-
1
-
-
84870724279
-
Systems analysis of plant functional, transcriptional, physical interaction, and metabolic networks
-
Bassel G.W., Gaudinier A., Brady S.M., Hennig L., Rhee S.Y., De Smet I. Systems analysis of plant functional, transcriptional, physical interaction, and metabolic networks. Plant Cell 2012, 24:3859-3875.
-
(2012)
Plant Cell
, vol.24
, pp. 3859-3875
-
-
Bassel, G.W.1
Gaudinier, A.2
Brady, S.M.3
Hennig, L.4
Rhee, S.Y.5
De Smet, I.6
-
2
-
-
72849144434
-
Sequencing technologies - the next generation
-
Metzker M.L. Sequencing technologies - the next generation. Nat Rev Genet 2010, 11:31-46.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 31-46
-
-
Metzker, M.L.1
-
3
-
-
84857975406
-
On the discordance of metabolomics with proteomics and transcriptomics: coping with increasing complexity in logic, chemistry and network interactions
-
Fernie A.R., Stitt M. On the discordance of metabolomics with proteomics and transcriptomics: coping with increasing complexity in logic, chemistry and network interactions. Plant Physiol 2012, 158:1139-1145.
-
(2012)
Plant Physiol
, vol.158
, pp. 1139-1145
-
-
Fernie, A.R.1
Stitt, M.2
-
4
-
-
33749120080
-
Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes
-
Gibon Y., Usadel B., Blaesing O., Kamlage B., Hoehne M., Trethewey R., Stitt M. Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes. Genome Biol 2006, 7:R76.
-
(2006)
Genome Biol
, vol.7
, pp. R76
-
-
Gibon, Y.1
Usadel, B.2
Blaesing, O.3
Kamlage, B.4
Hoehne, M.5
Trethewey, R.6
Stitt, M.7
-
5
-
-
84858439862
-
Insights into the regulation of protein abundance from proteomic and transcriptomic analyses
-
Vogel C., Marcotte E.M. Insights into the regulation of protein abundance from proteomic and transcriptomic analyses. Nat Rev Genet 2012, 13:227-232.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 227-232
-
-
Vogel, C.1
Marcotte, E.M.2
-
6
-
-
4444309760
-
Potential of metabolomics as a functional genomics tool
-
Bino R.J., Hall R.D., Fiehn O., Kopka J., Saito K., Draper J., Nikolau B.J., Mendes P., Roessner-Tunali U., Beale M.H. Potential of metabolomics as a functional genomics tool. Trends Plant Sci 2004, 9:418-425.
-
(2004)
Trends Plant Sci
, vol.9
, pp. 418-425
-
-
Bino, R.J.1
Hall, R.D.2
Fiehn, O.3
Kopka, J.4
Saito, K.5
Draper, J.6
Nikolau, B.J.7
Mendes, P.8
Roessner-Tunali, U.9
Beale, M.H.10
-
7
-
-
84867176464
-
Modulation of protein phosphorylation, N-glycosylation and Lys-acetylation in grape (Vitis vinifera) mesocarp and exocarp owing to Lobesia botrana infection
-
Melo-Braga M.N., Verano-Braga T., Leon I.R., Antonacci D., Nogueira F.C., Thelen J.J., Larsen M.R., Palmisano G. Modulation of protein phosphorylation, N-glycosylation and Lys-acetylation in grape (Vitis vinifera) mesocarp and exocarp owing to Lobesia botrana infection. Mol Cell Proteomics 2012, 11:945-956.
-
(2012)
Mol Cell Proteomics
, vol.11
, pp. 945-956
-
-
Melo-Braga, M.N.1
Verano-Braga, T.2
Leon, I.R.3
Antonacci, D.4
Nogueira, F.C.5
Thelen, J.J.6
Larsen, M.R.7
Palmisano, G.8
-
8
-
-
84872144570
-
A proteomic approach identifies many novel palmitoylated proteins in Arabidopsis
-
Hemsley P.A., Weimar T., Lilley K.S., Dupree P., Grierson C.S. A proteomic approach identifies many novel palmitoylated proteins in Arabidopsis. New Phytol 2013, 197:805-814.
