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Volumn 1091, Issue , 2014, Pages 343-352

High-quality macromolecular graphics on mobile devices: A quick starter's guide

Author keywords

Android; iMolview; iOS; iPad; iPhone; Macromolecular graphics; Mobile devices; Protein data bank; Protein structure; PyMOL; RCSB PDB; Tablets

Indexed keywords

ARTICLE; COMPUTER GRAPHICS; COMPUTER PROGRAM; DEVICES; MACROMOLECULE; MOBILE APPLICATION; MOBILE PHONE; PRIORITY JOURNAL; PROTEIN DATA BANK; PROTEIN STRUCTURE; AMINO TERMINAL SEQUENCE; CARBOXY TERMINAL SEQUENCE; COMPARATIVE STUDY; COMPUTER; CRYSTAL STRUCTURE; IMAGE QUALITY; INTERNET; PROTEIN SECONDARY STRUCTURE; TABLET COMPUTER;

EID: 84934443484     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-691-7_24     Document Type: Article
Times cited : (8)

References (20)
  • 1
    • 84891795384 scopus 로고    scopus 로고
    • CueMol viewer app (iOS) is only a viewer for scenes created on the desktop versions of CueMol and does not offer standalone graphics capability
    • CueMol viewer app (iOS) is only a viewer for scenes created on the desktop versions of CueMol and does not offer standalone graphics capability.
  • 2
    • 84891824299 scopus 로고    scopus 로고
    • Several apps are mainly designed for small molecules and lack the full graphical representation styles for protein structures-these include Molecules (iOS) and Atomdriod (Android). ESmol is the little brother of NDKmol but for supporting old devices
    • Several apps are mainly designed for small molecules and lack the full graphical representation styles for protein structures-these include Molecules (iOS) and Atomdriod (Android). ESmol is the little brother of NDKmol but for supporting old devices.
  • 3
    • 84891799307 scopus 로고    scopus 로고
    • PDB ID is a unique 4-alphanumeric character combination that is assigned to each deposited structure in the Protein Data Bank
    • PDB ID is a unique 4-alphanumeric character combination that is assigned to each deposited structure in the Protein Data Bank (www.rcsb.org).
  • 4
    • 84891810820 scopus 로고    scopus 로고
    • This ID is usually found in the manuscript that describes that particular structure
    • This ID is usually found in the manuscript that describes that particular structure.
  • 5
    • 84891821610 scopus 로고    scopus 로고
    • Richardson cartoon style is a representation of the overall backbone structure of the protein, with secondary structural elements helices shown as coiled ribbons, strands shown as fl at arrows, and coils/loops shown as thin tubes
    • Richardson cartoon style is a representation of the overall backbone structure of the protein, with secondary structural elements helices shown as coiled ribbons, strands shown as fl at arrows, and coils/loops shown as thin tubes.
  • 6
    • 84891806108 scopus 로고    scopus 로고
    • The complete user manual of iMolview is accessed by Menu, then "Help" inside the app
    • The complete "user manual" of iMolview is accessed by Menu, then "Help" inside the app.
  • 7
    • 84891768139 scopus 로고    scopus 로고
    • The users can transfer PDB fi les or images between mobile devices using Bluetooth-based Apps such as iShareFiles (free), without Internet or Bump free with Wi-Fi or 3G
    • The users can transfer PDB fi les or images between mobile devices using Bluetooth-based Apps such as iShareFiles (free), without Internet or Bump (http://bu.mp; free) with Wi-Fi or 3G.
  • 8
    • 84891772149 scopus 로고    scopus 로고
    • Bump is cross-platform and can be used for transferring fi les between iPhones/iPads, Android devices, and computers
    • Bump is cross-platform and can be used for transferring fi les between iPhones/iPads, Android devices, and computers.
  • 9
    • 84891823526 scopus 로고    scopus 로고
    • Obviously, the fi les can also be sent via e-mail
    • Obviously, the fi les can also be sent via e-mail.
  • 10
    • 0004243814 scopus 로고    scopus 로고
    • Web sites: iMolview
    • Developers' Web sites: iMolview: www.molsoft.com/iMolview.html
    • Developers
  • 11
    • 84891779587 scopus 로고    scopus 로고
    • PyMOL app: pymol.org/mobile RCSB PDB Mobile
    • PyMOL app: pymol.org/mobile RCSB PDB Mobile: www.rcsb.org/pdb/static.do?p = mobile/RCSBapp.html
  • 13
    • 84891823923 scopus 로고    scopus 로고
    • CueMol
    • CueMol: www.cuemol.org/en
  • 14
    • 84891779989 scopus 로고    scopus 로고
    • Molecules
    • Molecules: www.sunsetlakesoftware.com/molecules
  • 15
    • 84891751747 scopus 로고    scopus 로고
    • iPharosDreams
    • iPharosDreams: www.pharosdreams.com/mobile3d
  • 16
    • 84891759137 scopus 로고    scopus 로고
    • Fin Mol: www.dubesoft.com
    • Fin Mol
  • 17
    • 84891750024 scopus 로고    scopus 로고
    • CMol: cmol.org.uk
    • CMol: cmol.org.uk
  • 18
    • 84891789879 scopus 로고    scopus 로고
    • NDKmol/ESmol: webglmol.sourceforge.jp/android-en.html
    • NDKmol/ESmol: webglmol.sourceforge.jp/android-en.html
  • 19
    • 84891777477 scopus 로고    scopus 로고
    • Jmol MV jmol.sourceforge.net Atomdroid
    • Jmol MV: jmol.sourceforge.net Atomdroid: www.uni-goettingen.de/en/123989. html
  • 20
    • 84891776290 scopus 로고    scopus 로고
    • This article was written in the fi rst quarter of 2013 but all information has been checked and updated at proofs stage (October, 2013)
    • This article was written in the fi rst quarter of 2013 but all information has been checked and updated at proofs stage (October, 2013).


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.