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Volumn 51, Issue 3, 2015, Pages 340-349

NMR-based metabolomics profile comparisons to distinguish between embryogenic and non-embryogenic callus tissue of sugarcane at the biochemical level

Author keywords

Embryogenic callus; NMR based metabolomics; Non embryogenic callus; Pathway analysis; Sugarcane

Indexed keywords


EID: 84931567853     PISSN: 10545476     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11627-015-9687-8     Document Type: Article
Times cited : (26)

References (36)
  • 1
    • 9744272882 scopus 로고    scopus 로고
    • Gene transfer in sugarcane
    • Biotechnology of food crops in developing countries, Plant Gene Research
    • Arencibia A (1999) Gene transfer in sugarcane. In: Hohn T, Leisinger KM (eds) Biotechnology of food crops in developing countries. Plant Gene Research, pp 79–104
    • (1999) Hohn T , pp. 79-104
    • Arencibia, A.1    Leisinger, K.M.2
  • 3
    • 0036015590 scopus 로고    scopus 로고
    • Differential carbohydrate metabolism conducts morphogenesis in embryogenic callus of Hevea brasiliensis (Müll. Arg.)
    • COI: 1:CAS:528:DC%2BD38XktlWjtbw%3D, PID: 12021293
    • Blanc G, Lardet L, Martin A, Jacob JL, Carron MP (2002) Differential carbohydrate metabolism conducts morphogenesis in embryogenic callus of Hevea brasiliensis (Müll. Arg.). J Exp Bot 53:1453–1462
    • (2002) J Exp Bot , vol.53 , pp. 1453-1462
    • Blanc, G.1    Lardet, L.2    Martin, A.3    Jacob, J.L.4    Carron, M.P.5
  • 4
    • 33845261493 scopus 로고
    • A rapid method of total lipid extraction and purification
    • COI: 1:CAS:528:DyaG1MXhtVSgt70%3D, PID: 13671378
    • Bligh EG, Dyer WJ (1959) A rapid method of total lipid extraction and purification. Can J Biochem Physiol 37:911–917
    • (1959) Can J Biochem Physiol , vol.37 , pp. 911-917
    • Bligh, E.G.1    Dyer, W.J.2
  • 5
    • 0032228570 scopus 로고    scopus 로고
    • Soluble carbohydrate of soybean [Glycine max (L.) Merr.] somatic and zygotic embryos during development
    • COI: 1:CAS:528:DyaK1cXisVSktLw%3D
    • Chanprame S, Kuo TM, Widholm JM (1998) Soluble carbohydrate of soybean [Glycine max (L.) Merr.] somatic and zygotic embryos during development. In Vitro Cell Dev Biol Plant 34:64–68
    • (1998) In Vitro Cell Dev Biol Plant , vol.34 , pp. 64-68
    • Chanprame, S.1    Kuo, T.M.2    Widholm, J.M.3
  • 7
    • 0002903017 scopus 로고
    • Influence of some exogenous amino acids on the production of maize embryogenic callus and on endogenous amino acid content
    • COI: 1:CAS:528:DyaK2cXht12ltr0%3D
    • Claparols I, Santos MA, Torne JM (1993) Influence of some exogenous amino acids on the production of maize embryogenic callus and on endogenous amino acid content. Plant Cell Tissue Organ Cult 34:1–11
    • (1993) Plant Cell Tissue Organ Cult , vol.34
    • Claparols, I.1    Santos, M.A.2    Torne, J.M.3
  • 8
    • 20444505461 scopus 로고
    • Role of protein metabolism constituents in somatic embryo formation in cumin
    • COI: 1:CAS:528:DyaK28XktlCgtA%3D%3D
    • Dave A, Batra A (1995) Role of protein metabolism constituents in somatic embryo formation in cumin. Indian J Plant Physiol 38:25–27
    • (1995) Indian J Plant Physiol , vol.38 , pp. 25-27
    • Dave, A.1    Batra, A.2
  • 9
    • 0001413420 scopus 로고    scopus 로고
    • Metabolite profiling by one- and two-dimensional NMR analysis of complex mixtures
    • COI: 1:CAS:528:DyaK28XhslKgsL0%3D
