-
1
-
-
33750383209
-
K-SVD: An algorithm for designing overcomplete dictionaries for sparse representation
-
Aharon,M. et al. (2006) K-SVD: an algorithm for designing overcomplete dictionaries for sparse representation. IEEE Trans. Signal Process., 54, 4311-4322.
-
(2006)
IEEE Trans. Signal Process.
, vol.54
, pp. 4311-4322
-
-
Aharon, M.1
-
2
-
-
77950245872
-
Improved automatic detection and segmentation of cell nuclei in histopathology images
-
Al-Kofahi,Y. et al. (2010) Improved automatic detection and segmentation of cell nuclei in histopathology images. IEEE Trans. Biomed. Eng., 57, 841-852.
-
(2010)
IEEE Trans. Biomed. Eng.
, vol.57
, pp. 841-852
-
-
Al-Kofahi, Y.1
-
3
-
-
37849043878
-
Improved detection of branching points in algorithms for automated neuron tracing from 3D confocal images
-
Al-Kofahi,Y. et al. (2008) Improved detection of branching points in algorithms for automated neuron tracing from 3D confocal images. Cytom. Part A, 73, 36-43.
-
(2008)
Cytom. Part A
, vol.73
, pp. 36-43
-
-
Al-Kofahi, Y.1
-
5
-
-
41049096731
-
Associative image analysis: A method for automated quantification of 3D multi-parameter images of brain tissue
-
Bjornsson,C.S. et al. (2008) Associative image analysis: A method for automated quantification of 3D multi-parameter images of brain tissue. J. Neurosci. Methods, 170, 165-178.
-
(2008)
J. Neurosci. Methods
, vol.170
, pp. 165-178
-
-
Bjornsson, C.S.1
-
6
-
-
84901261356
-
Hierarchical discriminative framework for detecting tubular structures in 3D images
-
Breitenreicher,D. et al. (2013) Hierarchical discriminative framework for detecting tubular structures in 3D images. Inf. Process. Med. Imaging, 23, 328-339.
-
(2013)
Inf. Process. Med. Imaging
, vol.23
, pp. 328-339
-
-
Breitenreicher, D.1
-
7
-
-
0032131292
-
Atomic decomposition by basis pursuit
-
Chen,S.S. et al. (1998) Atomic decomposition by basis pursuit. SIAM J. Sci. Comput., 20, 33-61.
-
(1998)
SIAM J. Sci. Comput.
, vol.20
, pp. 33-61
-
-
Chen, S.S.1
-
8
-
-
79958088818
-
Automated tracing of neurites from light microscopy stacks of images
-
Chothani,P. et al. (2011) Automated tracing of neurites from light microscopy stacks of images. Neuroinformatics, 9, 263-278.
-
(2011)
Neuroinformatics
, vol.9
, pp. 263-278
-
-
Chothani, P.1
-
10
-
-
84892934710
-
Glia and epilepsy: Experimental investigation of antiepileptic drugs in an astroglia/microglia co-culture model of inflammation
-
Dambach,H. et al. (2014) Glia and epilepsy: experimental investigation of antiepileptic drugs in an astroglia/microglia co-culture model of inflammation. Epilepsia, 55, 184-192.
-
(2014)
Epilepsia
, vol.55
, pp. 184-192
-
-
Dambach, H.1
-
11
-
-
84883704389
-
Neuroscience: Map the other brain
-
Fields,R.D. (2013) Neuroscience: map the other brain. Nature, 501, 25-27.
-
(2013)
Nature
, vol.501
, pp. 25-27
-
-
Fields, R.D.1
-
13
-
-
0029076362
-
Microglia: Intrinsic immuneffector cell of the brain
-
Gehrmann,J. et al. (1995) Microglia: intrinsic immuneffector cell of the brain. Brain Res. Rev., 20, 269-287.
-
(1995)
Brain Res. Rev.
, vol.20
, pp. 269-287
-
-
Gehrmann, J.1
-
14
-
-
79958146216
-
The DIADEM metric: Comparing multiple reconstructions of the same neuron
-
Gillette,T.A. et al. (2011) The DIADEM metric: comparing multiple reconstructions of the same neuron. Neuroinformatics, 9, 233-245.
-
(2011)
Neuroinformatics
, vol.9
, pp. 233-245
-
-
Gillette, T.A.1
-
16
-
-
0031102203
-
Sparse signal reconstruction from limited data using FOCUSS: A re-weighted minimum norm algorithm
-
Gorodnitsky,I.F. and Rao,B.D. (1997) Sparse signal reconstruction from limited data using FOCUSS: A re-weighted minimum norm algorithm. IEEE Trans. Signal Process., 45, 600-616.
