
Springer Verlag, Berlin, P.S. Soltis, D.E. Soltis (Eds.)
-
Ainouche M.L., Chelaifa H., Ferreira de Carvalho J., Bellot S., Ainouche A.K., Salmon A. Polyploid evolution in Spartina: dealing with highly redundant hybrid genomes. Polyploidy and Genome Evolution 2012, 225-243. Springer Verlag, Berlin. P.S. Soltis, D.E. Soltis (Eds.).
-
(2012)
Polyploidy and Genome Evolution
, pp. 225-243
-
-
Ainouche, M.L.1
Chelaifa, H.2
Ferreira de Carvalho, J.3
Bellot, S.4
Ainouche, A.K.5
Salmon, A.6
-
3
-
-
84928982166
-
Polyploid speciation and genome evolution: lessons from recent allopolyploids
-
Springer Verlag, Marseilles, P. Pontarotti (Ed.)
-
Ainouche M.L., Wendel J.F. Polyploid speciation and genome evolution: lessons from recent allopolyploids. 17th Evolutiuonary Biology Meeting 2013, 87-113. Springer Verlag, Marseilles. P. Pontarotti (Ed.).
-
(2013)
17th Evolutiuonary Biology Meeting
, pp. 87-113
-
-
Ainouche, M.L.1
Wendel, J.F.2
-
4
-
-
84155164309
-
New grass phylogeny resolves deep evolutionary relationships and discovers C4 origins
-
Aliscioni S., Bell H.L., Besnard G., Christin P.A., Columbus J.T., Duvall M.R., Edwards E.J., Giussani L., Hasenstab-Lehman K., Hilu K.W., Hodkinson T.R., Ingram A.L., Kellog E.A., Mashayekhi S., Morrone O., Osborne C.P., Salamin N., Schaefer H., Spriggs E., Smith S.A., Zuloaga F. New grass phylogeny resolves deep evolutionary relationships and discovers C4 origins. New Phytol. 2012, 193:304-312.
-
(2012)
New Phytol.
, vol.193
, pp. 304-312
-
-
Aliscioni, S.1
Bell, H.L.2
Besnard, G.3
Christin, P.A.4
Columbus, J.T.5
Duvall, M.R.6
Edwards, E.J.7
Giussani, L.8
Hasenstab-Lehman, K.9
Hilu, K.W.10
Hodkinson, T.R.11
Ingram, A.L.12
Kellog, E.A.13
Mashayekhi, S.14
Morrone, O.15
Osborne, C.P.16
Salamin, N.17
Schaefer, H.18
Spriggs, E.19
Smith, S.A.20
Zuloaga, F.21
more..
-
5
-
-
79955603358
-
Plastid gene expression and plant development require a plastidic protein of the mitochondrial transcription termination factor family
-
Babiychuk E., Vandepoele K., Wissing J., Garcia-Diaz M., De Rycke R., Akbari H., Joubes J., Beeckman T., Jansch L., Frentzen M., Van Montagu M.C., Kushnir S. Plastid gene expression and plant development require a plastidic protein of the mitochondrial transcription termination factor family. Proc. Natl. Acad. Sci. USA 2011, 108:6674-6679.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 6674-6679
-
-
Babiychuk, E.1
Vandepoele, K.2
Wissing, J.3
Garcia-Diaz, M.4
De Rycke, R.5
Akbari, H.6
Joubes, J.7
Beeckman, T.8
Jansch, L.9
Frentzen, M.10
Van Montagu, M.C.11
Kushnir, S.12
-
6
-
-
0036355547
-
Molecular phylogeny of hybridizing species from the genus Spartina Schreb. (Poaceae)
-
Baumel A., Ainouche M.L., Bayer R.J., Ainouche A.K., Misset M.T. Molecular phylogeny of hybridizing species from the genus Spartina Schreb. (Poaceae). Mol. Phylogenet. Evol. 2002, 22:303-314.
-
(2002)
Mol. Phylogenet. Evol.
, vol.22
, pp. 303-314
-
-
Baumel, A.1
Ainouche, M.L.2
Bayer, R.J.3
Ainouche, A.K.4
Misset, M.T.5
-
7
-
-
0346721858
-
Genetic evidence for hybridization between the native Spartina maritima and the introduced Spartina alterniflora (Poaceae) in South-West France. Spartina×neyrautii re-examined
-
Baumel A., Ainouche M., Misset M., Gourret J., Bayer R. Genetic evidence for hybridization between the native Spartina maritima and the introduced Spartina alterniflora (Poaceae) in South-West France. Spartina×neyrautii re-examined. Plant Syst. Evol. 2003, 237:87-97.
-
(2003)
Plant Syst. Evol.
, vol.237
, pp. 87-97
-
-
Baumel, A.1
Ainouche, M.2
Misset, M.3
Gourret, J.4
Bayer, R.5
-
8
-
-
79957873740
-
Recent loss of plastid-encoded ndh genes within Erodium (Geraniaceae)
-
Blazier C.J., Guisinguer M.M., Jansen R.K. Recent loss of plastid-encoded ndh genes within Erodium (Geraniaceae). Plant Mol. Biol. 2011, 76:263-272.
-
(2011)
Plant Mol. Biol.
, vol.76
, pp. 263-272
-
-
Blazier, C.J.1
Guisinguer, M.M.2
Jansen, R.K.3
-
9
-
-
43049120571
-
Large multi-gene phylogenetic trees of the grasses (Poaceae): progress towards complete tribal and generic level sampling
-
Bouchenak-Khelladi Y., Salamin N., Savolainen V., Forest F., van der Bank M., Chase M.W., Hodkinson T.R. Large multi-gene phylogenetic trees of the grasses (Poaceae): progress towards complete tribal and generic level sampling. Mol. Phylogenet. Evol. 2008, 47:488-505.
-
(2008)
Mol. Phylogenet. Evol.