-
(2013)
New Phytol
, vol.197
, pp. 805-814
-
-
Hemsley, P.A.1
Weimar, T.2
Lilley, K.S.3
Dupree, P.4
Grierson, C.S.5
-
9
-
-
84888038675
-
Proteomics analysis suggests broad functional changes in potato leaves triggered by phosphites and a complex indirect mode of action against Phytophthora infestans
-
Lim S., Borza T., Peters R.D., Coffin R.H., Al-Mughrabi K.I., Pinto D.M., Wang-Pruski G. Proteomics analysis suggests broad functional changes in potato leaves triggered by phosphites and a complex indirect mode of action against Phytophthora infestans. J Proteomics 2013, 93:207-223.
-
(2013)
J Proteomics
, vol.93
, pp. 207-223
-
-
Lim, S.1
Borza, T.2
Peters, R.D.3
Coffin, R.H.4
Al-Mughrabi, K.I.5
Pinto, D.M.6
Wang-Pruski, G.7
-
10
-
-
84880125012
-
Quantitative proteomics of tomato defense against Pseudomonas syringae infection
-
Parker J., Koh J., Yoo M.J., Zhu N., Feole M., Yi S., Chen S. Quantitative proteomics of tomato defense against Pseudomonas syringae infection. Proteomics 2013, 13:1934-1946.
-
(2013)
Proteomics
, vol.13
, pp. 1934-1946
-
-
Parker, J.1
Koh, J.2
Yoo, M.J.3
Zhu, N.4
Feole, M.5
Yi, S.6
Chen, S.7
-
11
-
-
84868029990
-
Proteomic analysis of grapevine resistance induced by Trichoderma harzianum T39 reveals specific defence pathways activated against downy mildew
-
Palmieri M.C., Perazzolli M., Matafora V., Moretto M., Bachi A., Pertot I. Proteomic analysis of grapevine resistance induced by Trichoderma harzianum T39 reveals specific defence pathways activated against downy mildew. J Exp Bot 2012, 63:6237-6251.
-
(2012)
J Exp Bot
, vol.63
, pp. 6237-6251
-
-
Palmieri, M.C.1
Perazzolli, M.2
Matafora, V.3
Moretto, M.4
Bachi, A.5
Pertot, I.6
-
12
-
-
59149088519
-
Effector proteins of the bacterial pathogen Pseudomonas syringae alter the extracellular proteome of the host plant, Arabidopsis thaliana
-
Kaffarnik F.A., Jones A.M., Rathjen J.P., Peck S.C. Effector proteins of the bacterial pathogen Pseudomonas syringae alter the extracellular proteome of the host plant, Arabidopsis thaliana. Mol Cell Proteomics 2009, 8:145-156.
-
(2009)
Mol Cell Proteomics
, vol.8
, pp. 145-156
-
-
Kaffarnik, F.A.1
Jones, A.M.2
Rathjen, J.P.3
Peck, S.C.4
-
13
-
-
84928207140
-
-
Springer Science and Business Media, Heidelberg
-
Jorrin-Novo J.V., Komatsu S., Weckwerth W., Wienkoop S. Plant Proteomics: Methods and Protocols 2014, 1072. Springer Science and Business Media, Heidelberg.
-
(2014)
Plant Proteomics: Methods and Protocols
, vol.1072
-
-
Jorrin-Novo, J.V.1
Komatsu, S.2
Weckwerth, W.3
Wienkoop, S.4
-
14
-
-
2442430450
-
Bifunctional and moonlighting enzymes: lighting the way to regulatory control
-
Moore B.D. Bifunctional and moonlighting enzymes: lighting the way to regulatory control. Trends Plant Sci 2004, 9:221-228.
