Simultaneous identification and quantification of nitrosylation sites by combination of biotin switch and ICAT Labeling

Methods in Molecular Biology

Volumn 1072, Issue , 2014, Pages 609-620

  Fares, Abasse ^a   Nespoulous, Claude ^a   Rossignol, Michel ^a   Peltier, Jean Benoît ^a  

^a MONTPELLIER SUPAGRO   (France)

Author keywords

Biotin switch; Isotope coded affinity tag; Nitrosothiols; Protein S nitrosylation; Quantitation

Indexed keywords

AVIDIN; BIOTIN; BUFFER; CYSTEINE; NITRIC OXIDE DONOR;

ARABIDOPSIS; ARTICLE; CHEMICAL LABELING; CONTROLLED STUDY; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; NITROSYLATION; NONHUMAN; POPULATION ABUNDANCE; PRIORITY JOURNAL; PROTEIN ANALYSIS;

ARABIDOPSIS;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; BIOTIN; ISOTOPE LABELING; MASS SPECTROMETRY; NITROSATION; S-NITROSOTHIOLS; STATISTICS AS TOPIC;

EID: 84934442218     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-631-3_41     Document Type: Article

References (11)

1. Astier J, Rasul S, Koen E et al (2011) S-nitrosylation: an emerging post-translational protein modifi cation in plants. Plant Sci 181: 527-533
2. Jaffrey SR, Erdjument-Bromage H, Ferris CD et al (2001) S-nitrosylation: a physiological signal for neuronal nitric oxide. Nat Cell Biol 3: 193-197
3. Wu C, Parrott AM, Liu T et al (2011) Distinction of thioredoxin transnitrosylation and denitrosylation target proteins by the ICAT quantitative approach. J Prot 74: 2498-2509
4. Lindermayr C, Saalbach G, Durner J (2005) Proteomic identifi cation of S-nitrosylated proteins in Arabidopsis. Plant Physiol 137: 921-930
5. Tanou G, Job C, Rajjou L et al (2009) Proteomics reveals the overlapping roles of hydrogen peroxide and nitric oxide in the acclimation of citrus plants to salinity. Plant J 60: 795-804
6. Abat JK, Deswal R (2009) Differential modulation of S-nitrosoproteome of Brassica juncea by low temperature: change in S-nitrosylation of Rubisco is responsible for the inactivation of its carboxylase activity. Proteomics 9: 4368-4380
7. Fares A, Rossignol M, Peltier JB (2011) Proteomics investigation of endogeneous S-nitrosylaion in Arabidopsis . Biochem Biophys Res Commun 416:331-336
8. Wells JM, McLuckey SA (2005) Collisioninduced dissociation (CID) of peptides and proteins. Methods Enzymol 402:148-185
9. Cox J, Mann M (2011) Quantitative, highresolution proteomics for data-driven systems biology. Annu Rev Biochem 80: 273-299
10. Choi H, Nesvizhskii AI (2008) False discovery rates and related statistical concepts in mass spectrometry-based proteomics. J Proteome Res 7:47-50
11. Reiter L, Claassen M, Schrimpf SP et al (2009) Protein identifi cation false discovery rates for very large proteomics data sets generated by tandem mass spectrometry. Mol Cell Proteomics 8:2405-2417