, vol.47
, pp. 488-505
-
-
Bouchenak-Khelladi, Y.1
Salamin, N.2
Savolainen, V.3
Forest, F.4
van der Bank, M.5
Chase, M.W.6
Hodkinson, T.R.7
-
10
-
-
77952787167
-
Biogeography of the grasses (Poaceae): a phylogenetic approach to reveal evolutionary history in geographical space and geological time
-
Bouchenak-Khelladi Y., Verboom G.A., Savolainen V., Hodkinson T.R. Biogeography of the grasses (Poaceae): a phylogenetic approach to reveal evolutionary history in geographical space and geological time. Bot. J. Linn. Soc. 2010, 162:543-557.
-
(2010)
Bot. J. Linn. Soc.
, vol.162
, pp. 543-557
-
-
Bouchenak-Khelladi, Y.1
Verboom, G.A.2
Savolainen, V.3
Hodkinson, T.R.4
-
11
-
-
54449090927
-
Does phylogenetic distance between parental genomes governs the success of polyploids?
-
Buggs R.J.A., Soltis P.S., Evgeny V., Mavrodiev V., Symonds V., Soltis D.E. Does phylogenetic distance between parental genomes governs the success of polyploids?. Castanea 2008, 73:74-93.
-
(2008)
Castanea
, vol.73
, pp. 74-93
-
-
Buggs, R.J.A.1
Soltis, P.S.2
Evgeny, V.3
Mavrodiev, V.4
Symonds, V.5
Soltis, D.E.6
-
12
-
-
84900832931
-
Biogeography and phylogenomics of new world bambusoideae (Poaceae), revisited
-
Burke S., Clark L.G., Triplet J.K., Grennan C.P., Duval M.R. Biogeography and phylogenomics of new world bambusoideae (Poaceae), revisited. Am. J. Bot. 2014, 101:886-891.
-
(2014)
Am. J. Bot.
, vol.101
, pp. 886-891
-
-
Burke, S.1
Clark, L.G.2
Triplet, J.K.3
Grennan, C.P.4
Duval, M.R.5
-
13
-
-
0035902443
-
Instability of repetitive DNA sequences: the role of replication in multiple mechanisms
-
Bzymek M., Lovett S.T. Instability of repetitive DNA sequences: the role of replication in multiple mechanisms. Proc. Natl. Acad. Sci. USA 2001, 98:8319-8325.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 8319-8325
-
-
Bzymek, M.1
Lovett, S.T.2
-
14
-
-
77954640413
-
The production of hybrids with high ecological amplitude between exotic Spartina densiflora and native S. maritima in the Iberian Peninsula
-
Castillo J.M., Ayres D.R., Leira-Doce P., Bailey J., Blum M., Strong D.R., Luque T., Figueroa E. The production of hybrids with high ecological amplitude between exotic Spartina densiflora and native S. maritima in the Iberian Peninsula. Divers. Distrib. 2010, 16:547-558.
-
(2010)
Divers. Distrib.
, vol.16
, pp. 547-558
-
-
Castillo, J.M.1
Ayres, D.R.2
Leira-Doce, P.3
Bailey, J.4
Blum, M.5
Strong, D.R.6
Luque, T.7
Figueroa, E.8
-
15
-
-
37549037817
-
Oligocene CO2 decline promoted C4 photosynthesis in grasses
-
Christin P.A., Besnard G., Samaritani E., Duvall M.R., Hodkinson T.R., Savolainen V., Salamin N. Oligocene CO2 decline promoted C4 photosynthesis in grasses. Curr. Biol. 2008, 18:37-43.
-
(2008)
Curr. Biol.
, vol.18
, pp. 37-43
-
-
Christin, P.A.1
Besnard, G.2
Samaritani, E.3
Duvall, M.R.4
Hodkinson, T.R.5
Savolainen, V.6
Salamin, N.7
-
16
-
-
84894513821
-
Molecular dating, evolutionary rates, and the age of the grasses
-
Christin P.A., Spriggs E., Osborne C.P., Strômberg C.A.E., Salamin N., Edwards E.J. Molecular dating, evolutionary rates, and the age of the grasses. Syst. Biol. 2014, 63:153-165.
-
(2014)
Syst. Biol.
, vol.63
, pp. 153-165
-
-
Christin, P.A.1
Spriggs, E.2
Osborne, C.P.3
Strômberg, C.A.E.4
Salamin, N.5
Edwards, E.J.6
-
17
-
-
33749336062
-
The complete chloroplast genome sequence of Pelargonium×hortorum: organization and evolution of the largest and most highly rearranged chloroplast genome of land plants
-
Chumley T.W., Palmer J.D., Mower J.P., Fourcade H.M., Calie P.J., Boore J.L., Jansen R.K. The complete chloroplast genome sequence of Pelargonium×hortorum: organization and evolution of the largest and most highly rearranged chloroplast genome of land plants. Mol. Biol. Evol. 2006, 23:2175-2190.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 2175-2190
-
-
Chumley, T.W.1
Palmer, J.D.2
Mower, J.P.3
Fourcade, H.M.4
Calie, P.J.5
Boore, J.L.6
Jansen, R.K.7
-
18
-
-
84937808905
-
-
onwards. GrassBase - The Online World Grass Flora. London The Board of Trustees, Royal Botanic Gardens, Kew (accessed 14.02.14).
-
Clayton, W.D., Vorontsova, M.S., Harman, K.T., Williamson, H., 2006 onwards. GrassBase - The Online World Grass Flora. London The Board of Trustees, Royal Botanic Gardens, Kew (accessed 14.02.14). http://www%20.kew.org/data/grasses-db.html.
-
(2006)
-
-
Clayton, W.D.1
Vorontsova, M.S.2
Harman, K.T.3
Williamson, H.4
-
19
-
-
0002678292
-
Chloroplast DNA and the study of Plant Phylogeny: present status and future prospects
-
Chapman and Hall, New York, P.S. Soltis, D.E. Soltis, J.F. Doyle (Eds.)
-
Clegg M.T., Zurawski G. Chloroplast DNA and the study of Plant Phylogeny: present status and future prospects. Molecular Systematics of Plants 1992, 1-13. Chapman and Hall, New York. P.S. Soltis, D.E. Soltis, J.F. Doyle (Eds.).
