Foodomics for investigations of food toxins

Current Opinion in Food Science

Volumn 4, Issue , 2015, Pages 86-91

  Rešetar, Dina ^a   Pavelić, Sandra Kraljević ^a   Josić, Djuro ^a,b  

^a University of Rijeka   (Croatia)

^b BROWN UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84932643054     PISSN: 22147993     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cofs.2015.05.004     Document Type: Review

References (61)

1. Cifuentes A. Food analysis and foodomics. J Chromatogr A 2009, 1216:7109.
2. Simó C., Domínguez-Vega E., Marina M.L., García M.C., Dinelli G., Cifuentes A. CE-TOF MS analysis of complex protein hydrolyzates from genetically modified soybeans. A tool for foodomics. Electrophoresis 2010, 31:1175-1183.
3. Ibáñez C., Valdés A., García-Cañas V., Simó C., Celebier M., Rocamora L., Gómez A., Herrero M., Castro M., Segura-Carretero A., et al. Global foodomics strategy to investigate the health benefits of dietary constituents. J Chromatogr A 2012, 1248:139-153.
4. Akhtar S., Sarker M.R., Hossain A. Microbiological food safety: a dilemma of developing societies. Crit Rev Microbiol 2012, 40:348-359.
5. WHO, 2006. http://www.who.int/foodsafety/foodborne_disease/ferg/en/.
6. Havelaar A.H., Brul S., Jong A., Jonge R., Zwietering M.H., Kuile B.H. Future challenges to microbial food safety. Int J Food Microbiol 2010, 139:79-94.
7. Giacometti J., Buretić Tomljanović A., Josic D.J. Application of proteomics and metabolomics for investigation of food toxins. Food Res Int 2013, 54:1042-1051.
8. Rajković A. Microbial toxins and low level of foodborne exposure. Trends Food Sci Tech 2014, 38:149-157.
9. Henkel J.S., Baldwin M.R., Barbieri J.T. Toxins from bacteria. EXS 2010, 100:1-29.
10. EFSA The European Union summary report on trends and sources of zoonoses, zoonotic agents and food-borne outbreaks in 2013. EFSA J 2015, 13:1-162.
11. Peck M.W., Stringer S.C., Carter A.T. Clostridium botulinum in the post-genomic era. Food Microbiol 2011, 28:183-191.
12. Grumanna D., Nübelb U., Bröker B.M. Staphylococcus aureus toxins - their functions and genetics. Infect Genet Evol 2014, 21:583-592.
13. Gustafson J.E., Muthaiyan A., Dupre J.M., Ricke S.C. Staphylococcus aureus and understanding the factors that impact enterotoxin production in foods: a review. Food Control 2014, 10.1016/j.foodcont.2014.10.016.
14. Fleckenstein J.M., Hardwidge P.R., Munson G.P., Rasko D.A., Sommerfelt H., Steinsland H. Molecular mechanisms of enterotoxigenic Escherichia coli infection. Microbes Infect 2010, 12:89-98.
15. Ceuppens S., Rajkovic A., Hamelink S., van De Wiele T., Boon N., Uyttendaele M. Enterotoxin production by Bacillus cereus under gastrointestinal conditions and their immunological detection by commercially available kits. Foodborne Pathog 2012, 9:1130-1136.
16. Senesi S., Ghelardi E. Production, secretion and biological activity of Bacillus cereus enterotoxins. Toxins 2010, 2:1690-1703.
17. Ceuppens S., Uyttendaele M., Drieskens K., Rajkovic A., Boon N., van DeWiele T. Survival of Bacillus cereus vegetative cells and spores during in vitro simulation of gastric passage. J Food Prot 2012, 75:690-694.
18. Marxen S., Stark T.D., Frenzel E., Rütschle A., Lücking G., Pürstinger G., Pohl E.E., Scherer S., Ehling-Schulz M., Hofmann T. Chemodiversity of cereulide, the emetic toxin of Bacillus cereus. Anal Bioanal Chem 2015, 407:2439-2453.
19. Stenfors Arnesen L.P., Fagerlund A., Granum P.E. From soil to gut: Bacillus cereus and its food poisoning toxins. FEMS Microbiol Rev 2008, 32:579-606.
20. Hou H.J.M. Analysis of botulinum neurotoxin detection by mass spectrometry in forensic samples. J Forensic Res 2013, 4:2-6.
21. Giacometti J., Josic D.J. Foodomics in microbial safety. Trend Anal Chem 2013, 52:16-22.
22. Adley C.C. Past, present and future of sensors in food production. Foods 2014, 3:491-510.
23. Yeni F., Acar S., Polat Ö.G., Soyer Y., Alpas H. Rapid and standardized methods for detection of foodborne pathogens and mycotoxins on fresh produce. Food Control 2014, 40:359-367.
