메뉴 건너뛰기




Volumn 110, Issue 510, 2015, Pages 503-514

MAD Bayes for Tumor Heterogeneity—Feature Allocation With Exponential Family Sampling

Author keywords

Bayesian nonparametric; Bregman divergence; Feature allocation; Indian buffet process; Next generation sequencing; Tumor heterogeneity

Indexed keywords


EID: 84936771017     PISSN: 01621459     EISSN: 1537274X     Source Type: Journal    
DOI: 10.1080/01621459.2014.995794     Document Type: Article
Times cited : (26)

References (25)
  • 1
    • 84891370404 scopus 로고    scopus 로고
    • Expands: Expanding Ploidy and Allele Frequency on Nested Subpopulations
    • N.Andor,, J.V.Harness,, S.Müller,, H.W.Mewes,, C.Petritsch, (2014), Expands: Expanding Ploidy and Allele Frequency on Nested Subpopulations, Bioinformatics, 30, 50–60.
    • (2014) Bioinformatics , vol.30 , pp. 50-60
    • Andor, N.1    Harness, J.V.2    Müller, S.3    Mewes, H.W.4    Petritsch, C.5
  • 3
    • 49949144765 scopus 로고
    • The Relaxation Method of Finding the Common Point of Convex Sets and Its Application to the Solution of Problems in Convex Programming
    • L.M.Bregman, (1967), The Relaxation Method of Finding the Common Point of Convex Sets and Its Application to the Solution of Problems in Convex Programming, USSR Computational Mathematics and Mathematical Physics, 7, 200–217.
    • (1967) USSR Computational Mathematics and Mathematical Physics , vol.7 , pp. 200-217
    • Bregman, L.M.1
  • 4
    • 84865707036 scopus 로고    scopus 로고
    • Beta Processes, Stick-Breaking and Power Laws
    • T.Broderick,, M.I.Jordan,, J.Pitman, (2012a), Beta Processes, Stick-Breaking and Power Laws, Bayesian Analysis, 7, 439–476.
    • (2012) Bayesian Analysis , vol.7 , pp. 439-476
    • Broderick, T.1    Jordan, M.I.2    Pitman, J.3
  • 7
    • 84862776906 scopus 로고    scopus 로고
    • Clonal Evolution in Relapsed Acute Myeloid Leukaemia Revealed by Whole-Genome Sequencing
    • Ding, L., Ley, T. J., Larson, D. E., Miller, C. A., Koboldt, D. C., Welch, J. S., Ritchey, J. K., Young, M. A., Lamprecht, T., McLellan, M. D., McMichael, J. F., Wallis, J. W., Lu, C., Shen, D., Harris, C. C., Dooling, D. J., Fulton, R. S., Fulton, L. L., Chen, K., Schmidt, H., Kalicki-Veizer, J., Magrini, V. J., Cook, L., McGrath, S. D., Vickery, T. L., Wendl, M. C., Heath, S., Watson, M. A., Link, D. C., Tomasson, M. H., Shannon, W. D., Payton, J. E., Kulkarni, S., Westervelt, P., Walter, M. J., Graubert, T. A., Mardis, E. R., Wilson, R. K., and DiPersio, J. F. (2012), Clonal Evolution in Relapsed Acute Myeloid Leukaemia Revealed by Whole-Genome Sequencing, Nature, 481, 506–510.
    • (2012) Nature , vol.481 , pp. 506-510
  • 8
    • 84863393080 scopus 로고    scopus 로고
    • Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing
    • Gerlinger, M., Rowan, A. J., Horswell, S., Larkin, J., Endesfelder, D., Gronroos, E., Martinez, P., Matthews, N., Stewart, A., Tarpey, P., Varela, I., Phillimore, B., Begum, S., McDonald, N. Q., Butler, A., Jones, D., Raine, K., Latimer, C., Santos, C. R., Nohadani, M., Eklund, A. C., Spencer-Dene, B., Clark, G., Pickering, L., Stamp, G., Gore, M., Szallasi, Z., Downward, J., Futreal, P. A., and Swanton, C. (2012), Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing, New England Journal of Medicine, 366, 883–892.
    • (2012) New England Journal of Medicine , vol.366 , pp. 883-892
  • 9
    • 77956507425 scopus 로고    scopus 로고
    • The Dirichlet Process, Related Priors and Posterior Asymptotics
    • Cambridge, UK: Cambridge University Press:
    • S.Ghoshal, (2010), “The Dirichlet Process, Related Priors and Posterior Asymptotics,” in Bayesian Nonparametrics, eds. N.L.Hjort, C.Holmes, P.M.A.S.G.WalkerP. M., and S. G., Cambridge, UK: Cambridge University Press, pp. 22–34.
    • (2010) Bayesian Nonparametrics , pp. 22-34
    • Ghoshal, S.1    Hjort, N.L.2    Holmes, C.3    Walker, P.M.A.S.G.4
  • 10
    • 77956889087 scopus 로고
    • Reversible Jump Markov Chain Monte Carlo Computation and Bayesian Model Determination
    • P.J.Green, (1995), Reversible Jump Markov Chain Monte Carlo Computation and Bayesian Model Determination, Biometrika, 82, 711–732.
    • (1995) Biometrika , vol.82 , pp. 711-732
    • Green, P.J.1
  • 14
    • 75549090213 scopus 로고    scopus 로고
    • Kegg for Representation and Analysis of Molecular Networks Involving Diseases and Drugs
    • M.Kanehisa,, S.Goto,, M.Furumichi,, M.Tanabe,, M.Hirakawa, (2010), Kegg for Representation and Analysis of Molecular Networks Involving Diseases and Drugs, Nucleic Acids Research, 38, D355–D360.
    • (2010) Nucleic Acids Research , vol.38 , pp. 355-360
    • Kanehisa, M.1    Goto, S.2    Furumichi, M.3    Tanabe, M.4    Hirakawa, M.5
  • 19
    • 84880560760 scopus 로고    scopus 로고
    • Purbayes: Estimating Tumor Cellularity and Subclonality in Next-Generation Sequencing Data
    • N.B.Larson,, B.L.Fridley, (2013), Purbayes: Estimating Tumor Cellularity and Subclonality in Next-Generation Sequencing Data, Bioinformatics, 29, 1888–1889.
    • (2013) Bioinformatics , vol.29 , pp. 1888-1889
    • Larson, N.B.1    Fridley, B.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.