-
(1992)
Molecular Systematics of Plants
, pp. 1-13
-
-
Clegg, M.T.1
Zurawski, G.2
-
20
-
-
51549093541
-
Phylogenetics of chloridoideae (Gramineae): a preliminary study based on nuclear ribosomal internal transcribed spacer and chloroplast trnL-F sequences
-
Columbus J.T., Cerros-Tlatilpa R., Kinney M.S., Siqueiros-Delgado M.E., Bell H.L., Griffith M.P., Refullo-Rodriguez N.F. Phylogenetics of chloridoideae (Gramineae): a preliminary study based on nuclear ribosomal internal transcribed spacer and chloroplast trnL-F sequences. J. Syst. Evolut. Bot. 2007, 23:565-579.
-
(2007)
J. Syst. Evolut. Bot.
, vol.23
, pp. 565-579
-
-
Columbus, J.T.1
Cerros-Tlatilpa, R.2
Kinney, M.S.3
Siqueiros-Delgado, M.E.4
Bell, H.L.5
Griffith, M.P.6
Refullo-Rodriguez, N.F.7
-
21
-
-
0026281937
-
Earliest fossil evidence of grasses in the fossil record
-
Crepet W.L., Feldman G.D. Earliest fossil evidence of grasses in the fossil record. Amer. J. Bot. 1991, 78:1010-1014.
-
(1991)
Amer. J. Bot.
, vol.78
, pp. 1010-1014
-
-
Crepet, W.L.1
Feldman, G.D.2
-
22
-
-
77950931395
-
Dating the origins of polyploidy events
-
Doyle J.F., Egan A.N. Dating the origins of polyploidy events. New Phytol. 2010, 186:73-85.
-
(2010)
New Phytol.
, vol.186
, pp. 73-85
-
-
Doyle, J.F.1
Egan, A.N.2
-
23
-
-
0342859301
-
The two largest chloroplast genome-encoded open reading frames of higher plants are essential genes
-
Drescher A., Ruf S., Calsa T., Carrer H., Bock R. The two largest chloroplast genome-encoded open reading frames of higher plants are essential genes. Plant J. 2000, 22:97-104.
-
(2000)
Plant J.
, vol.22
, pp. 97-104
-
-
Drescher, A.1
Ruf, S.2
Calsa, T.3
Carrer, H.4
Bock, R.5
-
24
-
-
84937773602
-
-
Drummond, A.J., Ashton, B., Buxton, S., Cheung, M., Cooper, A., Heled, J., Kearse, M., Moir, R., Stones-Havas, S., Sturrock, S., Thierer, T., Wilson, A., 2010. Geneious v5.1 . http://www.geneious.com.
-
(2010)
Geneious
, vol.5
, Issue.1
-
-
Drummond, A.J.1
Ashton, B.2
Buxton, S.3
Cheung, M.4
Cooper, A.5
Heled, J.6
Kearse, M.7
Moir, R.8
Stones-Havas, S.9
Sturrock, S.10
Thierer, T.11
Wilson, A.12
-
25
-
-
84864530626
-
Bayesian phylogenetics with BEAUti and the BEAST 1.7
-
Drummond A.J., Suchard M.A., Xie D., Rambaut A. Bayesian phylogenetics with BEAUti and the BEAST 1.7. Mol. Biol. Evol. 2012, 29:1969-1973.
-
(2012)
Mol. Biol. Evol.
, vol.29
, pp. 1969-1973
-
-
Drummond, A.J.1
Suchard, M.A.2
Xie, D.3
Rambaut, A.4
-
26
-
-
13244255415
-
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
-
Edgar R.C. MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 2004, 5:113.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 113
-
-
Edgar, R.C.1
-
27
-
-
79751527987
-
Angiosperm polyploids and their road to evolutionary success
-
Fawcett J., Van de Peer Y. Angiosperm polyploids and their road to evolutionary success. Trends Evol. Biol. 2010, 2:16-21.
-
(2010)
Trends Evol. Biol.
, vol.2
, pp. 16-21
-
-
Fawcett, J.1
Van de Peer, Y.2
-
28
-
-
0031048496
-
Molecular evidence for the maternal parentage in the hybrid origin of Spartina anglica C.E. Hubbard
-
Ferris C., King R.A., Gray A.J. Molecular evidence for the maternal parentage in the hybrid origin of Spartina anglica C.E. Hubbard. Mol Ecol. 1997, 6:185-187.
-
(1997)
Mol Ecol.
, vol.6
, pp. 185-187
-
-
Ferris, C.1
King, R.A.2
Gray, A.J.3
-
29
-
-
84904045737
-
Convergent phylogenetic and functional responses to altered fire regimes in mesic savanna grasslands of North America and South Africa
-
Forrestel E.J., Donoghue M.J., Smith M.D. Convergent phylogenetic and functional responses to altered fire regimes in mesic savanna grasslands of North America and South Africa. New Phytol. 2014, 203:1000-1011.
-
(2014)
New Phytol.
, vol.203
, pp. 1000-1011
-
-
Forrestel, E.J.1
Donoghue, M.J.2
Smith, M.D.3
-
30
-
-
34248999806
-
Evolutionary dynamics of Waxy and the origin of hexaploid Spartina species (Poaceae)
-
Fortune P.M., Schierenbeck K.A., Ainouche A.K., Jacquemin J., Wendel J.F., Ainouche M.L. Evolutionary dynamics of Waxy and the origin of hexaploid Spartina species (Poaceae). Mol. Phylogenet. Evol. 2007, 43:1040-1055.
-
(2007)
Mol. Phylogenet. Evol.
, vol.43
, pp. 1040-1055
-
-
Fortune, P.M.1
Schierenbeck, K.A.2
Ainouche, A.K.3
Jacquemin, J.4
Wendel, J.F.5
Ainouche, M.L.6
-
31
-
-
52649093289
-
The enigmatic invasive Spartina densiflora: a history of hybridizations in a polyploidy context
-
Fortune P.M., Schierenbeck K., Ayres D., Bortolus A., Catrice O., Brown S., Ainouche M.L. The enigmatic invasive Spartina densiflora: a history of hybridizations in a polyploidy context. Mol. Ecol. 2008, 17:4304-4316.