    • Fan TWM (1996) Metabolite profiling by one- and two-dimensional NMR analysis of complex mixtures. Prog Nucl Magn Reson Spectrosc 28:161–219
    • (1996) Prog Nucl Magn Reson Spectrosc , vol.28 , pp. 161-219
    • Fan, T.W.M.1
  • 10
    • 80055065219 scopus 로고    scopus 로고
    • Quantification and statistical significance analysis of group separation in NMR-based metabonomics studies
    • COI: 1:CAS:528:DC%2BC3MXhsVamsb7F
    • Goodpaster AM, Kennedy MA (2011) Quantification and statistical significance analysis of group separation in NMR-based metabonomics studies. Chemometr Intell Lab Syst 109:162–170
    • (2011) Chemometr Intell Lab Syst , vol.109 , pp. 162-170
    • Goodpaster, A.M.1    Kennedy, M.A.2
  • 11
    • 0000981310 scopus 로고
    • Somatic embryogenesis in sugarcane (Saccharum officinarum L.) I. The morphology and physiology of callus formation and the ontogeny of somatic embryos
    • Ho WJ, Vasil IK (1983) Somatic embryogenesis in sugarcane (Saccharum officinarum L.) I. The morphology and physiology of callus formation and the ontogeny of somatic embryos. Protoplasma 118:169–180
    • (1983) Protoplasma , vol.118 , pp. 169-180
    • Ho, W.J.1    Vasil, I.K.2
  • 12
    • 20444462825 scopus 로고    scopus 로고
    • Biochemical studies of embryogenic and non-embryogenic callus of Cardiospermum halicacabum L
    • COI: 1:STN:280:DC%2BD2MzktVWqsw%3D%3D, PID: 15991583
    • Jeyaseelan M, Rao MV (2005) Biochemical studies of embryogenic and non-embryogenic callus of Cardiospermum halicacabum L. Indian J Exp Biol 43:555–560
    • (2005) Indian J Exp Biol , vol.43 , pp. 555-560
    • Jeyaseelan, M.1    Rao, M.V.2
  • 13
    • 0002336650 scopus 로고
    • On the current understanding of somaclonal variation
    • Miflin HF, (ed), Oxford University Press, New York
    • Karp A (1991) On the current understanding of somaclonal variation. In: Miflin HF (ed) Oxford surveys of plant molecular and cell biology. Oxford University Press, New York, pp 1–58
    • (1991) Oxford surveys of plant molecular and cell biology
    • Karp, A.1
  • 14
    • 77749320523 scopus 로고    scopus 로고
    • NMR-based metabolomic analysis of plants
    • COI: 1:CAS:528:DC%2BC3cXislOmsb4%3D, PID: 20203669
    • Kim HK, Choi YH, Verpoorte R (2010) NMR-based metabolomic analysis of plants. Nat Protoc 5:536–549. doi:10.1038/nprot.2009.237
    • (2010) Nat Protoc , vol.5 , pp. 536-549
    • Kim, H.K.1    Choi, Y.H.2    Verpoorte, R.3
  • 15
    • 38349041619 scopus 로고    scopus 로고
    • Genetic discrimination between Catharanthus roseus cultivars by metabolic fingerprinting using 1 h NMR spectra of aromatic compounds
    • COI: 1:CAS:528:DC%2BD1cXksFOqtw%3D%3D
    • Kim SW, Ban SH, Jeong SC (2007) Genetic discrimination between Catharanthus roseus cultivars by metabolic fingerprinting using 1 h NMR spectra of aromatic compounds. Biotechnol Bioprocess Eng 12:646–652
    • (2007) Biotechnol Bioprocess Eng , vol.12 , pp. 646-652
    • Kim, S.W.1    Ban, S.H.2    Jeong, S.C.3
  • 16
    • 77956608548 scopus 로고    scopus 로고
    • NMR metabolomics of esca disease-affected Vitis vinifera cv. Alvarinho leaves
    • COI: 1:CAS:528:DC%2BC3cXhtFGhtrvF, PID: 20709726
    • Lima MRM, Felgueiras ML, Gracxa G (2010) NMR metabolomics of esca disease-affected Vitis vinifera cv. Alvarinho leaves. J Exp Bot 61:4033–4042
    • (2010) J Exp Bot , vol.61 , pp. 4033-4042
    • Lima, M.R.M.1    Felgueiras, M.L.2    Gracxa, G.3