24. Zhang C., Zhang J. Current techniques for detecting and monitoring algal toxins and causative harmful algal blooms. J Environ Anal Chem 2015, 10.4172/JREAC.1000123.
25. Hu D.L., Omoe K., Shimoda Y., Nakane A., Shinagawa K. Induction of emetic response to staphylococcal enterotoxins in the House Musk Shrew (Suncus murinus). Infect Immun 2003, 71:567-570.
26. Ikeda T., Tamate N., Yamaguchi K., Makino S. Mass outbreak of food poisoning disease caused by small amounts of staphylococcal enterotoxins A and H. Appl Environ Microbiol 2005, 71:2793-2795.
27. Zhao X., Lin C.W., Wang J., Oh D.H. Advances in rapid detection methods for foodborne pathogens. J Microbiol Biotechnol 2014, 24:297-312.
28. Hennekinne J.A., Ostyn A., Guillier F., Herbin S., Prufer A.L., Dragacci S. How should staphylococcal food poisoning outbreaks be characterized?. Toxins 2010, 2:2106-2116.
29. Kim Y., Nanadakumar M.P., Marten M.R. The state of proteome profiling in the fungal genus Aspergillus. Brief Funct Genomic Proteomic 2008, 7:87-94.
30. Yang F.E.N., Jensen J.D., Svensson B., Jørgensen H.J.L., Collinge D.B., Finnie C. Secretomics identifies Fusarium graminearum proteins involved in the interaction with barley and wheat. Mol Plant Pathol 2012, 13:445-453.
31. García-Cañas V., Simó C., Herrero M., Ibáñez E., Cifuentes A. Present and future challenges in food analysis. Foodomics Anal Chem 2012, 84:10150-10159.
32. Cunsolo V., Muccilli V., Saletti R., Foti S. Mass spectrometry in food proteomics: a tutorial. J Mass Spectrom 2014, 49:768-784.
33. Bakker H.C., Allard M.W., Bopp D., Brown E.W., Fontana J., Iqbal Z., Kinney A., Limberger R., Musser K.A., Shudt M., et al. Rapid whole-genome sequencing for surveillance of Salmonella enterica serovar enteritidis. Emerg Infect Dis 2014, 20:1306-1314.
34. Bergholz T.M., Moreno Switt A.I., Wiedmann M. Omics approaches in food safety: fulfiling the promise?. Trends Microbiol 2014, 22:275-281.
35. García-Cañas V., González R., Cifuentes A. Combined use of molecular techniques and capillary electrophoresis in food analysis. TRAC-Trend Anal Chem 2004, 23:637-643.
36. Alarcón B., García-Cañas V., Cifuentes A., González R., Aznar R. Simultaneous and sensitive detection of three food-borne pathogens by multiplex PCR, capillary gel electrophoresis and laser induced fluorescence. J Agric Food Chem 2004, 52:7180-7186.
37. García-Cañas V., Cifuentes A. Detection of microbial food contaminants and their products by capillary electromigration techniques. Electrophoresis 2007, 28:4013-4030.
38. Berthiller F., Brera C., Crews C., Iha M.H., Krska R., Lattanzio V.M.T., MacDonald S., Malone R.J., Maragos C., Solfrizzo M., Stroka J., Whitaker T.B. Developments in mycotoxin analysis: an update for 2013-2014. World Mycotoxin J 2015, 8:5-36.
39. Hird S.J., Lau B.P.Y., Schuhmacher R., Krska R. Liquid chromatography-mass spectrometry for the determination of chemical contaminants in food. Trends Anal Chem 2014, 59:59-72.
40. Sauer S., Kliem M. Mass spectrometry tools for the classification and identification of bacteria. Nat Rev Microbiol 2010, 8:74-82.
41. Schumann P., Maier T. MALDI-TOF mass spectrometry applied to classification and identification of bacteria. Method Microbiol 2014, 41:275-306.
42. Novais A., Sousa C., de Dios Caballero J., Fernandez-Olmos A., Lopes J., Ramos H., Coque T.M., Cantón R., Peixe L. MALDI-TOF mass spectrometry as a tool for the discrimination of high-risk Escherichia coli clones from phylogenetic groups B2 (ST131) and D (ST69, ST405, ST393). Eur J Clin Microbiol 2014, 33:1391-1399.
43. Böhme K., Fernández-No I.C., Barros-Velázquez J., Gallardo J.M., Canas B., Calo-Mata P. Comparative analysis of protein extraction methods for the identification of seafood-borne pathogenic and spoilage bacteria by MALDI-TOF mass spectrometry. Anal Methods 2010, 2:1941-1947.