-
(2008)
Mol. Ecol.
, vol.17
, pp. 4304-4316
-
-
Fortune, P.M.1
Schierenbeck, K.2
Ayres, D.3
Bortolus, A.4
Catrice, O.5
Brown, S.6
Ainouche, M.L.7
-
32
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S., Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 2003, 52:696-704.
-
(2003)
Syst. Biol.
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
33
-
-
77649187290
-
Implications of the plastid genome sequence of Typha (Typhaceae, Poales) for understanding genome evolution in Poaceae
-
Guisinger M.M., Chumley T.W., Kuehl J.V., Boore J.L., Jansen R.K. Implications of the plastid genome sequence of Typha (Typhaceae, Poales) for understanding genome evolution in Poaceae. J. Mol. Evol. 2010, 70:149-166.
-
(2010)
J. Mol. Evol.
, vol.70
, pp. 149-166
-
-
Guisinger, M.M.1
Chumley, T.W.2
Kuehl, J.V.3
Boore, J.L.4
Jansen, R.K.5
-
34
-
-
78650446228
-
Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: rearrangements, repeats, and codon usage
-
Guisinger M.M., Kuehl J.V., Boore J.L., Jansen R.K. Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: rearrangements, repeats, and codon usage. Mol. Biol. Evol. 2011, 28:583-600.
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 583-600
-
-
Guisinger, M.M.1
Kuehl, J.V.2
Boore, J.L.3
Jansen, R.K.4
-
35
-
-
0033299905
-
Evolutionary implications of matK indels in Poaceae
-
Hilu K.W., Alice L.A. Evolutionary implications of matK indels in Poaceae. Am. J Bot. 1999, 86(12):1735-1741.
-
(1999)
Am. J Bot.
, vol.86
, Issue.12
, pp. 1735-1741
-
-
Hilu, K.W.1
Alice, L.A.2
-
36
-
-
0034976687
-
A phylogeny of Chloridoideae (Poaceae) based on matK sequences
-
Hilu K.W., Alice L.A. A phylogeny of Chloridoideae (Poaceae) based on matK sequences. Syst. Bot. 2001, 26:386-405.
-
(2001)
Syst. Bot.
, vol.26
, pp. 386-405
-
-
Hilu, K.W.1
Alice, L.A.2
-
37
-
-
37649007931
-
Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns
-
Jansen R.K., Cai Z., Raubeson L.A., Daniell H., Depamphilis C.W., Leebens-Mack J., Muller K.F., Guisinger-Bellian M., Haberle R.C., Hansen A.K., Chumley T.W., Lee S.B., Peery R., McNeal J.R., Kuehl J.V., Boore J.L. Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns. Proc. Natl. Acad. Sci. USA 2007, 104:19369-19374.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 19369-19374
-
-
Jansen, R.K.1
Cai, Z.2
Raubeson, L.A.3
Daniell, H.4
Depamphilis, C.W.5
Leebens-Mack, J.6
Muller, K.F.7
Guisinger-Bellian, M.8
Haberle, R.C.9
Hansen, A.K.10
Chumley, T.W.11
Lee, S.B.12
Peery, R.13
McNeal, J.R.14
Kuehl, J.V.15
Boore, J.L.16
-
39
-
-
79955630390
-
Ancestral polyploidy in seed plants and angiosperms
-
Jiao Y., Wickett N.J., Ayyampalayam S., Chanderbali A.S., Landherr L., Ralph P.E., Tomsho L.P., Hu Y., Liang H., Soltis P.S., Soltis D.E., Clifton S.W., Schlarbaum S.E., Schuster S.C., Ma H., Leebens-Mack J., dePamphilis C.W. Ancestral polyploidy in seed plants and angiosperms. Nature 2011, 473:97-100.
-
(2011)
Nature
, vol.473
, pp. 97-100
-
-
Jiao, Y.1
Wickett, N.J.2
Ayyampalayam, S.3
Chanderbali, A.S.4
Landherr, L.5
Ralph, P.E.6
Tomsho, L.P.7
Hu, Y.8
Liang, H.9
Soltis, P.S.10
Soltis, D.E.11
Clifton, S.W.12
Schlarbaum, S.E.13
Schuster, S.C.14
Ma, H.15
Leebens-Mack, J.16
dePamphilis, C.W.17
-
40
-
-
0037100671
-
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
-
Katoh K., Misawa K., Kuma K., Miyata T. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 2002, 30:3059-3066.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 3059-3066
-
-
Katoh, K.1
Misawa, K.2
Kuma, K.3
Miyata, T.4
-
41
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 1980, 16:111-120.
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
42
-
-
29144475752
-
The tobacco plastid accD gene is essential and is required for leaf development
-
Kode V., Mudd E.A., Iamtham S., Day A. The tobacco plastid accD gene is essential and is required for leaf development. Plant J. 2005, 44:237-244.
-
(2005)
Plant J.
, vol.44
, pp. 237-244
-
-
Kode, V.1
Mudd, E.A.2
Iamtham, S.3
Day, A.4
-
43
-
-
0002909895
-
Inverted repeats in chloroplast DNA from higher plants
-
Kolodner R., Tewari K.K. Inverted repeats in chloroplast DNA from higher plants. Proc. Natl. Acad. Sci. USA 1979, 76:41-45.
-
(1979)
Proc. Natl. Acad. Sci. USA
, vol.76
, pp. 41-45
-
-
Kolodner, R.1
Tewari, K.K.2
-
44
-
-
0035890910
-
REPuter: the manifold applications of repeat analysis on a genomic scale
-
Kurtz S., Choudhuri J.V., Ohlebusch E., Schleiermacher C., Stoye J., Giegerich R. REPuter: the manifold applications of repeat analysis on a genomic scale. Nucleic Acids Res. 2001, 29:4633-4642.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 4633-4642
-
-
Kurtz, S.1
Choudhuri, J.V.2
Ohlebusch, E.3
Schleiermacher, C.4
Stoye, J.5
Giegerich, R.6
-
45
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead B., Trapnell C., Pop M., Salzberg S.L. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 2009, 10:R25.
-
(2009)
Genome Biol.