-
(2004)
Trends Plant Sci
, vol.9
, pp. 221-228
-
-
Moore, B.D.1
-
15
-
-
84925859414
-
PlantSecKB: the plant secretome and subcellular proteome knowledgebase
-
Lum G., Meinken J., Orr J., Frazier S., Min X. PlantSecKB: the plant secretome and subcellular proteome knowledgebase. Comput Mol Biol 2014, 4:1-17.
-
(2014)
Comput Mol Biol
, vol.4
, pp. 1-17
-
-
Lum, G.1
Meinken, J.2
Orr, J.3
Frazier, S.4
Min, X.5
-
16
-
-
77957286626
-
Root secretion of defense-related proteins is development-dependent and correlated with flowering time
-
De-la-Pena C., Badri D.V., Lei Z., Watson B.S., Brandao M.M., Silva-Filho M.C., Sumner L.W., Vivanco J.M. Root secretion of defense-related proteins is development-dependent and correlated with flowering time. J Biol Chem 2010, 285:30654-30665.
-
(2010)
J Biol Chem
, vol.285
, pp. 30654-30665
-
-
De-la-Pena, C.1
Badri, D.V.2
Lei, Z.3
Watson, B.S.4
Brandao, M.M.5
Silva-Filho, M.C.6
Sumner, L.W.7
Vivanco, J.M.8
-
17
-
-
78649383919
-
Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar
-
Pechanova O., Hsu C.-Y., Adams J., Pechan T., Vandervelde L., Drnevich J., Jawdy S., Adeli A., Suttle J., Lawrence A., et al. Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar. BMC Genomics 2010, 11:674.
-
(2010)
BMC Genomics
, vol.11
, pp. 674
-
-
Pechanova, O.1
Hsu, C.-Y.2
Adams, J.3
Pechan, T.4
Vandervelde, L.5
Drnevich, J.6
Jawdy, S.7
Adeli, A.8
Suttle, J.9
Lawrence, A.10
-
18
-
-
84870707963
-
In-depth insight into in vivo apoplastic secretome of rice-Magnaporthe oryzae interaction
-
Kim S.G., Wang Y., Lee K.H., Park Z.Y., Park J., Wu J., Kwon S.J., Lee Y.H., Agrawal G.K., Rakwal R., et al. In-depth insight into in vivo apoplastic secretome of rice-Magnaporthe oryzae interaction. J Proteomics 2013, 78:58-71.
-
(2013)
J Proteomics
, vol.78
, pp. 58-71
-
-
Kim, S.G.1
Wang, Y.2
Lee, K.H.3
Park, Z.Y.4
Park, J.5
Wu, J.6
Kwon, S.J.7
Lee, Y.H.8
Agrawal, G.K.9
Rakwal, R.10
-
19
-
-
84907879711
-
Proteomics of rice and Cochliobolus miyabeanus fungal interaction: insight into proteins at intracellular and extracellular spaces
-
Kim J.Y., Wu J., Kwon S.J., Oh H., Lee S.E., Kim S.G., Wang Y., Agrawal G.K., Rakwal R., Kang K.Y., et al. Proteomics of rice and Cochliobolus miyabeanus fungal interaction: insight into proteins at intracellular and extracellular spaces. Proteomics 2014, 14:2307-2318.
-
(2014)
Proteomics
, vol.14
, pp. 2307-2318
-
-
Kim, J.Y.1
Wu, J.2
Kwon, S.J.3
Oh, H.4
Lee, S.E.5
Kim, S.G.6
Wang, Y.7
Agrawal, G.K.8
Rakwal, R.9
Kang, K.Y.10
-
20
-
-
84866849347
-
Unconventional protein secretion
-
Ding Y., Wang J., Stierhof Y.D., Robinson D.G., Jiang L. Unconventional protein secretion. Trends Plant Sci 2012, 17:606-615.
