Filifactor alocis - a new emerging periodontal pathogen

Microbes and Infection

Volumn 17, Issue 7, 2015, Pages 517-530

  Aruni, A Wilson ^a   Mishra, Arunima ^a   Dou, Yuetan ^a   Chioma, Ozioma ^a   Hamilton, Brittany N ^a   Fletcher, Hansel M ^a,b  

^a LOMA LINDA UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b Kyung Hee University   (South Korea)

Author keywords

Community dynamics; Filifactor alocis; Periodontitis; Polymicrobial infection

Indexed keywords

CRISPR ASSOCIATED PROTEIN; MICROBIAL SURFACE COMPONENT RECOGNIZING ADHESIVE MATRIX MOLECULE; PROTEINASE; UNCLASSIFIED DRUG; VIRULENCE FACTOR;

AMINO ACID METABOLISM; ANAEROBIC BACTERIUM; ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIUM ADHERENCE; BIOFILM; CULTURAL FACTOR; DISEASE COURSE; FILIFACTOR ALOCIS; GRAM POSITIVE BACTERIUM; HOST CELL; HUMAN; INCIDENCE; MICROMORPHOLOGY; MODULATION; NONHUMAN; OXIDATIVE STRESS; PERIODONTAL DISEASE; PRIORITY JOURNAL; FIRMICUTES; IMMUNOLOGY; PATHOGENICITY; PATHOLOGY; PERIODONTITIS; PHYSIOLOGY; STOMATOLOGY;

FILIFACTOR ALOCIS; POSIBACTERIA;

BACTERIA, ANAEROBIC; BACTERIAL ADHESION; FIRMICUTES; HUMANS; ORAL MEDICINE; OXIDATIVE STRESS; PERIODONTITIS;

EID: 84937641804     PISSN: 12864579     EISSN: 1769714X     Source Type: Journal    
DOI: 10.1016/j.micinf.2015.03.011     Document Type: Article

References (62)