, vol.10
, pp. R25
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
46
-
-
84883584463
-
OrganellarGenomeDRAW - a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets
-
Lohse M., Drechsel O., Kahlau S., Bock R. OrganellarGenomeDRAW - a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets. Nucleic Acids Res. 2013, 41:W575-W581.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. W575-W581
-
-
Lohse, M.1
Drechsel, O.2
Kahlau, S.3
Bock, R.4
-
47
-
-
85027474551
-
Evolution in Spartina (Gramineae): I. The history and morphology of the genus in Britain
-
Marchant C. Evolution in Spartina (Gramineae): I. The history and morphology of the genus in Britain. Bot. J. Linn. Soc. 1967, 60:1-24.
-
(1967)
Bot. J. Linn. Soc.
, vol.60
, pp. 1-24
-
-
Marchant, C.1
-
48
-
-
0000321560
-
Evolution in Spartina (Gramineae). II. Chromosomes, basic relationships, and the problem of S. × townsendii agg
-
Marchant C.J. Evolution in Spartina (Gramineae). II. Chromosomes, basic relationships, and the problem of S. × townsendii agg. Bot. J. Linn. Soc. 1968, 60:381-409.
-
(1968)
Bot. J. Linn. Soc.
, vol.60
, pp. 381-409
-
-
Marchant, C.J.1
-
49
-
-
84901405949
-
The first complete chloroplast genome of the Genistoid legume Lupinus luteus: evidence for a novel major lineage-specific rearrangement and new insights regarding plastome evolution in the legume family
-
Martin G.E., Rousseau-Gueutin M., Cordonnier S., Lima O., Michon-Coudouel S., Naquin D., de Carvalho J.F., Ainouche M., Salmon A., Ainouche A. The first complete chloroplast genome of the Genistoid legume Lupinus luteus: evidence for a novel major lineage-specific rearrangement and new insights regarding plastome evolution in the legume family. Ann. Bot. 2014, 113:1197-1210.
-
(2014)
Ann. Bot.
, vol.113
, pp. 1197-1210
-
-
Martin, G.E.1
Rousseau-Gueutin, M.2
Cordonnier, S.3
Lima, O.4
Michon-Coudouel, S.5
Naquin, D.6
de Carvalho, J.F.7
Ainouche, M.8
Salmon, A.9
Ainouche, A.10
-
50
-
-
33646393047
-
Reticulate evolution in higher plants
-
CABI publishing, Wallingford, R. Henry (Ed.)
-
McKinnon G. Reticulate evolution in higher plants. Plant Diversity and Evolution 2004, 81-96. CABI publishing, Wallingford. R. Henry (Ed.).
-
(2004)
Plant Diversity and Evolution
, pp. 81-96
-
-
McKinnon, G.1
-
51
-
-
84897556789
-
Sequencing of chloroplast genomes from wheat, barley, rye and their relatives provides a detailed insight into the evolution of the Triticeae tribe
-
Middleton C.P., Senerchia N., Stein N., Akhunov E.D., Keller B., Wicker T., Kilian B. Sequencing of chloroplast genomes from wheat, barley, rye and their relatives provides a detailed insight into the evolution of the Triticeae tribe. PLoS ONE 2014, 9:e85761.
-
(2014)
PLoS ONE
, vol.9
, pp. e85761
-
-
Middleton, C.P.1
Senerchia, N.2
Stein, N.3
Akhunov, E.D.4
Keller, B.5
Wicker, T.6
Kilian, B.7
-
52
-
-
0001625557
-
Taxonomy and distribution of the genus Spartina
-
Mobberley D. Taxonomy and distribution of the genus Spartina. Iowa State Coll. J. Sci. 1956, 30:471-574.
-
(1956)
Iowa State Coll. J. Sci.
, vol.30
, pp. 471-574
-
-
Mobberley, D.1
-
53
-
-
77949494249
-
Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots
-
Moore M.J., Soltis P.S., Bell C.D., Burleigh J.G., Soltis D.E. Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots. Proc. Natl. Acad. Sci. USA 2010, 107:4623-4628.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 4623-4628
-
-
Moore, M.J.1
Soltis, P.S.2
Bell, C.D.3
Burleigh, J.G.4
Soltis, D.E.5
-
54
-
-
84937790462
-
-
Paradis, E., Bolker, B., Claude, J., et al., 2011. Package 'ape'. . http://cran.r-project.org/web/packages/ape/ape.pdf.
-
(2011)
Package
-
-
Paradis, E.1
Bolker, B.2
Claude, J.3
-
56
-
-
77950029210
-
A classification of the Chloridoideae (Poaceae) based on multi-gene phylogenetic trees
-
Peterson P.M., Romaschenko K., Johnson G. A classification of the Chloridoideae (Poaceae) based on multi-gene phylogenetic trees. Mol. Phylogenet. Evol. 2010, 55:580-598.
-
(2010)
Mol. Phylogenet. Evol.
, vol.55
, pp. 580-598
-
-
Peterson, P.M.1
Romaschenko, K.2
Johnson, G.3
-
57
-
-
78049289107
-
A phylogeny and classification of the Muhlenbergiinae (Poaceae: Chloridoideae: Cynodonteae) based on plastid and nuclear DNA sequences
-
Peterson P.M., Romaschenko K., Johnson G. A phylogeny and classification of the Muhlenbergiinae (Poaceae: Chloridoideae: Cynodonteae) based on plastid and nuclear DNA sequences. Am. J. Bot. 2010, 97:1532-1554.
-
(2010)
Am. J. Bot.
, vol.97
, pp. 1532-1554
-
-
Peterson, P.M.1
Romaschenko, K.2
Johnson, G.3
-
58
-
-
80052240085
-
Centropodieae and Ellisochloa, a new tribe and genus in the Chloridoideae (Poaceae)
-
Peterson P.M., Romaschenko K., Barker N.P., Linder H.P. Centropodieae and Ellisochloa, a new tribe and genus in the Chloridoideae (Poaceae). Taxon 2011, 60:1113-1122.