-
(2012)
Trends Plant Sci
, vol.17
, pp. 606-615
-
-
Ding, Y.1
Wang, J.2
Stierhof, Y.D.3
Robinson, D.G.4
Jiang, L.5
-
21
-
-
79551653860
-
EXPO, an exocyst-positive organelle distinct from multivesicular endosomes and autophagosomes, mediates cytosol to cell wall exocytosis in Arabidopsis and tobacco cells
-
Wang J., Ding Y., Hillmer S., Miao Y., Lo S.W., Wang X., Robinson D.G., Jiang L. EXPO, an exocyst-positive organelle distinct from multivesicular endosomes and autophagosomes, mediates cytosol to cell wall exocytosis in Arabidopsis and tobacco cells. Plant Cell 2010, 22:4009-4030.
-
(2010)
Plant Cell
, vol.22
, pp. 4009-4030
-
-
Wang, J.1
Ding, Y.2
Hillmer, S.3
Miao, Y.4
Lo, S.W.5
Wang, X.6
Robinson, D.G.7
Jiang, L.8
-
22
-
-
84888429837
-
Exocyst complexes multiple functions in plant cells secretory pathways
-
Zarsky V., Kulich I., Fendrych M., Pecenkova T. Exocyst complexes multiple functions in plant cells secretory pathways. Curr Opin Plant Biol 2013, 16:726-733.
-
(2013)
Curr Opin Plant Biol
, vol.16
, pp. 726-733
-
-
Zarsky, V.1
Kulich, I.2
Fendrych, M.3
Pecenkova, T.4
-
23
-
-
79952825716
-
The role for the exocyst complex subunits Exo70B2 and Exo70H1 in the plant-pathogen interaction
-
Pecenkova T., Hala M., Kulich I., Kocourkova D., Drdova E., Fendrych M., Toupalova H., Zarsky V. The role for the exocyst complex subunits Exo70B2 and Exo70H1 in the plant-pathogen interaction. J Exp Bot 2011, 62:2107-2116.
-
(2011)
J Exp Bot
, vol.62
, pp. 2107-2116
-
-
Pecenkova, T.1
Hala, M.2
Kulich, I.3
Kocourkova, D.4
Drdova, E.5
Fendrych, M.6
Toupalova, H.7
Zarsky, V.8
-
24
-
-
84902717183
-
Quantitative proteomics and transcriptomics of potato in response to Phytophthora infestans in compatible and incompatible interactions
-
Ali A., Alexandersson E., Sandin M., Resjo S., Lenman M., Hedley P., Levander F., Andreasson E. Quantitative proteomics and transcriptomics of potato in response to Phytophthora infestans in compatible and incompatible interactions. BMC Genomics 2014, 15:497.
-
(2014)
BMC Genomics
, vol.15
, pp. 497
-
-
Ali, A.1
Alexandersson, E.2
Sandin, M.3
Resjo, S.4
Lenman, M.5
Hedley, P.6
Levander, F.7
Andreasson, E.8
-
25
-
-
78650532907
-
Defence reactions in the apoplastic proteome of oilseed rape (Brassica napus var. napus) attenuate Verticillium longisporum growth but not disease symptoms
-
Floerl S., Druebert C., Majcherczyk A., Karlovsky P., Kues U., Polle A. Defence reactions in the apoplastic proteome of oilseed rape (Brassica napus var. napus) attenuate Verticillium longisporum growth but not disease symptoms. BMC Plant Biol 2008, 8:129.
-
(2008)
BMC Plant Biol
, vol.8
, pp. 129
-
-
Floerl, S.1
Druebert, C.2
Majcherczyk, A.3
Karlovsky, P.4
Kues, U.5
Polle, A.6
-
26
-
-
84979585392
-
Uncovering plant-pathogen crosstalk through apoplastic proteomic studies
-
Delaunois B., Jeandet P., Clement C., Baillieul F., Dorey S., Cordelier S. Uncovering plant-pathogen crosstalk through apoplastic proteomic studies. Front Plant Sci 2014, 5.