44. Böhme K., Fernández-No I.C., Barros-Velázquez J., Gallardo J.M., Calo-Mata P., Canas B. Species differentiation of seafood spoilage and pathogenic gram-negative bacteria by MALDI-TOF mass fingerprinting. J Proteome Res 2010, 9:3169-3183.
45. AlMasoud N., Nicolaou N., Goodacre R. Optimization of matrix assisted desorption/ionization time of flight mass spectrometry (MALDI-TOF-MS) for the characterization of Bacillus and Brevibacillus species. Anal Chim Acta 2014, 840:49-57.
46. Fernandez-No I.C., Bohme K., Gallardo J.M., Barros-Velazquez J., Canas B., Calo-Mata P. Differential characterization of biogenic amine-producing bacteria involved in food poisoning using MALDI-TOF mass fingerprinting. Electrophoresis 2010, 31:1116-1127.
47. Bohme K., Fernandez-No I.C., Barros-Velazquez J., Gallardo J.M., Canas B., Calo-Mata P. SpectraBank: an open access tool for rapid microbial identification by MALDI-TOF MS fingerptinting. Electrophoresis 2012, 33:2138-2140.
48. Hamid A.M., Jarmusch A.K., Pirro V., Pincus D.H., Clay B.G., Gervasi G., Cooks R.G. Rapid discrimination of bacteria by paper spray mass spectrometry. Anal Chem 2014, 86:7500-7507.
49. McFarland M.A., Andrzejewski D., Musser S.M., Callahan J.H. Platform for identification of Salmonella serovar differentiating bacterial proteins by top-down mass spectrometry: S. Typhimurium vs S. Heidelberg. Anal Chem 2014, 86:6879-6886.
50. O'Brien J.P., Needham B.D., Henderson J.C., Nowicki E.M., Trent M.S., Brodbelt J.S. 193 nm ultraviolet photodissociation mass spectrometry for the structural elucidation of lipid A compounds in complex mixtures. Anal Chem 2014, 86:2138-2145.
51. Pizzutti I.R., De Kok A., Scholten J., Righi L.W., Cardoso C.D., NecchiRohers G., Da Silva R.C. Development, optimization and validation of a multimethod for the determination of 36 mycotoxins in wines by liquid chromatography-tandem mass spectrometry. Talanta 2014, 129:352-363.
52. Dzuman Z., Zachariasova M., Lacina O., Veprikova Z., Slavikova P., Hajslova J. A rugged high-throughput analytical approach for the determination and quantification of multiple mycotoxins in complex feed matrices. Talanta 2014, 121:263-272.
53. Boundy M.J., Selwood A.I., Harwood D.T., McNabb P.S., Turner A.D. Development of a sensitive and selective liquid chromatography-mass spectrometry method for high throughput analysis of paralytic shellfish toxins using graphitised carbon solidphase extraction. J Chromatogr A 2015, 1387:1-12.
54. Janga K.S., Sweredoskib M.J., Grahamb R.L.J., Hessb S., Clemons W.M. Comprehensive proteomic profiling of outer membrane vesicles from Campylobacter jejuni. J Proteomics 2014, 98:90-98.
55. Bauer T., Stark T., Hofmann T., Ehling-Schulz M. Development of a stable isotope dilution analysis for the quantification of the Bacillus cereus toxin cereulide in foods. J Agric Food Chem 2010, 58:1420-1428.
56. Muratovic A.Z., Tröger R., Granelli K., Hellenäs K.E. Quantitative analysis of cereulide toxin from Bacillus cereus in rice and pasta using synthetic cereulide standard and 13C6-cereulide standard-a short validation study. Toxins 2014, 6:3326-3335.
57. Lanucara F., Holman S.W., Gray C.J., Eyers C.E. The power of ion mobility-mass spectrometry for structural characterization and the study of conformational dynamics. Nat Chem 2014, 6:281-294.
58. Castro-Puyana M., García-Canas V., Simó C., Cifuentes A. Recent advances in the application of capillary electromigration methods for food analysis and foodomics. Electrophoresis 2012, 33:147-167.
59. Hancu G., Simon B., Rusu A., Mircia E., Gyéresi Á. Principles of micellar electrokinetic capillary chromatography applied in pharmaceutical analysis. Adv Pharm Bull 2013, 3:1-8.
60. Murillo-Arbizu M., González-Penas E., Amézqueta S. Patulin in apple juice for infants. Food Chem Toxicol 2010, 48:2429-2434.
61. Oh M.H., Cox J.M. Development and application of a centrifugation-plating method to study the biodiversity of Bacillus species in rice products. Food Control 2010, 21:652-665.