-
(2011)
Taxon
, vol.60
, pp. 1113-1122
-
-
Peterson, P.M.1
Romaschenko, K.2
Barker, N.P.3
Linder, H.P.4
-
59
-
-
84861648746
-
A molecular phylogeny and classification of Leptochloa (Poaceae: Chloridoideae: Chlorideae) sensu lato and related genera
-
Peterson P.M., Romaschenko K., Snow N., Johnson G. A molecular phylogeny and classification of Leptochloa (Poaceae: Chloridoideae: Chlorideae) sensu lato and related genera. Ann. Bot. 2012, 109:1317-1330.
-
(2012)
Ann. Bot.
, vol.109
, pp. 1317-1330
-
-
Peterson, P.M.1
Romaschenko, K.2
Snow, N.3
Johnson, G.4
-
60
-
-
84900031563
-
A molecular phylogeny and classification of the Cteniinae, Farragininae, Gouiniinae, Gymnopogoninae, Perotidinae, and Trichoneurinae (Poaceae: Chloridoideae: Cynodonteae)
-
Peterson P.M., Romaschenko K., Herrera A.Y. A molecular phylogeny and classification of the Cteniinae, Farragininae, Gouiniinae, Gymnopogoninae, Perotidinae, and Trichoneurinae (Poaceae: Chloridoideae: Cynodonteae). Taxon 2014, 63:275-286.
-
(2014)
Taxon
, vol.63
, pp. 275-286
-
-
Peterson, P.M.1
Romaschenko, K.2
Herrera, A.Y.3
-
61
-
-
84919718705
-
A molecular phylogeny and subgeneric classification of Sporobolus (Poaceae: Chloridoideae: Sprobolineae)
-
Peterson P.M., Romaschenko K., Herrera A.Y., Saarela J.M. A molecular phylogeny and subgeneric classification of Sporobolus (Poaceae: Chloridoideae: Sprobolineae). Taxon 2014, 63:1212-1243.
-
(2014)
Taxon
, vol.63
, pp. 1212-1243
-
-
Peterson, P.M.1
Romaschenko, K.2
Herrera, A.Y.3
Saarela, J.M.4
-
62
-
-
84919766502
-
Proposal to conserve Sporobolus against Spartina, Crypsis, Ponceletia, and Heleochloa (Poaceae: Chloridoideae: Sporobolinae)
-
Peterson P.M., Romaschenko K., Herrera A.Y., Saarela J.M. Proposal to conserve Sporobolus against Spartina, Crypsis, Ponceletia, and Heleochloa (Poaceae: Chloridoideae: Sporobolinae). Taxon 2014, 63:1373-1374.
-
(2014)
Taxon
, vol.63
, pp. 1373-1374
-
-
Peterson, P.M.1
Romaschenko, K.2
Herrera, A.Y.3
Saarela, J.M.4
-
63
-
-
0020374743
-
What is Spartina maritima doing in our estuaries?
-
Pierce S.M. What is Spartina maritima doing in our estuaries?. S. Afr. J. Sci. 1982, 78:229-230.
-
(1982)
S. Afr. J. Sci.
, vol.78
, pp. 229-230
-
-
Pierce, S.M.1
-
64
-
-
45849154165
-
JModelTest: phylogenetic model averaging
-
Posada D. JModelTest: phylogenetic model averaging. Mol. Biol. Evol. 2008, 25:1253-1256.
-
(2008)
Mol. Biol. Evol.
, vol.25
, pp. 1253-1256
-
-
Posada, D.1
-
65
-
-
27944489518
-
Dinosaur coprolites and the early evolution of grasses and grazers
-
Prasad V., Strömberg C.A.E., Alimohammadian H., Sahni A. Dinosaur coprolites and the early evolution of grasses and grazers. Science 2005, 310:1177-1180.
-
(2005)
Science
, vol.310
, pp. 1177-1180
-
-
Prasad, V.1
Strömberg, C.A.E.2
Alimohammadian, H.3
Sahni, A.4
-
66
-
-
80053395450
-
Late Cretaceous origin of the rice tribe provides evidence for early diversification in Poaceae
-
Prasad V., Stromberg C.A., Leache A.D., Samant B., Patnaik R., Tang L., Mohabey D.M., Ge S., Sahni A. Late Cretaceous origin of the rice tribe provides evidence for early diversification in Poaceae. Nat. Commun. 2011, 2:480.
-
(2011)
Nat. Commun.
, vol.2
, pp. 480
-
-
Prasad, V.1
Stromberg, C.A.2
Leache, A.D.3
Samant, B.4
Patnaik, R.5
Tang, L.6
Mohabey, D.M.7
Ge, S.8
Sahni, A.9
-
67
-
-
0026399989
-
The evolution of Spartina anglica CE Hubbard: variation and status of the parental species in Brittain
-
Raybould A.F., Gray A.J., Lawrence M.J., Marshall D.F. The evolution of Spartina anglica CE Hubbard: variation and status of the parental species in Brittain. Biol. J. Linn. Soc. 1991, 44:369-380.
-
(1991)
Biol. J. Linn. Soc.
, vol.44
, pp. 369-380
-
-
Raybould, A.F.1
Gray, A.J.2
Lawrence, M.J.3
Marshall, D.F.4
-
68
-
-
82755171705
-
Conservation of plastid sequences in the plant nuclear genome for millions of years facilitates endosymbiotic evolution
-
Rousseau-Gueutin M., Ayliffe M.A., Timmis J.N. Conservation of plastid sequences in the plant nuclear genome for millions of years facilitates endosymbiotic evolution. Plant Physiol. 2011, 157:2181-2193.
-
(2011)
Plant Physiol.
, vol.157
, pp. 2181-2193
-
-
Rousseau-Gueutin, M.1
Ayliffe, M.A.2
Timmis, J.N.3
-
69
-
-
84875710723
-
Potential functional replacement of the plastidic acetyl-CoA carboxylase subunit (accD) gene by recent transfers to the nucleus in some angiosperm lineages
-
Rousseau-Gueutin M., Huang X., Higginson E., Ayliffe M., Day A., Timmis J.N. Potential functional replacement of the plastidic acetyl-CoA carboxylase subunit (accD) gene by recent transfers to the nucleus in some angiosperm lineages. Plant Physiol. 2013, 161:1918-1929.