-
(2014)
Front Plant Sci
, vol.5
-
-
Delaunois, B.1
Jeandet, P.2
Clement, C.3
Baillieul, F.4
Dorey, S.5
Cordelier, S.6
-
27
-
-
79952187532
-
Proteomic analysis of secreted proteins from aseptically grown rice
-
Shinano T., Komatsu S., Yoshimura T., Tokutake S., Kong F.J., Watanabe T., Wasaki J., Osaki M. Proteomic analysis of secreted proteins from aseptically grown rice. Phytochemistry 2011, 72:312-320.
-
(2011)
Phytochemistry
, vol.72
, pp. 312-320
-
-
Shinano, T.1
Komatsu, S.2
Yoshimura, T.3
Tokutake, S.4
Kong, F.J.5
Watanabe, T.6
Wasaki, J.7
Osaki, M.8
-
28
-
-
84857909421
-
Use of intercellular washing fluid to investigate the secreted proteome of the rice-Magnaporthe interaction
-
Shenton M.R., Berberich T., Kamo M., Yamashita T., Taira H., Terauchi R. Use of intercellular washing fluid to investigate the secreted proteome of the rice-Magnaporthe interaction. J Plant Res 2012, 125:311-316.
-
(2012)
J Plant Res
, vol.125
, pp. 311-316
-
-
Shenton, M.R.1
Berberich, T.2
Kamo, M.3
Yamashita, T.4
Taira, H.5
Terauchi, R.6
-
29
-
-
79960957705
-
Independently evolved virulence effectors converge onto hubs in a plant immune system network
-
Mukhtar M.S., Carvunis A.R., Dreze M., Epple P., Steinbrenner J., Moore J., Tasan M., Galli M., Hao T., Nishimura M.T., et al. Independently evolved virulence effectors converge onto hubs in a plant immune system network. Science 2011, 333:596-601.
-
(2011)
Science
, vol.333
, pp. 596-601
-
-
Mukhtar, M.S.1
Carvunis, A.R.2
Dreze, M.3
Epple, P.4
Steinbrenner, J.5
Moore, J.6
Tasan, M.7
Galli, M.8
Hao, T.9
Nishimura, M.T.10
-
30
-
-
77956431323
-
Biotic stress globally downregulates photosynthesis genes
-
Bilgin D.D., Zavala J.A., Zhu J., Clough S.J., Ort D.R., DeLucia E.H. Biotic stress globally downregulates photosynthesis genes. Plant Cell Environ 2010, 33:1597-1613.
-
(2010)
Plant Cell Environ
, vol.33
, pp. 1597-1613
-
-
Bilgin, D.D.1
Zavala, J.A.2
Zhu, J.3
Clough, S.J.4
Ort, D.R.5
DeLucia, E.H.6
-
31
-
-
79953211561
-
Proteomic analysis of extracellular ATP-regulated proteins identifies ATP synthase ß-subunit as a novel plant cell death regulator
-
M110 003905
-
Chivasa S., Tome D.F., Hamilton J.M., Slabas A.R. Proteomic analysis of extracellular ATP-regulated proteins identifies ATP synthase ß-subunit as a novel plant cell death regulator. Mol Cell Proteomics 2011, 10. M110 003905.
-
(2011)
Mol Cell Proteomics
, vol.10
-
-
Chivasa, S.1
Tome, D.F.2
Hamilton, J.M.3
Slabas, A.R.4
-
32
-
-
70350485008
-
Extracellular ATP is a regulator of pathogen defence in plants
-
Chivasa S., Murphy A.M., Hamilton J.M., Lindsey K., Carr J.P., Slabas A.R. Extracellular ATP is a regulator of pathogen defence in plants. Plant J 2009, 60:436-448.