-
(1997)
IEEE Trans. Signal Process.
, vol.45
, pp. 600-616
-
-
Gorodnitsky, I.F.1
Rao, B.D.2
-
17
-
-
0042739762
-
Automated three-dimensional tracing of neurons in confocal and brightfield images
-
He,W. et al. (2003) Automated three-dimensional tracing of neurons in confocal and brightfield images. Microsc.Microanal., 9, 296-310.
-
(2003)
Microsc.Microanal.
, vol.9
, pp. 296-310
-
-
He, W.1
-
19
-
-
84929956985
-
Improved automatic centerline tracing for dendritic and axonal structures
-
Jiménez,D. et al. (2014) Improved automatic centerline tracing for dendritic and axonal structures. Neuroinformatics, 13, 1-18.
-
(2014)
Neuroinformatics
, vol.13
, pp. 1-18
-
-
Jiménez, D.1
-
20
-
-
84892673642
-
Human alcohol-related neuropathology
-
De la Monte,S.M. and Kril,J.J. (2014) Human alcohol-related neuropathology. Acta Neuropathol., 127, 71-90.
-
(2014)
Acta Neuropathol.
, vol.127
, pp. 71-90
-
-
De La Monte, S.M.1
Kril, J.J.2
-
21
-
-
84928422404
-
Quantitative arbor analytics: Unsupervised harmonic coclustering of populations of brain cell arbors based on L-measure
-
Lu,Y. et al. (2014) Quantitative arbor analytics: unsupervised harmonic coclustering of populations of brain cell arbors based on L-measure. Neuroinformatics, 13, 47-63.
-
(2014)
Neuroinformatics
, vol.13
, pp. 47-63
-
-
Lu, Y.1
-
22
-
-
79958158724
-
The FARSIGHT trace editor: An open source tool for 3-D inspection and efficient pattern analysis aided editing of automated neuronal reconstructions
-
Luisi,J. et al. (2011) The FARSIGHT trace editor: an open source tool for 3-D inspection and efficient pattern analysis aided editing of automated neuronal reconstructions. Neuroinformatics, 9, 305-315.
-
(2011)
Neuroinformatics
, vol.9
, pp. 305-315
-
-
Luisi, J.1
-
23
-
-
0027842081
-
Matching pursuits with time-frequency dictionaries
-
Mallat,S.G. (1993) Matching pursuits with time-frequency dictionaries. IEEE Trans. Signal Process., 41, 3397-3415.
-
(1993)
IEEE Trans. Signal Process.
, vol.41
, pp. 3397-3415
-
-
Mallat, S.G.1
-
24
-
-
84883045032
-
Hardware and software implementations of Prim's algorithm for efficient minimum spanning tree computation
-
Mariano, A. et al. (2013) Hardware and software implementations of Prim's algorithm for efficient minimum spanning tree computation. In: Embedded Systems: Design, Analysis and Verification. Springer, Heidelberg, pp. 151-158.
-
(2013)
Embedded Systems: Design, Analysis and Verification. Springer, Heidelberg
, pp. 151-158
-
-
Mariano, A.1
-
25
-
-
77954289614
-
Neuron tracing in perspective
-
Meijering,E. (2010) Neuron tracing in perspective. Cytom. A, 77, 693-704.
-
(2010)
Cytom. A
, vol.77
, pp. 693-704
-
-
Meijering, E.1
-
27
-
-
84857555811
-
Neuromantic-from semi-manual to semi-automatic reconstruction of neuron morphology
-
Myatt,D.R. et al. (2012) Neuromantic-from semi-manual to semi-automatic reconstruction of neuron morphology. Front. Neuroinform., 6, 4.
-
(2012)
Front. Neuroinform.
, vol.6
, pp. 4
-
-
Myatt, D.R.1
-
28
-
-
79958130994
-
3-D image pre-processing algorithms for improved automated tracing of neuronal arbors
-
Narayanaswamy,A. et al. (2011) 3-D image pre-processing algorithms for improved automated tracing of neuronal arbors. Neuroinformatics, 9, 219-231.
-
(2011)
Neuroinformatics
, vol.9
, pp. 219-231
-
-
Narayanaswamy, A.1
-
29
-
-
0029291966
-
Sparse approximate solutions to linear systems
-
Natarajan,B.K. (1995) Sparse approximate solutions to linear systems. SIAM J. Comput., 24, 227-234.
