-
1
-
-
70349556543
-
Personalized copy number and segmental duplication maps using next-generation sequencing
-
Alkan,C. et al. (2009) Personalized copy number and segmental duplication maps using next-generation sequencing. Nat. Genet., 41, 1061-1067.
-
(2009)
Nat. Genet.
, vol.41
, pp. 1061-1067
-
-
Alkan, C.1
-
2
-
-
84859535421
-
Copy number variation of individual cattle genomes using next-generation sequencing
-
Bickhart,D.M. et al. (2012) Copy number variation of individual cattle genomes using next-generation sequencing. Genome Res., 22, 778-790.
-
(2012)
Genome Res.
, vol.22
, pp. 778-790
-
-
Bickhart, D.M.1
-
3
-
-
79955483667
-
A framework for variation discovery and genotyping using next-generation DNA sequencing data
-
DePristo,M.A. et al. (2011) A framework for variation discovery and genotyping using next-generation DNA sequencing data. Nat. Genet., 43, 491-498.
-
(2011)
Nat. Genet.
, vol.43
, pp. 491-498
-
-
Depristo, M.A.1
-
4
-
-
84863043816
-
Serial translocation by means of circular intermediates underlies colour sidedness in cattle
-
Durkin,K. et al. (2012) Serial translocation by means of circular intermediates underlies colour sidedness in cattle. Nature, 482, 81-84.
-
(2012)
Nature
, vol.482
, pp. 81-84
-
-
Durkin, K.1
-
5
-
-
77955163329
-
MrsFAST: A cache-oblivious algorithm for short-read mapping
-
Hach,F. et al. (2010) mrsFAST: A cache-oblivious algorithm for short-read mapping. Nat. Methods, 7, 576-577.
-
(2010)
Nat. Methods
, vol.7
, pp. 576-577
-
-
Hach, F.1
-
6
-
-
67650064593
-
Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes
-
Hormozdiari,F. et al. (2009) Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes. Genome Res., 19, 1270-1278.
-
(2009)
Genome Res.
, vol.19
, pp. 1270-1278
-
-
Hormozdiari, F.1
-
7
-
-
84856409929
-
Detection of structural variants and indels within exome data
-
Karakoc,E. et al. (2012) Detection of structural variants and indels within exome data. Nat. Methods, 9, 176-178.
-
(2012)
Nat. Methods
, vol.9
, pp. 176-178
-
-
Karakoc, E.1
-
8
-
-
62549131646
-
PEMer: A computational framework with simulationbased error models for inferring genomic structural variants from massive paired-end sequencing data
-
Korbel,J. et al. (2009) PEMer: A computational framework with simulationbased error models for inferring genomic structural variants from massive paired-end sequencing data. Genome Biol., 10, R23.
-
(2009)
Genome Biol.
, vol.10
, pp. R23
-
-
Korbel, J.1
-
9
-
-
84912096454
-
LUMPY: A probabilistic framework for structural variant discovery
-
Layer,R.M. et al. (2014) LUMPY: A probabilistic framework for structural variant discovery. Genome Biol., 15, R84.
-
(2014)
Genome Biol.
, vol.15
, pp. R84
-
-
Layer, R.M.1
-
10
-
-
77951798133
-
Analysis of copy number variations among diverse cattle breeds
-
Liu,G.E. et al. (2010) Analysis of copy number variations among diverse cattle breeds. Genome Res., 20, 693-703.
-
(2010)
Genome Res.
, vol.20
, pp. 693-703
-
-
Liu, G.E.1
-
11
-
-
84975804424
-
Mapping copy number variation by population-scale genome sequencing
-
Mills,R.E. et al. (2011) Mapping copy number variation by population-scale genome sequencing. Nature, 470, 59-65.
-
(2011)
Nature
, vol.470
, pp. 59-65
-
-
Mills, R.E.1
-
12
-
-
77951770756
-
BEDTools: A flexible suite of utilities for comparing genomic features
-
Quinlan,A.R. and Hall,I.M. (2010) BEDTools: A flexible suite of utilities for comparing genomic features. Bioinforma. Oxf. Engl., 26, 841-842.
-
(2010)
Bioinforma. Oxf. Engl.
, vol.26
, pp. 841-842
-
-
Quinlan, A.R.1
Hall, I.M.2
-
13
-
-
84866440781
-
DELLY: Structural variant discovery by integrated paired-end and split-read analysis
-
Rausch,T. et al. (2012) DELLY: structural variant discovery by integrated paired-end and split-read analysis. Bioinformatics, 28, i333-i339.
-
(2012)
Bioinformatics
, vol.28
, pp. i333-i339
-
-
Rausch, T.1
-
15
-
-
67651219230
-
Copy number variation in intron 1 of SOX5 causes the pea-comb phenotype in chickens
-
Wright,D. et al. (2009) Copy number variation in intron 1 of SOX5 causes the pea-comb phenotype in chickens. PLoS Genet., 5, e1000512.
-
(2009)
PLoS Genet.
, vol.5
, pp. e1000512
-
-
Wright, D.1
-
16
-
-
70350694443
-
PINDEL: A pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads
-
Ye,K. et al. (2009) PINDEL: A pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads. Bioinformatics, 25, 2865-2871.
-
(2009)
Bioinformatics
, vol.25
, pp. 2865-2871
-
-
Ye, K.1
-
17
-
-
84902302515
-
Detection of copy number variations and their effects in Chinese bulls
-
Zhang,L. et al. (2014) Detection of copy number variations and their effects in Chinese bulls. BMC Genomics, 15, 480.
-
(2014)
BMC Genomics
, vol.15
, pp. 480
-
-
Zhang, L.1
-
18
-
-
65149096757
-
A whole-genome assembly of the domestic cow, Bos taurus
-
Zimin,A.V. et al. (2009) A whole-genome assembly of the domestic cow, Bos taurus. Genome Biol., 10, R42.
-
(2009)
Genome Biol.
, vol.10
, pp. R42
-
-
Zimin, A.V.1
|