메뉴 건너뛰기




Volumn 16, Issue 1, 2015, Pages

Novel VPS13B Mutations in Three Large Pakistani Cohen Syndrome Families Suggests a Baloch Variant with Autistic-Like Features

(30)  Rafiq, Muhammad Arshad a,r   Leblond, Claire S b,s   Saqib, Muhammad Arif Nadeem c   Vincent, Akshita K a   Ambalavanan, Amirthagowri b,s   Khan, Falak Sher c   Ayaz, Muhammad d   Shaheen, Naseema e   Spiegelman, Dan b,s   Ali, Ghazanfar f   Amin ud din, Muhammad e   Laurent, Sandra b,s   Mahmood, Huda a   Christian, Mehtab b   Ali, Nadir c   Fennell, Alanna a   Nanjiani, Zohair g   Egger, Gerald a,h   Caron, Chantal i,j   Waqas, Ahmed c   more..


Author keywords

[No Author keywords available]

Indexed keywords

ADOLESCENT; ADULT; AMINO ACID SUBSTITUTION; ARTICLE; AUTISM; AUTOSOMAL RECESSIVE DISORDER; BALOCH (PEOPLE); CHILD; CLINICAL ARTICLE; CLINICAL ASSESSMENT; CLINICAL FEATURE; COHEN SYNDROME; COMPARATIVE STUDY; CONTROLLED STUDY; EXON; EYE DISEASE; FACE MALFORMATION; FEMALE; GENE; GENE DELETION; GENE MAPPING; GENE SEQUENCE; GENETIC ASSOCIATION; HAPLOTYPE; HOMOZYGOSITY; HUMAN; INTELLECTUAL IMPAIRMENT; MALE; MIDDLE AGED; MUTATIONAL ANALYSIS; NEUROLOGIC DISEASE; NIGHT BLINDNESS; PAKISTANI; PHENOTYPIC VARIATION; RETINA DYSTROPHY; SANGER SEQUENCING; SCHOOL CHILD; SINGLE NUCLEOTIDE POLYMORPHISM; VISUAL IMPAIRMENT; VPS13B GENE; WHOLE EXOME SEQUENCING; YOUNG ADULT; CASE REPORT; CLASSIFICATION; CONGENITAL MALFORMATION; DEVELOPMENTAL DISORDER; DNA SEQUENCE; ETHNOLOGY; FINGER; GENETICS; GENOTYPE; HOMOZYGOTE; MICROCEPHALY; MOLECULAR GENETICS; MULTIPLE MALFORMATION SYNDROME; MUSCLE HYPOTONIA; MYOPIA; NUCLEOTIDE SEQUENCE; OBESITY; PAKISTAN; PATHOLOGY; PEDIGREE; PHENOTYPE; RECESSIVE GENE;

EID: 84933512215     PISSN: None     EISSN: 14712350     Source Type: Journal    
DOI: 10.1186/s12881-015-0183-0     Document Type: Article
Times cited : (20)