-
(2013)
Plant Physiol.
, vol.161
, pp. 1918-1929
-
-
Rousseau-Gueutin, M.1
Huang, X.2
Higginson, E.3
Ayliffe, M.4
Day, A.5
Timmis, J.N.6
-
70
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
Rozen S., Skaletsky H. Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 2000, 132:365-386.
-
(2000)
Methods Mol. Biol.
, vol.132
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.2
-
71
-
-
34250767339
-
Comparison of whole chloroplast genome sequences to choose noncoding regions for phylogenetic studies in angiosperms: the tortoise and the hare III
-
Shaw J., Lickey E.B., Schilling E.E., Small R.L. Comparison of whole chloroplast genome sequences to choose noncoding regions for phylogenetic studies in angiosperms: the tortoise and the hare III. Am. J. Bot. 2007, 94:275-288.
-
(2007)
Am. J. Bot.
, vol.94
, pp. 275-288
-
-
Shaw, J.1
Lickey, E.B.2
Schilling, E.E.3
Small, R.L.4
-
72
-
-
84908402705
-
Chloroplast DNA sequence utility for the lowest phylogenetic and phylogeographic inferences in angiosperms: the tortoise and the hare IV
-
Shaw J., Shafer H.L., Leonard O.R., Kovach M.J., Schorr M., Morris A.B. Chloroplast DNA sequence utility for the lowest phylogenetic and phylogeographic inferences in angiosperms: the tortoise and the hare IV. Am. J. Bot. 2014, 101:1987-2004.
-
(2014)
Am. J. Bot.
, vol.101
, pp. 1987-2004
-
-
Shaw, J.1
Shafer, H.L.2
Leonard, O.R.3
Kovach, M.J.4
Schorr, M.5
Morris, A.B.6
-
73
-
-
9944236936
-
Tidal regime, salinity and salt mash plant zonation
-
Silvestri S., Defina A., Marani M. Tidal regime, salinity and salt mash plant zonation. Estuar. Coast. Shelf Sci. 2005, 62:119-130.
-
(2005)
Estuar. Coast. Shelf Sci.
, vol.62
, pp. 119-130
-
-
Silvestri, S.1
Defina, A.2
Marani, M.3
-
74
-
-
84879320097
-
Phylogeny of the Bouteloua curtipendula complex (Poaceae: Chloridoideae) based on nuclear ribosomal and plastid DNA sequences from diploid taxa
-
Siqueiros-Delgado M.E., Ainouche M., Columbus J.T., Ainouche A. Phylogeny of the Bouteloua curtipendula complex (Poaceae: Chloridoideae) based on nuclear ribosomal and plastid DNA sequences from diploid taxa. Syst. Bot. 2013, 38:379-389.
-
(2013)
Syst. Bot.
, vol.38
, pp. 379-389
-
-
Siqueiros-Delgado, M.E.1
Ainouche, M.2
Columbus, J.T.3
Ainouche, A.4
-
75
-
-
0347352354
-
Recent and recurrent polyploidy in Tragopogon (Asteraceae): cytogenetic, genomic and genetic comparisons
-
Soltis D.E., Soltis P.S., Pires J.C., Kovarik A., Tate J.A., Mavrodiev E. Recent and recurrent polyploidy in Tragopogon (Asteraceae): cytogenetic, genomic and genetic comparisons. Bot. J. Linn. Soc. 2004, 82:485-501.
-
(2004)
Bot. J. Linn. Soc.
, vol.82
, pp. 485-501
-
-
Soltis, D.E.1
Soltis, P.S.2
Pires, J.C.3
Kovarik, A.4
Tate, J.A.5
Mavrodiev, E.6
-
76
-
-
84930241742
-
A worldwide phylogenetic classification of the Poaceae (Gramineae)
-
Soreng R.J., Peterson P.M., Romaschenko K., Davidse F.O., Zuloaga G., Judziewicz E.J., Filgueiras T.S., Davis J.I., Morrone O. A worldwide phylogenetic classification of the Poaceae (Gramineae). J. Syst. Evol. 2015, 53:117-137.
-
(2015)
J. Syst. Evol.
, vol.53
, pp. 117-137
-
-
Soreng, R.J.1
Peterson, P.M.2
Romaschenko, K.3
Davidse, F.O.4
Zuloaga, G.5
Judziewicz, E.J.6
Filgueiras, T.S.7
Davis, J.I.8
Morrone, O.9
-
77
-
-
84901295043
-
C4 photosynthesis promoted species diversification during the miocene grassland expansion
-
Spriggs E.L., Christin P.A., Edwards E.J. C4 photosynthesis promoted species diversification during the miocene grassland expansion. PLoS One 2014, 9:e97722.
-
(2014)
PLoS One
, vol.9
, pp. e97722
-
-
Spriggs, E.L.1
Christin, P.A.2
Edwards, E.J.3
-
78
-
-
84888628189
-
Ecological and evolutionary misadventures of Spartina
-
Strong D.R., Ayres D.R. Ecological and evolutionary misadventures of Spartina. Annu. Rev. Ecol. Evol. Syst. 2013, 44:389-410.
-
(2013)
Annu. Rev. Ecol. Evol. Syst.
, vol.44
, pp. 389-410
-
-
Strong, D.R.1
Ayres, D.R.2
-
79
-
-
77649331120
-
Phylogenetic relationships and natural hybridization among the North American woody bamboos (Poaceae: Bambusoideae: Arundinaria)
-
Triplett J.K., Oltrogge K.A., Clark L.G. Phylogenetic relationships and natural hybridization among the North American woody bamboos (Poaceae: Bambusoideae: Arundinaria). Am. J. Bot. 2010, 97:471-492.
-
(2010)
Am. J. Bot.
, vol.97
, pp. 471-492
-
-
Triplett, J.K.1
Oltrogge, K.A.2
Clark, L.G.3
-
80
-
-
56349160134
-
The age of the grasses and clusters of origins of C4 photosynthesis
-
Vicentini A., Barber J.C., Aliscioni A.A., Giussani L.M., Kellogg E.A. The age of the grasses and clusters of origins of C4 photosynthesis. Glob. Change Biol. 2008, 14:2693-2977.