-
(1995)
SIAM J. Comput.
, vol.24
, pp. 227-234
-
-
Natarajan, B.K.1
-
30
-
-
80053575339
-
Dynamic motility of microglia: Purinergic modulation of microglial movement in the normal and pathological brain
-
Ohsawa K. and Kohsaka S. (2011) Dynamic motility of microglia: purinergic modulation of microglial movement in the normal and pathological brain. Glia, 59, 1793-1799.
-
(2011)
Glia
, vol.59
, pp. 1793-1799
-
-
Ohsawa, K.1
Kohsaka, S.2
-
31
-
-
84897412103
-
An active learning approach for rapid characterization of endothelial cells in human tumors
-
Padmanabhan,R.K. et al. (2014) An active learning approach for rapid characterization of endothelial cells in human tumors. PLoS One, 9, e90495.
-
(2014)
PLoS One
, vol.9
, pp. e90495
-
-
Padmanabhan, R.K.1
-
32
-
-
0027814133
-
Orthogonal matching pursuit: Recursive function approximation with applications to wavelet decomposition
-
IEEE Comput. Soc. Press
-
Pati,Y.C. et al. (1993) Orthogonal matching pursuit: recursive function approximation with applications to wavelet decomposition. In: Proceedings of 27th Asilomar Conference on Signals, Systems and Computers. IEEE Comput. Soc. Press, pp. 40-44.
-
(1993)
Proceedings of 27th Asilomar Conference on Signals, Systems and Computers
, pp. 40-44
-
-
Pati, Y.C.1
-
33
-
-
77954196544
-
Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model
-
Peng,H. et al. (2010) Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model. Bioinformatics, 26, i38-i46.
-
(2010)
Bioinformatics
, vol.26
, pp. i38-i46
-
-
Peng, H.1
-
34
-
-
84904201456
-
Virtual finger boosts three-dimensional imaging and microsurgery as well as terabyte volume image visualization and analysis
-
Peng,H. et al. (2014) Virtual finger boosts three-dimensional imaging and microsurgery as well as terabyte volume image visualization and analysis. Nat. Commun., 5, 4342.
-
(2014)
Nat. Commun.
, vol.5
, pp. 4342
-
-
Peng, H.1
-
35
-
-
84899760246
-
Large-scale automated image analysis for computational profiling of brain tissue surrounding implanted neuroprosthetic devices using Python
-
Rey-Villamizar,N. et al. (2014) Large-scale automated image analysis for computational profiling of brain tissue surrounding implanted neuroprosthetic devices using Python. Front. Neuroinform., 8, 39.
-
(2014)
Front. Neuroinform.
, vol.8
, pp. 39
-
-
Rey-Villamizar, N.1
-
36
-
-
84885390077
-
Minimal path techniques for automatic extraction of microglia extensions
-
Rouchdy,Y. et al. (2011) Minimal path techniques for automatic extraction of microglia extensions. Int. J. Comput. Vis. Biomech., 4, 35-42.
-
(2011)
Int. J. Comput. Vis. Biomech.
, vol.4
, pp. 35-42
-
-
Rouchdy, Y.1
-
37
-
-
84885386942
-
Geodesic voting for the automatic extraction of tree structures. Methods and applications
-
Rouchdy,Y. and Cohen,L.D. (2013) Geodesic voting for the automatic extraction of tree structures. Methods and applications. Comput. Vis. Image Underst., 117, 1453-1467.
-
(2013)
Comput. Vis. Image Underst.
, vol.117
, pp. 1453-1467
-
-
Rouchdy, Y.1
Cohen, L.D.2
-
38
-
-
77952714665
-
Dictionaries for sparse representation modeling
-
Rubinstein,R. et al. (2010) Dictionaries for sparse representation modeling. Proc. IEEE, 98, 1045-1057.
-
(2010)
Proc. IEEE
, vol.98
, pp. 1045-1057
-
-
Rubinstein, R.1
-
39
-
-
7744235523
-
New methods for the computer-assisted 3-D reconstruction of neurons from confocal image stacks
-
Schmitt,S. et al. (2004) New methods for the computer-assisted 3-D reconstruction of neurons from confocal image stacks. Neuroimage, 23, 1283-1298.
-
(2004)
Neuroimage
, vol.23
, pp. 1283-1298
-
-
Schmitt, S.1
-
40
-
-
43149098519
-
L-Measure: A WEB-accessible tool for the analysis, comparison and search of digital reconstructions of neuronal morphologies
-
Scorcioni,R. et al. (2008) L-Measure: A WEB-accessible tool for the analysis, comparison and search of digital reconstructions of neuronal morphologies. Nat. Protoc., 3, 866-876.