1. Thornton-Evans G., Eke P., Wei L., Palmer A., Moeti R., Hutchins S., et al. Periodontitis among adults aged ≥30 years - United States, 2009-2010 2013, 62(Suppl. 3):129-135.
2. Genco R.J., Van Dyke T.E. Prevention: reducing the risk of CVD in patients with periodontitis. Nat Rev Cardiol 2010, 7:479-480.
3. Bingham C.O., Moni M. Periodontal disease and rheumatoid arthritis: the evidence accumulates for complex pathobiologic interactions. Curr Opin Rheumatol 2013, 25:345-353.
4. Poole S., Singhrao S.K., Kesavalu L., Curtis M.A., Crean S. Determining the presence of periodontopathic virulence factors in short-term postmortem Alzheimer's disease brain tissue. J Alzheimers Dis 2013, 36:665-677.
5. Belstrom D., Fiehn N.E., Nielsen C.H., Kirkby N., Twetman S., Klepac-Ceraj V., et al. Differences in bacterial saliva profile between periodontitis patients and a control cohort. J Clin Periodontol 2014, 41:104-112.
6. Dewhirst F.E., Chen T., Izard J., Paster B.J., Tanner A.C., Yu W.H., et al. The human oral microbiome. J Bacteriol 2010, 192:5002-5017.
7. Griffen A.L., Beall C.J., Campbell J.H., Firestone N.D., Kumar P.S., Yang Z.K., et al. Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing. ISME J 2012, 6:1176-1185.
8. Aruni W., Chioma O., Fletcher H.M. Filifactor alocis: the newly discovered kid on the block with special talents. J Dent Res 2014, 93:725-732.
9. Kumar P.S., Leys E.J., Bryk J.M., Martinez F.J., Moeschberger M.L., Griffen A.L. Changes in periodontal health status are associated with bacterial community shifts as assessed by quantitative 16S cloning and sequencing. J Clin Microbiol 2006, 44:3665-3673.
10. Gomes B.P., Jacinto R.C., Pinheiro E.T., Sousa E.L., Zaia A.A., Ferraz C.C., et al. Molecular analysis of Filifactor alocis, Tannerella forsythia, and Treponema denticola associated with primary endodontic infections and failed endodontic treatment. J Endod 2006, 32:937-940.
11. Zhang C., Hou B.X., Zhao H.Y., Sun Z. Microbial diversity in failed endodontic root-filled teeth. Chin Med J Engl 2012, 125:1163-1168.
12. Tamura N., Ochi M., Miyakawa H., Nakazawa F. Analysis of bacterial flora associated with peri-implantitis using obligate anaerobic culture technique and 16S rDNA gene sequence. Int J Oral Maxillofac Implants 2013, 28:1521-1529.
13. Jalava J., Eerola E. Phylogenetic analysis of Fusobacterium alocis and Fusobacterium sulci based on 16S rRNA gene sequences: proposal of Filifactor alocis (Cato, Moore and Moore) comb. nov. and Eubacterium sulci (Cato, Moore and Moore) comb. nov. Int J Syst Bacteriol 1999, 49(4):1375-1379.
14. Cato Elizabeth P., Moore L.V.H., Moore W.E.C. Fusobacterium alocis sp. nov. and Fusobacterium sulci sp. nov. from the human gingival sulcus 1985, 35:475-477.
15. Aruni A.W., Roy F., Fletcher H.M. Filifactor alocis has virulence attributes that can enhance its persistence under oxidative stress conditions and mediate invasion of epithelial cells by Porphyromonas gingivalis. Infect Immun 2011, 79:3872-3886.
16. Uematsu H., Sato N., Hossain M.Z., Ikeda T., Hoshino E. Degradation of arginine and other amino acids by butyrate-producing asaccharolytic anaerobic Gram-positive rods in periodontal pockets. Arch Oral Biol 2003, 48:423-429.
17. Aruni A.W., Zhang K., Dou Y., Fletcher H. Proteome analysis of coinfection of epithelial cells with Filifactor alocis and Porphyromonas gingivalis shows modulation of pathogen and host regulatory pathways. Infect Immun 2014, 82:3261-3274.
18. Fine D.H., Markowitz K., Fairlie K., Tischio-Bereski D., Ferrendiz J., Furgang D., et al. A consortium of Aggregatibacter actinomycetemcomitans (Aa), Streptococcus parasanguinis and Filifactor alocis are present in sites prior to bone loss in a longitudinal study of localized aggressive periodontitis. J Clin Microbiol 2013, 51(9):2850-2861.
19. Moffatt C.E., Whitmore S.E., Griffen A.L., Leys E.J., Lamont R.J. Filifactor alocis interactions with gingivalis epithelial cells. Mol Oral Microbiol 2011, 26:365-373.
20. Aruni A.W., Roy F., Sandberg L., Fletcher H.M. Proteome variation among Filifactor alocis strains. Proteomics 2012, 12:3343-3364.