References (34)
  • 1
    • 79851512087 scopus 로고    scopus 로고
    • Prevalence of intellectual disability: a meta-analysis of population-based studies
    • Maulik PK, Mascarenhas MN, Mathers CD, Dua T, Saxena S. Prevalence of intellectual disability: a meta-analysis of population-based studies. Res Dev Disabil. 2011;32(2):419-36.
    • (2011) Res Dev Disabil , vol.32 , Issue.2 , pp. 419-436
    • Maulik, P.K.1    Mascarenhas, M.N.2    Mathers, C.D.3    Dua, T.4    Saxena, S.5
  • 2
    • 33749465589 scopus 로고    scopus 로고
    • Diagnostic yield of various genetic approaches in patients with unexplained developmental delay or mental retardation
    • Rauch A, Hoyer J, Guth S, et al. Diagnostic yield of various genetic approaches in patients with unexplained developmental delay or mental retardation. Am J Med Genet. 2006;140A(19):2063-74.
    • (2006) Am J Med Genet , vol.140A , Issue.19 , pp. 2063-2074
    • Rauch, A.1    Hoyer, J.2    Guth, S.3
  • 3
    • 0015831045 scopus 로고
    • A new syndrome with hypotonia, obesity, mental deficiency, and facial, oral, ocular and limb anomalies
    • Cohen Jr MM, Hall BD, Smith DW, Graham CB, Lampert KJ. A new syndrome with hypotonia, obesity, mental deficiency, and facial, oral, ocular and limb anomalies. J Pediat. 1973;83(2):280-4.
    • (1973) J Pediat , vol.83 , Issue.2 , pp. 280-284
    • Cohen, M.M.1    Hall, B.D.2    Smith, D.W.3    Graham, C.B.4    Lampert, K.J.5
  • 4
    • 0035425580 scopus 로고    scopus 로고
    • Cohen Syndrome: Essential features, natural history, and heterogeneity
    • Kivitie-Kallio S, Norio R. Cohen Syndrome: Essential features, natural history, and heterogeneity. Am J Med Genet. 2001;102(2):125-35.
    • (2001) Am J Med Genet , vol.102 , Issue.2 , pp. 125-135
    • Kivitie-Kallio, S.1    Norio, R.2
  • 5
    • 0037374844 scopus 로고    scopus 로고
    • Diagnostic criteria, clinical characteristics, and natural history of Cohen syndrome
    • Chandler KE, Kidd A, Al-Gazali L, et al. Diagnostic criteria, clinical characteristics, and natural history of Cohen syndrome. J Med Genet. 2003;40(4):233-41.
    • (2003) J Med Genet , vol.40 , Issue.4 , pp. 233-241
    • Chandler, K.E.1    Kidd, A.2    Al-Gazali, L.3
  • 6
    • 79955579920 scopus 로고    scopus 로고
    • Clinical variability of genetic isolates of Cohen syndrome
    • Douzgou S, Peterson MB. Clinical variability of genetic isolates of Cohen syndrome. Clin Genet. 2011;79(6):501-6.
    • (2011) Clin Genet , vol.79 , Issue.6 , pp. 501-506
    • Douzgou, S.1    Peterson, M.B.2
  • 7
    • 0038353767 scopus 로고    scopus 로고
    • Cohen syndrome is caused by mutations in a novel gene, COH1, encoding a transmembrane protein with a presumed role in vesicle mediated sorting and intracellular protein transport
    • Kolehmainen J, Black GC, Saarinen A, et al. Cohen syndrome is caused by mutations in a novel gene, COH1, encoding a transmembrane protein with a presumed role in vesicle mediated sorting and intracellular protein transport. Am J Hum Genet. 2003;72(6):1359-69.
    • (2003) Am J Hum Genet , vol.72 , Issue.6 , pp. 1359-1369
    • Kolehmainen, J.1    Black, G.C.2    Saarinen, A.3
  • 8
    • 3042688326 scopus 로고    scopus 로고
    • Delineation of Cohen syndrome following a large-scale genotype-phenotype screen