-
(2008)
Glob. Change Biol.
, vol.14
, pp. 2693-2977
-
-
Vicentini, A.1
Barber, J.C.2
Aliscioni, A.A.3
Giussani, L.M.4
Kellogg, E.A.5
-
81
-
-
33646155173
-
Polyploidy and evolution in plants
-
CABI Publishing, Wallington, U.K. R.J. Henry (Ed.)
-
Wendel J.F., Doyle J.J. Polyploidy and evolution in plants. Plant Diversity and Evolution 2005, 97-117. CABI Publishing, Wallington, U.K. R.J. Henry (Ed.).
-
(2005)
Plant Diversity and Evolution
, pp. 97-117
-
-
Wendel, J.F.1
Doyle, J.J.2
-
82
-
-
84895762952
-
Reconstruction of the ancestral plastid genome in geraniaceae reveals a correlation between genome rearrangements, repeats, and nucleotide substitution rates
-
Weng M.L., Blazier J.C., Govindu M., Jansen R.K. Reconstruction of the ancestral plastid genome in geraniaceae reveals a correlation between genome rearrangements, repeats, and nucleotide substitution rates. Mol. Biol. Evol. 2014, 31:645-659.
-
(2014)
Mol. Biol. Evol.
, vol.31
, pp. 645-659
-
-
Weng, M.L.1
Blazier, J.C.2
Govindu, M.3
Jansen, R.K.4
-
83
-
-
79957927000
-
The evolution of the plastid chromosome in land plants: gene content, gene order, gene function
-
Wicke S., Schneeweiss G.M., de Pamphilis C.W., Müller K.F., Quandt D. The evolution of the plastid chromosome in land plants: gene content, gene order, gene function. Plant Mol. Biol. 2011, 76:273-297.
-
(2011)
Plant Mol. Biol.
, vol.76
, pp. 273-297
-
-
Wicke, S.1
Schneeweiss, G.M.2
de Pamphilis, C.W.3
Müller, K.F.4
Quandt, D.5
-
84
-
-
83655203406
-
The phylogeny of the BEP clade in grasses revisited: evidence from the whole-genome sequences of chloroplasts
-
Wu Z.Q., Ge S. The phylogeny of the BEP clade in grasses revisited: evidence from the whole-genome sequences of chloroplasts. Mol. Phylogenet. Evol. 2012, 62:573-578.
-
(2012)
Mol. Phylogenet. Evol.
, vol.62
, pp. 573-578
-
-
Wu, Z.Q.1
Ge, S.2
-
85
-
-
10244240599
-
Automatic annotation of organellar genomes with DOGMA
-
Wyman S.K., Jansen R.K., Boore J.L. Automatic annotation of organellar genomes with DOGMA. Bioinformatics 2004, 20:3252-3255.
-
(2004)
Bioinformatics
, vol.20
, pp. 3252-3255
-
-
Wyman, S.K.1
Jansen, R.K.2
Boore, J.L.3
-
86
-
-
84906826899
-
A multi-step comparison of short-read full plastome sequence assembly methods in grasses
-
Wysocki W.P., Clark L.G., Kelchner S.A., Burke S.V., Pires J.C., Edger P.P., Mayfield D.R., Triplett J.K., Columbus J.T., Ingram A.L., Duvall M.R. A multi-step comparison of short-read full plastome sequence assembly methods in grasses. Taxon 2014, 63:899-910.
-
(2014)
Taxon
, vol.63
, pp. 899-910
-
-
Wysocki, W.P.1
Clark, L.G.2
Kelchner, S.A.3
Burke, S.V.4
Pires, J.C.5
Edger, P.P.6
Mayfield, D.R.7
Triplett, J.K.8
Columbus, J.T.9
Ingram, A.L.10
Duvall, M.R.11
-
87
-
-
33845887966
-
Pattern and rate of indel evolution inferred from whole chloroplast intergenic regions in sugarcane, maize and rice
-
Yamane K., Yano K., Kawahara T. Pattern and rate of indel evolution inferred from whole chloroplast intergenic regions in sugarcane, maize and rice. DNA Res. 2006, 13:197-204.
-
(2006)
DNA Res.
, vol.13
, pp. 197-204
-
-
Yamane, K.1
Yano, K.2
Kawahara, T.3
-
88
-
-
0033979433
-
Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models
-
Yang Z., Nielsen R. Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models. Mol. Biol. Evol. 2000, 17:32-43.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 32-43
-
-
Yang, Z.1
Nielsen, R.2
-
89
-
-
34547803197
-
PAML 4: phylogenetic analysis by maximum likelihood
-
Yang Z. PAML 4: phylogenetic analysis by maximum likelihood. Mol. Biol. Evol. 2007, 24:1586-1591.
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1586-1591
-
-
Yang, Z.1
-
90
-
-
0347982617
-
Uniformity of the nuclear and chloroplast genomes of Spartina maritima (Poaceae), a salt-marsh species in decline along the Western European Coast
-
Yannic G., Baumel A., Ainouche M. Uniformity of the nuclear and chloroplast genomes of Spartina maritima (Poaceae), a salt-marsh species in decline along the Western European Coast. Heredity (Edinb) 2004, 93:182-188.
-
(2004)
Heredity (Edinb)
, vol.93
, pp. 182-188
-
-
Yannic, G.1
Baumel, A.2
Ainouche, M.3
-
91
-
-
79957814250
-
High-throughput sequencing of six bamboo chloroplast genomes: phylogenetic implications for temperate woody bamboos (Poaceae: Bambusoideae)
-
Zhang Y.J., Ma P.F., Li D.Z. High-throughput sequencing of six bamboo chloroplast genomes: phylogenetic implications for temperate woody bamboos (Poaceae: Bambusoideae). PLoS ONE 2011, 6:e20596.
-
(2011)
PLoS ONE
, vol.6
, pp. e20596
-
-
Zhang, Y.J.1
Ma, P.F.2
Li, D.Z.3
|