Whole-genome analysis of plasmodium spp. Utilizing a new agilent technologies DNA microarray platform

Methods in Molecular Biology

Volumn 923, Issue , 2013, Pages 213-219

  Painter, Heather J ^a   Altenhofen, Lindsey M ^a   Kafsack, Björn F C ^a   Llinás, Manuel ^a  

^a NONE

Author keywords

Agilent Technologies; Comparative genomic hybridization; DNA microarray; Gene expression; Microarray hybridization; Plasmodium genomics; Transcription profiling

Indexed keywords

COMPLEMENTARY DNA; MOLECULAR MARKER;

ARTICLE; COMPARATIVE GENOMIC HYBRIDIZATION; COST EFFECTIVENESS ANALYSIS; DEVELOPMENTAL STAGE; DNA MICROARRAY; GENE EXPRESSION; GENE SEQUENCE; GENETIC MANIPULATION; GENOME ANALYSIS; MALARIA; NONHUMAN; OLIGONUCLEOTIDE PROBE; PARASITE IDENTIFICATION; PLASMODIUM BERGHEI; PLASMODIUM FALCIPARUM; PRIORITY JOURNAL;

EID: 84934444623     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-26-7_14     Document Type: Article

References (5)

1. Kafsack BFC et al (2012) New Agilent platform DNA microarrays for transcriptome analysis of Plasmodium falciparum and Plasmodium berghei for the malaria research community. Malar J 11:187
2. Hughes TR et al (2001) Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer. Nat Biotechnol 19:342-347
3. Shi L et al (2006) The MicroArray Quality Control (MAQC) project shows inter-and intra-platform reproducibility of gene expression measurements. Nat Biotechnol 24: 1151-1161
4. Hardiman G (2004) Microarray platforms-comparisons and contrasts. Pharmacogenomics 5:487-502
5. Hu G et al (2007) Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy. BMC Bioinformatics 8:350