    • Kolehmainen J, Wilkinson R, Lehesjoki AE, et al. Delineation of Cohen syndrome following a large-scale genotype-phenotype screen. Am J Hum Genet. 2004;75(1):122-7.
    • (2004) Am J Hum Genet , vol.75 , Issue.1 , pp. 122-127
    • Kolehmainen, J.1    Wilkinson, R.2    Lehesjoki, A.E.3
  • 9
    • 3042546822 scopus 로고    scopus 로고
    • Allelic heterogeneity in the COH1 gene explains clinical variability in Cohen syndrome
    • Hennies HC, Rauch A, Seifert W, et al. Allelic heterogeneity in the COH1 gene explains clinical variability in Cohen syndrome. Am J Hum Genet. 2004;75(1):138-45.
    • (2004) Am J Hum Genet , vol.75 , Issue.1 , pp. 138-145
    • Hennies, H.C.1    Rauch, A.2    Seifert, W.3
  • 10
    • 33745961896 scopus 로고    scopus 로고
    • Mutational spectrum of COH1 and clinical heterogeneity in Cohen syndrome
    • Seifert W, Holder-Espinasse M, Spranger S, et al. Mutational spectrum of COH1 and clinical heterogeneity in Cohen syndrome. J Med Genet. 2006;43(5):e22.
    • (2006) J Med Genet , vol.43 , Issue.5 , pp. e22
    • Seifert, W.1    Holder-Espinasse, M.2    Spranger, S.3
  • 11
    • 36448942590 scopus 로고    scopus 로고
    • Clinical and molecular characterization of Italian patients affected by Cohen syndrome
    • Katzaki E, Pescucci C, Uliana V, et al. Clinical and molecular characterization of Italian patients affected by Cohen syndrome. J Hum Genet. 2007;52(12):1011-7.
    • (2007) J Hum Genet , vol.52 , Issue.12 , pp. 1011-1017
    • Katzaki, E.1    Pescucci, C.2    Uliana, V.3
  • 12
    • 51449102096 scopus 로고    scopus 로고
    • Cohen syndrome resulting from a novel large intragenic COH1 deletion segregating in an isolated Greek island population
    • Bugiani M, Gyftodimou Y, Tsimpouka P, et al. Cohen syndrome resulting from a novel large intragenic COH1 deletion segregating in an isolated Greek island population. Am J MedGenet A. 2008;146A(17):2221-6.
    • (2008) Am J MedGenet A , vol.146A , Issue.17 , pp. 2221-2226
    • Bugiani, M.1    Gyftodimou, Y.2    Tsimpouka, P.3
  • 13
    • 69549118484 scopus 로고    scopus 로고
    • Deletions in the VPS13B (COH1) gene as a cause of Cohen syndrome. Hum Mutat
    • Balikova I, Lehesjoki AE, de Ravel TJ, et al. Deletions in the VPS13B (COH1) gene as a cause of Cohen syndrome. Hum Mutat. 2009;30(9):E845-54.
    • (2009) , vol.30 , Issue.9 , pp. E845-E854
    • Balikova, I.1    Lehesjoki, A.E.2    de Ravel, T.J.3
  • 14
    • 77956099264 scopus 로고    scopus 로고
    • Search for the best indicators for the presence of a VPS13B gene mutation and confirmation of diagnostic criteria in a series of 34 patients genotyped for suspected Cohen syndrome
    • El Chehadeh S, Aral B, Gigot N, et al. Search for the best indicators for the presence of a VPS13B gene mutation and confirmation of diagnostic criteria in a series of 34 patients genotyped for suspected Cohen syndrome. J Med Genet. 2010;47(8):549-53.
    • (2010) J Med Genet , vol.47 , Issue.8 , pp. 549-553
    • Chehadeh, S.1    Aral, B.2    Gigot, N.3
  • 15
    • 79551623751 scopus 로고    scopus 로고
    • Cohen syndrome diagnosis using whole genome arrays
    • Rivera-Brugu'es N, Albrecht B, Wieczorek D, et al. Cohen syndrome diagnosis using whole genome arrays. J Med Genet. 2011;48(2):136-40.
    • (2011) J Med Genet , vol.48 , Issue.2 , pp. 136-140
    • Rivera-Brugu'es, N.1    Albrecht, B.2    Wieczorek, D.3
  • 16
    • 77957154320 scopus 로고    scopus 로고