-
(2008)
Nat. Protoc.
, vol.3
, pp. 866-876
-
-
Scorcioni, R.1
-
41
-
-
0029966538
-
A fast marching level set method for monotonically advancing fronts
-
Sethian,J.A. (1996) A fast marching level set method for monotonically advancing fronts. Proc. Natl. Acad. Sci. USA, 93, 1591-1595.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 1591-1595
-
-
Sethian, J.A.1
-
42
-
-
17844404517
-
Microglia and neuroprotection: Implications for Alzheimer's disease
-
Streit,W.J. (2005) Microglia and neuroprotection: implications for Alzheimer's disease. Brain Res. Rev., 48, 234-239.
-
(2005)
Brain Res. Rev.
, vol.48
, pp. 234-239
-
-
Streit, W.J.1
-
43
-
-
78650127889
-
HapStar: Automated haplotype network layout and visualization
-
Teacher,A.G.F. and Griffiths,D.J. (2011) HapStar: automated haplotype network layout and visualization. Mol. Ecol. Resour., 11, 151-153.
-
(2011)
Mol. Ecol. Resour.
, vol.11
, pp. 151-153
-
-
Teacher, A.G.F.1
Griffiths, D.J.2
-
44
-
-
79960413901
-
Robust, globally consistent and fully automatic multiimage registration and montage synthesis for 3-D multi-channel images
-
Tsai,C.-L. et al. (2011) Robust, globally consistent and fully automatic multiimage registration and montage synthesis for 3-D multi-channel images. J. Microsc., 243, 154-171.
-
(2011)
J. Microsc.
, vol.243
, pp. 154-171
-
-
Tsai, C.-L.1
-
45
-
-
79958172203
-
Automated reconstruction of dendritic and axonal trees by global optimization with geometric priors
-
Türetken,E. et al. (2011) Automated reconstruction of dendritic and axonal trees by global optimization with geometric priors. Neuroinformatics, 9, 279-302.
-
(2011)
Neuroinformatics
, vol.9
, pp. 279-302
-
-
Türetken, E.1
-
47
-
-
59249101942
-
Detection of the optimal neuron traces in confocal microscopy images
-
Vasilkoski,Z. and Stepanyants,A. (2009) Detection of the optimal neuron traces in confocal microscopy images. J. Neurosci. Methods, 178, 197-204.
-
(2009)
J. Neurosci. Methods
, vol.178
, pp. 197-204
-
-
Vasilkoski, Z.1
Stepanyants, A.2
-
48
-
-
80052914607
-
Novel 4-D open-curve active contour and curve completion approach for automated tree structure extraction
-
Wang,Y. et al. (2011) Novel 4-D open-curve active contour and curve completion approach for automated tree structure extraction. In: IEEE Conference on Computer Vision and Pattern Recognition (CVPR). IEEE, pp. 1105-1112.
-
(2011)
IEEE Conference on Computer Vision and Pattern Recognition (CVPR). IEEE
, pp. 1105-1112
-
-
Wang, Y.1
-
49
-
-
28844498390
-
New techniques for imaging, digitization and analysis of three-dimensional neural morphology on multiple scales
-
Wearne,S.L. et al. (2005) New techniques for imaging, digitization and analysis of three-dimensional neural morphology on multiple scales. Neuroscience, 136, 661-680.
-
(2005)
Neuroscience
, vol.136
, pp. 661-680
-
-
Wearne, S.L.1
-
50
-
-
84878276723
-
APP2: Automatic tracing of 3D neuron morphology based on hierarchical pruning of a gray-weighted image distance-tree
-
Xiao,H. and Peng,H. (2013) APP2: Automatic tracing of 3D neuron morphology based on hierarchical pruning of a gray-weighted image distance-tree. Bioinformatics, 29, 1448-1454.
-
(2013)
Bioinformatics
, vol.29
, pp. 1448-1454
-
-
Xiao, H.1
Peng, H.2
-
52
-
-
75149149751
-
MDL constrained 3-D grayscale skeletonization algorithm for automated extraction of dendrites and spines from fluorescence confocal images
-
Yuan,X. et al. (2009) MDL constrained 3-D grayscale skeletonization algorithm for automated extraction of dendrites and spines from fluorescence confocal images. Neuroinformatics, 7, 213-232.
-
(2009)
Neuroinformatics
, vol.7
, pp. 213-232
-
-
Yuan, X.1
|