  • 17
    • 0028796392 scopus 로고
    • Effects of auxins, cytokinins, carbohydrates and amino acids on somatic embryogenesis induction from shoot apices of pea
    • COI: 1:CAS:528:DyaK2MXnvV2ku7o%3D
    • Loiseau J, Marche C, Deunff YL (1995) Effects of auxins, cytokinins, carbohydrates and amino acids on somatic embryogenesis induction from shoot apices of pea. Plant Cell Tissue Organ Cult 41:267–275
    • (1995) Plant Cell Tissue Organ Cult , vol.41 , pp. 267-275
    • Loiseau, J.1    Marche, C.2    Deunff, Y.L.3
  • 18
    • 0001090053 scopus 로고
    • Somatic embryogenesis in Zea mays L
    • COI: 1:STN:280:DC%2BC2c3gsVSqtw%3D%3D, PID: 24270557
    • Lu C, Vasil IK, Ozias-Akins P (1982) Somatic embryogenesis in Zea mays L. Theor Appl Genet 62:109–112
    • (1982) Theor Appl Genet , vol.62 , pp. 109-112
    • Lu, C.1    Vasil, I.K.2    Ozias-Akins, P.3
  • 19
    • 18944391960 scopus 로고    scopus 로고
    • Role of antioxidants and amino acids on somatic embryogenesis of Pinus patula
    • Malabadi RB, Staden JV (2011) Role of antioxidants and amino acids on somatic embryogenesis of Pinus patula. In Vitro Cell Dev Biol Plant 41:181–186
    • (2011) In Vitro Cell Dev Biol Plant , vol.41 , pp. 181-186
    • Malabadi, R.B.1    Staden, J.V.2
  • 20
    • 84982358134 scopus 로고
    • A revised medium for rapid growth and bioassays with tobacco tissue cultures
    • COI: 1:CAS:528:DyaF3sXksFKm
    • Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol Plant 15:473–497
    • (1962) Physiol Plant , vol.15 , pp. 473-497
    • Murashige, T.1    Skoog, F.2
  • 23
    • 85018114535 scopus 로고    scopus 로고
    • Trends in plant tissue culture and biotechnology. Published by Agrobios, Jodhpur
    • Pareek LK (2005) Trends in plant tissue culture and biotechnology. Published by Agrobios, Jodhpur. ISBN 10: 8177540890 / ISBN 13: 9788177540895
    • (2005) ISBN 10: 8177540890 / ISBN , vol.13
    • Pareek, L.K.1
  • 24
    • 85018130935 scopus 로고    scopus 로고
    • Pulse Program Catalogue. In: NMRGuide4.0
    • Parella T (2004) Pulse Program Catalogue. In: NMRGuide4.0. Bruker BioSpin GmbH
    • (2004) Bruker BioSp
    • Parella, T.1
  • 25
    • 84863489604 scopus 로고    scopus 로고
    • Induction of somatic embryogenesis and genetic fidelity of endangered medicinal herb Curculigo orchioides Gaertn
    • Patel S, Jasrai YT, Adiyecha R (2011) Induction of somatic embryogenesis and genetic fidelity of endangered medicinal herb Curculigo orchioides Gaertn. Res Plant Biol 1:48–52
    • (2011) Res Plant Biol , vol.1 , pp. 48-52
    • Patel, S.1    Jasrai, Y.T.2    Adiyecha, R.3
  • 28
    • 0030424326 scopus 로고    scopus 로고
    • Regeneration of plants via somatic embryogenesis from leafbase and leaf tip segments of Echinochloa colona
    • Samantaray S, Rout GR, Das P (1997) Regeneration of plants via somatic embryogenesis from leafbase and leaf tip segments of Echinochloa colona. Plant Cell Tissue Organ Cult 47:119–125
    • (1997) Plant Cell Tissue Organ Cult , vol.47 , pp. 119-125
    • Samantaray, S.1    Rout, G.R.2    Das, P.3
  • 29
    • 0001619450 scopus 로고
    • Growth and organized development of cultured cells. I. Growth and division of freely suspended cells
    • Steward F, Mapes M, Smith J (1958) Growth and organized development of cultured cells. I. Growth and division of freely suspended cells. Am J Bot 45:693–703
    • (1958) Am J Bot , vol.45 , pp. 693-703
    • Steward, F.1    Mapes, M.2    Smith, J.3