    • High frequency of COH1intragenic deletions and duplications detected by MLPA inpatients with Cohen syndrome
    • Parri V, Katzaki E, Uliana V, et al. High frequency of COH1intragenic deletions and duplications detected by MLPA inpatients with Cohen syndrome. Eur J Hum Genet. 2010;18(10):1133-40.
    • (2010) Eur J Hum Genet , vol.18 , Issue.10 , pp. 1133-1140
    • Parri, V.1    Katzaki, E.2    Uliana, V.3
  • 17
    • 84879411756 scopus 로고    scopus 로고
    • Changing facial phenotype in Cohen syndrome: towards clues for an earlier diagnosis
    • El Chehadeh-Djebbar S, Blair E, Holder-Espinasse M, et al. Changing facial phenotype in Cohen syndrome: towards clues for an earlier diagnosis. Eur J Hum Genet. 2013;21(7):736-42.
    • (2013) Eur J Hum Genet , vol.21 , Issue.7 , pp. 736-742
    • Chehadeh-Djebbar, S.1    Blair, E.2    Holder-Espinasse, M.3
  • 18
    • 84892883226 scopus 로고    scopus 로고
    • Congenital neutropenia with retinopathy, a new phenotype without intellectual deficiency or obesity secondary to VPS13B mutations
    • Gueneau L, Duplomb L, Sarda P, et al. Congenital neutropenia with retinopathy, a new phenotype without intellectual deficiency or obesity secondary to VPS13B mutations. Am J Med Genet A. 2014;164A(2):522-7.
    • (2014) Am J Med Genet A , vol.164A , Issue.2 , pp. 522-527
    • Gueneau, L.1    Duplomb, L.2    Sarda, P.3
  • 19
    • 0018854085 scopus 로고
    • Toward objective classification of childhood autism: Childhood Autism Rating Scale (CARS)
    • Schopler E, Reichler RJ, DeVellis RF, Daly K. Toward objective classification of childhood autism: Childhood Autism Rating Scale (CARS). J Autism Dev Disord. 1980;10(1):91-103.
    • (1980) J Autism Dev Disord , vol.10 , Issue.1 , pp. 91-103
    • Schopler, E.1    Reichler, R.J.2    DeVellis, R.F.3    Daly, K.4
  • 22
    • 67849083083 scopus 로고    scopus 로고
    • HomozygosityMapper--an interactive approach to homozygosity mapping
    • Web Server issue
    • Seelow D, Schuelke M, Hildebrandt F, Nürnberg P. HomozygosityMapper--an interactive approach to homozygosity mapping. Nucleic Acids Res. 2009;37(Web Server issue):W593-599.
    • (2009) Nucleic Acids Res , vol.37 , pp. W593-599
    • Seelow, D.1    Schuelke, M.2    Hildebrandt, F.3    Nürnberg, P.4
  • 23
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler Transform
    • Li H, Durbin R. Fast and accurate short read alignment with Burrows-Wheeler Transform. Bioinformatics. 2009;25(14):1754-60.
    • (2009) Bioinformatics , vol.25 , Issue.14 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 25
    • 77956534324 scopus 로고    scopus 로고
    • ANNOVAR: Functional annotation of genetic variants from next-generation sequencing data
    • Wang K, Li M, Hakonarson H. ANNOVAR: Functional annotation of genetic variants from next-generation sequencing data. Nucleic Acids Res. 2010;38(16):e164.
    • (2010) Nucleic Acids Res , vol.38 , Issue.16 , pp. e164
    • Wang, K.1    Li, M.2    Hakonarson, H.3
  • 26
    • 0028070381 scopus 로고
    • Limits of resolution of genetic linkage studies: implications for the positional cloning of human disease genes
    • Boehnke M. Limits of resolution of genetic linkage studies: implications for the positional cloning of human disease genes. Am J Hum Genet. 1994;55(2):379-90.
    • (1994) Am J Hum Genet , vol.55 , Issue.2 , pp. 379-390
    • Boehnke, M.1