21. Pei J., Grishin N.V. Type II CAAX prenyl endopeptidases belong to a novel superfamily of putative membrane-bound metalloproteases. Trends Biochem Sci 2001, 26:275-277.
22. Kumagai Y., Yagishita H., Yajima A., Okamoto T., Konishi K. Molecular mechanism for connective tissue destruction by dipeptidyl aminopeptidase IV produced by the periodontal pathogen Porphyromonas gingivalis. Infect Immun 2005, 73:2655-2664.
23. Price C.T., Abu K.Y. Exploitation of poly ubiquitination machinery through molecular mimicry by eukaryotic-like bacterial F-box effectors. Front Microbiol 2010, 1:1-12.
24. Saito A., Inagaki S., Ishihara K. Differential ability of periodontopathic bacteria to modulate invasion of human gingival epithelial cells by Porphyromonas gingivalis. Microb Pathog 2009, 47:329-333.
25. Edwards A.M., Grossman T.J., Rudney J.D. Fusobacterium nucleatum transports non invasive Streptococcus cristatus into human epithelial cells. Infect Immun 2006, 74:654-662.
26. Pan Y., Teng D., Burke A.C., Haase E.M., Scannapieco F.A. Oral bacteria modulate invasion and induction of apoptosis in HEp-2 cells by Pseudomonas aeruginosa. Microb Pathog 2009, 46:73-79.
27. Nitsche-Schmitz D.P., Rohde M., Chhatwal G.S. Invasion mechanisms of Gram-positive pathogenic cocci. Thromb Haemost 2007, 98:488-496.
28. Bedi G.S., Williams T. Purification and characterization of a collagen-degrading protease from Porphyromonas gingivalis. J Biol Chem 1994, 269:599-606.
29. Lawson D.A., Meyer T.F. Biochemical characterization of Porphyromonas (Bacteroides) gingivalis collagenase. Infect Immun 1992, 60:1524-1529.
30. Sojar H.T., Lee J.Y., Bedi G.S., Genco R.J. Purification and characterization of a protease from Porphyromonas gingivalis capable of degrading salt-solubilized collagen. Infect Immun 1993, 61:2369-2376.
31. Eley B.M., Cox S.W. Cathepsin B/L-, elastase-, tryptase-, trypsin- and dipeptidyl peptidase IV-like activities in gingival crevicular fluid: a comparison of levels before and after periodontal surgery in chronic periodontitis patients. J Periodontol 1992, 63:412-417.
32. Kapatral V., Anderson I., Ivanova N., Reznik G., Los T., Lykidis A., et al. Genome sequence and analysis of the oral bacterium Fusobacterium nucleatum strain ATCC 25586. J Bacteriol 2002, 184:2005-2018.
33. Berges D.A., DeWolf W.E., Dunn G.L., Newman D.J., Schmidt S.J., Taggart J.J., et al. Studies on the active site of succinyl-CoA:tetrahydrodipicolinate N-succinyltransferase. Characterization using analogs of tetrahydrodipicolinate. J Biol Chem 1986, 261:6160-6167.
34. Schlafer S., Riep B., Griffen A.L., Petrich A., Hubner J., Berning M., et al. Filifactor alocis - involvement in periodontal biofilms. BMC Microbiol 2010, 10:66.
35. Wang Q., Wright C.J., Dingming H., Uriarte S.M., Lamont R.J. Oral community interactions of Filifactor alocis invitro. PLoS One 2013, 8:e76271.
36. Xie H., Lin X., Wang B.Y., Wu J., Lamont R.J. Identification of a signalling molecule involved in bacterial intergeneric communication. Microbiology 2007, 153:3228-3234.
37. Louwen R., Staals R.H., Endtz H.P., van B.P., van der Oost J. The role of CRISPR-Cas systems in virulence of pathogenic bacteria. Microbiol Mol Biol Rev 2014, 78:74-78.
38. Chylinski K., Makarova K.S., Charpentier E., Koonin E.V. Classification and evolution of type II CRISPR-Cas systems. Nucleic Acids Res 2014, 42:6091-6105.
39. Kunin V., Sorek R., Hugenholtz P. Evolutionary conservation of sequence and secondary structures in CRISPR repeats. Genome Biol 2007, 8:R61.
40. Bhaya D., Davison M., Barrangou R. CRISPR-Cas systems in bacteria and archaea: versatile small RNAs for adaptive defense and regulation. Annu Rev Genet 2011, 45:273-297.
41. Sampson T.R., Saroj S.D., Llewellyn A.C., Tzeng Y.L., Weiss D.S. A CRISPR/Cas system mediates bacterial innate immune evasion and virulence. Nature 2013, 497:254-257.
42. Chylinski K., Le R.A., Charpentier E. The tracrRNA and Cas9 families of type II CRISPR-Cas immunity systems. RNA Biol 2013, 10:726-737.