  • 30
    • 2442570005 scopus 로고    scopus 로고
    • Regulation of phosphatidylcholine biosynthesis under salt stress involves choline kinases in Arabidopsis thaliana
    • COI: 1:CAS:528:DC%2BD2cXktVOlurg%3D, PID: 15147879
    • Tasseva G, Richard L, Zachowski A (2004) Regulation of phosphatidylcholine biosynthesis under salt stress involves choline kinases in Arabidopsis thaliana. FEBS Lett 566:115–120
    • (2004) FEBS Lett , vol.566 , pp. 115-120
    • Tasseva, G.1    Richard, L.2    Zachowski, A.3
  • 31
    • 84948251158 scopus 로고
    • Developing cell and tissue culture systems for the improvement of cereals and grass crops
    • Vasil IK (1987) Developing cell and tissue culture systems for the improvement of cereals and grass crops. J Plant Physiol 128:192–218
    • (1987) J Plant Physiol , vol.128 , pp. 192-218
    • Vasil, I.K.1
  • 32
    • 0000244454 scopus 로고
    • Somatic embryogenesis: factors influencing coordinated behaviour of cells as an embryogenic group
    • Williams EG, Maheswaran G (1986) Somatic embryogenesis: factors influencing coordinated behaviour of cells as an embryogenic group. Ann Bot 57:443–462
    • (1986) Ann Bot , vol.57 , pp. 443-462
    • Williams, E.G.1    Maheswaran, G.2
  • 33
    • 36148989929 scopus 로고    scopus 로고
    • High-throughput tissue extraction protocol for NMR- and MS-based metabolomics
    • COI: 1:CAS:528:DC%2BD2sXhtlGjtb%2FL, PID: 17963684
    • Wu H, Southam AD, Hines A, Viant MR (2008) High-throughput tissue extraction protocol for NMR- and MS-based metabolomics. Anal Biochem 372:204–212. doi:10.1016/j.ab.2007.10.002
    • (2008) Anal Biochem , vol.372 , pp. 204-212
    • Wu, H.1    Southam, A.D.2    Hines, A.3    Viant, M.R.4
  • 34
    • 41949140581 scopus 로고    scopus 로고
    • Improved identification of metabolites in complex mixtures using HSQC NMR spectroscopy
    • COI: 1:CAS:528:DC%2BD1cXkvV2ksLs%3D, PID: 18420042
    • Xi Y, de Ropp JS, Viant MR, Woodruff DL, Yu P (2008) Improved identification of metabolites in complex mixtures using HSQC NMR spectroscopy. Anal Chim Acta 614:127–133
    • (2008) Anal Chim Acta , vol.614 , pp. 127-133
    • Xi, Y.1    de Ropp, J.S.2    Viant, M.R.3    Woodruff, D.L.4    Yu, P.5
  • 35
    • 84864479791 scopus 로고    scopus 로고
    • Metaboanalyst 2.0—a comprehensive server for metabolomic data analysis
    • COI: 1:CAS:528:DC%2BC3sXjtVCqu7w%3D, PID: 22553367
    • Xia J, Mandal R, Sinelnikov IV, Broadhurst D, Wishart DS (2012) Metaboanalyst 2.0—a comprehensive server for metabolomic data analysis. Nucleic Acids Res 40:W127–W133. doi:10.1093/nar/gks374
    • (2012) Nucleic Acids Res , vol.40 , pp. 127-133
    • Xia, J.1    Mandal, R.2    Sinelnikov, I.V.3    Broadhurst, D.4    Wishart, D.S.5
  • 36
    • 70349694349 scopus 로고    scopus 로고
    • Metabolic discrimination of Catharanthus roseus calli according to their relative locations using (1)H-NMR and principal component analysis
    • COI: 1:CAS:528:DC%2BD1MXht1GhurfF, PID: 19734668
    • Yang SO, Kim SH, Kim Y, Kim HS, Chun YJ, Choi HK (2009) Metabolic discrimination of Catharanthus roseus calli according to their relative locations using (1)H-NMR and principal component analysis. Biosci Biotechnol Biochem 73:2032–2036
    • (2009) Biosci Biotechnol Biochem , vol.73 , pp. 2032-2036
    • Yang, S.O.1    Kim, S.H.2    Kim, Y.3    Kim, H.S.4    Chun, Y.J.5    Choi, H.K.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.