-
(2009)
Plant J
, vol.60
, pp. 436-448
-
-
Chivasa, S.1
Murphy, A.M.2
Hamilton, J.M.3
Lindsey, K.4
Carr, J.P.5
Slabas, A.R.6
-
33
-
-
84887555324
-
Fluorescent protein tagging as a tool to define the subcellular distribution of proteins in plants
-
Tanz S.K., Castleden I., Small I.D., Millar A.H. Fluorescent protein tagging as a tool to define the subcellular distribution of proteins in plants. Front Plant Sci 2013, 4:214.
-
(2013)
Front Plant Sci
, vol.4
, pp. 214
-
-
Tanz, S.K.1
Castleden, I.2
Small, I.D.3
Millar, A.H.4
-
34
-
-
84870625577
-
Proteomics-based identification of low-abundance signaling and regulatory protein complexes in native plant tissues
-
Smaczniak C., Li N., Boeren S., America T., van Dongen W., Goerdayal S.S., de Vries S., Angenent G.C., Kaufmann K. Proteomics-based identification of low-abundance signaling and regulatory protein complexes in native plant tissues. Nat Protoc 2012, 7:2144-2158.
-
(2012)
Nat Protoc
, vol.7
, pp. 2144-2158
-
-
Smaczniak, C.1
Li, N.2
Boeren, S.3
America, T.4
van Dongen, W.5
Goerdayal, S.S.6
de Vries, S.7
Angenent, G.C.8
Kaufmann, K.9
-
35
-
-
84870693336
-
Single-cell-type proteomics: toward a holistic understanding of plant function
-
Dai S., Chen S. Single-cell-type proteomics: toward a holistic understanding of plant function. Mol Cell Proteomics 2012, 11:1622-1630.
-
(2012)
Mol Cell Proteomics
, vol.11
, pp. 1622-1630
-
-
Dai, S.1
Chen, S.2
-
36
-
-
84979643007
-
Evaluating plant immunity using mass spectrometry-based metabolomics workflows
-
Heuberger A.L., Robison F.M., Lyons S.M., Broeckling C.D., Prenni J.E. Evaluating plant immunity using mass spectrometry-based metabolomics workflows. Front Plant Sci 2014, 5:291.
-
(2014)
Front Plant Sci
, vol.5
, pp. 291
-
-
Heuberger, A.L.1
Robison, F.M.2
Lyons, S.M.3
Broeckling, C.D.4
Prenni, J.E.5
-
37
-
-
0036007687
-
Metabolomics - the link between genotypes and phenotypes
-
Fiehn O. Metabolomics - the link between genotypes and phenotypes. Plant Mol Biol 2002, 48:155-171.
-
(2002)
Plant Mol Biol
, vol.48
, pp. 155-171
-
-
Fiehn, O.1
-
38
-
-
0035984047
-
Plant metabolomics: the missing link in functional genomics strategies
-
Hall R., Beale M., Fiehn O., Hardy N., Sumner L., Bino R. Plant metabolomics: the missing link in functional genomics strategies. Plant Cell 2002, 14:1437-1440.
-
(2002)
Plant Cell
, vol.14
, pp. 1437-1440
-
-
Hall, R.1
Beale, M.2
Fiehn, O.3
Hardy, N.4
Sumner, L.5
Bino, R.6
-
39
-
-
84907095098
-
Metabolite identification: are you sure? And how do your peers gauge your confidence?
-
Creek D., Dunn W., Fiehn O., Griffin J., Hall R., Lei Z., Mistrik R., Neumann S., Schymanski E., Sumner L., et al. Metabolite identification: are you sure? And how do your peers gauge your confidence?. Metabolomics 2014, 10:350-353.