  • 27
    • 0029833575 scopus 로고    scopus 로고
    • Allele-specific suppression of a defective trans-Golgi network (TGN) localization signal in Kex2p identifies three genes involved in localization of TGN transmembrane proteins
    • Redding K, Brickner JH, Marschall LG, et al. Allele-specific suppression of a defective trans-Golgi network (TGN) localization signal in Kex2p identifies three genes involved in localization of TGN transmembrane proteins. Mol Cell Biol. 1996;16(11):6208-17.
    • (1996) Mol Cell Biol , vol.16 , Issue.11 , pp. 6208-6217
    • Redding, K.1    Brickner, J.H.2    Marschall, L.G.3
  • 28
    • 64049096972 scopus 로고    scopus 로고
    • Expanded mutational spectrum in Cohen syndrome, tissue expression, and transcript variants of COH1
    • Seifert W, Holder-Espinasse M, Kühnisch J, et al. Expanded mutational spectrum in Cohen syndrome, tissue expression, and transcript variants of COH1. Hum Mutat. 2009;30(2):E404-20.
    • (2009) Hum Mutat , vol.30 , Issue.2 , pp. E404-E420
    • Seifert, W.1    Holder-Espinasse, M.2    Kühnisch, J.3
  • 29
    • 80054805821 scopus 로고    scopus 로고
    • Cohen syndrome-associated protein, COH1, is a novel, giant Golgi matrix protein required for Golgi integrity
    • Seifert W, Kühnisch J, Maritzen T, et al. Cohen syndrome-associated protein, COH1, is a novel, giant Golgi matrix protein required for Golgi integrity. J Biol Chem. 2011;286(43):37665-75.
    • (2011) J Biol Chem , vol.286 , Issue.43 , pp. 37665-37675
    • Seifert, W.1    Kühnisch, J.2    Maritzen, T.3
  • 30
    • 84897550725 scopus 로고    scopus 로고
    • Cohen syndrome is associated with major glycosylation defects
    • Duplomb L, Duvet S, Picot D, et al. Cohen syndrome is associated with major glycosylation defects. Hum Mol Genet. 2014;23(9):2391-9.
    • (2014) Hum Mol Genet , vol.23 , Issue.9 , pp. 2391-2399
    • Duplomb, L.1    Duvet, S.2    Picot, D.3
  • 31
    • 84867850145 scopus 로고    scopus 로고
    • NMD: a multifaceted response to premature translational termination
    • Kervestin S, Jacobson A. NMD: a multifaceted response to premature translational termination. Nat Rev Mol Cell Biol. 2012;13(11):700-12.
    • (2012) Nat Rev Mol Cell Biol , vol.13 , Issue.11 , pp. 700-712
    • Kervestin, S.1    Jacobson, A.2
  • 32
    • 84872696957 scopus 로고    scopus 로고
    • Using whole exome sequencing to identify inherited causes of autism
    • Yu TW, Chahrour MH, Coulter ME, et al. Using whole exome sequencing to identify inherited causes of autism. Neuron. 2013;77(2):259-73.
    • (2013) Neuron , vol.77 , Issue.2 , pp. 259-273
    • Yu, T.W.1    Chahrour, M.H.2    Coulter, M.E.3
  • 33
    • 84919629968 scopus 로고    scopus 로고
    • Identification of Rare Causal Variants in Sequence-Based Studies: Methods and Applications to VPS13B, a Gene Involved in Cohen Syndrome and Autism. Zeggini E, ed
    • Ionita-Laza I, Capanu M, De Rubeis S, McCallum K, Buxbaum JD. Identification of Rare Causal Variants in Sequence-Based Studies: Methods and Applications to VPS13B, a Gene Involved in Cohen Syndrome and Autism. Zeggini E, ed. PLoS Genetics. 2014;10(12):e1004729. doi: 10.1371/journal.pgen.1004729 .
    • (2014) PLoS Genetics , vol.10 , Issue.12 , pp. e1004729
    • Ionita-Laza, I.1    Capanu, M.2    Rubeis, S.3    McCallum, K.4    Buxbaum, J.D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.