43. Wang Q., Jotwani R., Le J., Krauss J.L., Potempa J., Coventry S.C., et al. Filifactor alocis infection and inflammatory responses in the mouse subcutaneous chamber model. Infect Immun 2014, 82:1205-1212.
44. Griswold A., Chen Y.Y., Snyder J.A., Burne R.A. Characterization of the arginine deiminase operon of Streptococcus rattus FA-1. Appl Environ Microbiol 2004, 70:1321-1327.
45. Foulquier C., Sebbag M., Clavel C., Chapuy-Regaud S., Al B.R., Mechin M.C., et al. Peptidyl arginine deiminase type 2 (PAD-2) and PAD-4 but not PAD-1, PAD-3, and PAD-6 are expressed in rheumatoid arthritis synovium in close association with tissue inflammation. Arthritis Rheum 2007, 56:3541-3553.
46. Maresz K.J., Hellvard A., Sroka A., Adamowicz K., Bielecka E., Koziel J., et al. Porphyromonas gingivalis facilitates the development and progression of destructive arthritis through its unique bacterial peptidylarginine deiminase (PAD). PLoS Pathog 2013, 9:1-10.
47. Touz M.C., Ropolo A.S., Rivero M.R., Vranych C.V., Conrad J.T., Svard S.G., et al. Arginine deiminase has multiple regulatory roles in the biology of Giardia lamblia. J Cell Sci 2008, 121:2930-2938.
48. Basic A., Dahlen G. Hydrogen sulfide production from subgingival plaque samples. Anaerobe 2014, http://dx.doi.org/10.1016/j.anaerobe.2014.09.017.
49. Li H., Guan R., Sun J., Hou B. A Bacteria community study of combined periodontal-endodontic lesions using denaturing gradient gel electrophoresis and sequencing analysis. J Periodontol 2014, 85(10):1442-1449.
50. Belstrom D., Fiehn N.E., Nielsen C.H., Kirkby N., Twetman S., Klepac-Ceraj V., et al. Differences in bacterial saliva profile between periodontitis patients and a control cohort. J Clin Periodontol 2014, 41:104-112.
51. Gomes G.B., Sarkis-Onofre R., Bonow M.L., Etges A., Jacinto R.C. An investigation of the presence of specific anaerobic species in necrotic primary teeth. Braz Oral Res 2013, 27:149-155.
52. Shaddox L.M., Huang H., Lin T., Hou W., Harrison P.L., Aukhil I. Microbiological characterization in children with aggressive periodontitis. J Dent Res 2012, 91:927-933.
53. Zhang C., Hou B.X., Zhao H.Y., Sun Z. Microbial diversity in failed endodontic root-filled teeth. Chin Med J (Engl) 2012, 125:1163-1168.
54. Montagner F., Jacinto R.C., Signoretti F.G., Sanches P.F., Gomes B.P. Clustering behavior in microbial communities from acute endodontic infections. J Endod 2012, 38:158-162.
55. Siqueira J.F., Rocas I.N. Detection of Filifactor alocis in endodontic infections associated with different forms of periradicular diseases. Oral Microbiol Immunol 2003, 18:263-265.
56. Siqueira J.F., Rocas I.N. Polymerase chain reaction-based analysis of microorganisms associated with failed endodontic treatment. Oral Surg Oral Med Oral Pathol Oral Radiol Endod 2004, 97:85-94.
57. Siqueira J.F., Rocas I.N., Alves F.R., Silva M.G. Bacteria in the apical root canal of teeth with primary apical periodontitis. Oral Surg Oral Med Oral Pathol Oral Radiol Endod 2009, 107:721-726.
58. Colombo A.P., Bennet S., Cotton S.L., Goodson J.M., Kent R., Haffajee A.D., et al. Impact of periodontal therapy on the subgingival microbiota of severe periodontitis: comparison between good responders and individuals with refractory periodontitis using the human oral microbe identification microarray. J Periodontol 2012, 83:1279-1287.
59. Kumar P.S., Griffen A.L., Barton J.A., Paster B.J., Moeschberger M.L., Leys E.J. New bacterial species associated with chronic periodontitis. J Dent Res 2003, 82:338-344.
60. Da Silva E.S., Feres M., Figueiredo L.C., Shibli J.A., Ramiro F.S., Faveri M. Microbiological diversity of peri-implantitis biofilm by Sanger sequencing. Clin Oral Implants Res 2014, 25:1192-1199.
61. Citron D.M. Update on the taxonomy and clinical aspects of the genus Fusobacterium. Clin Infect Dis 2002, 35:S22-S27.
62. Downes J., Munson M.A., Spratt D.A., Kononen E., Tarkka E., Jousimies-Somer H., et al. Characterisation of Eubacterium-like strains isolated from oral infections. J Med Microbiol 2001, 50:947-951.