-
(2014)
Metabolomics
, vol.10
, pp. 350-353
-
-
Creek, D.1
Dunn, W.2
Fiehn, O.3
Griffin, J.4
Hall, R.5
Lei, Z.6
Mistrik, R.7
Neumann, S.8
Schymanski, E.9
Sumner, L.10
-
40
-
-
0034959944
-
Combining genomics, metabolome analysis, and biochemical modelling to understand metabolic networks
-
Fiehn O. Combining genomics, metabolome analysis, and biochemical modelling to understand metabolic networks. Comp Funct Genom 2001, 2:155-168.
-
(2001)
Comp Funct Genom
, vol.2
, pp. 155-168
-
-
Fiehn, O.1
-
41
-
-
84939884526
-
MarVis-Pathway: integrative and exploratory pathway analysis of non-targeted metabolomics data
-
Kaever A., Landesfeind M., Feussner K., Mosblech A., Heilmann I., Morgenstern B., Feussner I., Meinicke P. MarVis-Pathway: integrative and exploratory pathway analysis of non-targeted metabolomics data. Metabolomics 2015, 11:764-777.
-
(2015)
Metabolomics
, vol.11
, pp. 764-777
-
-
Kaever, A.1
Landesfeind, M.2
Feussner, K.3
Mosblech, A.4
Heilmann, I.5
Morgenstern, B.6
Feussner, I.7
Meinicke, P.8
-
42
-
-
78650338141
-
Host plant secondary metabolite profiling shows a complex, strain-dependent response of maize to plant growth-promoting rhizobacteria of the genus Azospirillum
-
Walker V., Bertrand C., Bellvert F., Moënne-Loccoz Y., Bally R., Comte G. Host plant secondary metabolite profiling shows a complex, strain-dependent response of maize to plant growth-promoting rhizobacteria of the genus Azospirillum. New Phytol 2011, 189:494-506.
-
(2011)
New Phytol
, vol.189
, pp. 494-506
-
-
Walker, V.1
Bertrand, C.2
Bellvert, F.3
Moënne-Loccoz, Y.4
Bally, R.5
Comte, G.6
-
43
-
-
80055018408
-
Metabolic priming by a secreted fungal effector
-
Djamei A., Schipper K., Rabe F., Ghosh A., Vincon V., Kahnt J., Osorio S., Tohge T., Fernie A.R., Feussner I., et al. Metabolic priming by a secreted fungal effector. Nature 2011, 478:395-398.
-
(2011)
Nature
, vol.478
, pp. 395-398
-
-
Djamei, A.1
Schipper, K.2
Rabe, F.3
Ghosh, A.4
Vincon, V.5
Kahnt, J.6
Osorio, S.7
Tohge, T.8
Fernie, A.R.9
Feussner, I.10
-
44
-
-
84873025578
-
Pipecolic acid, an endogenous mediator of defense amplification and priming, is a critical regulator of inducible plant immunity
-
Navarova H., Bernsdorff F., Döring A.-C., Zeier J. Pipecolic acid, an endogenous mediator of defense amplification and priming, is a critical regulator of inducible plant immunity. Plant Cell 2012, 24:5123-5141.
-
(2012)
Plant Cell
, vol.24
, pp. 5123-5141
-
-
Navarova, H.1
Bernsdorff, F.2
Döring, A.-C.3
Zeier, J.4
-
45
-
-
79955467963
-
Glycerol-3-phosphate is a critical mobile inducer of systemic immunity in plants
-
Chanda B., Xia Y., Mandal M.K., Yu K., Sekine K., Gao Q-m, Selote D., Hu Y., Stromberg A., Navarre D., et al. Glycerol-3-phosphate is a critical mobile inducer of systemic immunity in plants. Nat Genet 2011, 43:421-427.
-
(2011)
Nat Genet
, vol.43
, pp. 421-427
-
-
Chanda, B.1
Xia, Y.2
Mandal, M.K.3
Yu, K.4
Sekine, K.5
Gao, Q.-M.6
Selote, D.7
Hu, Y.8
Stromberg, A.9
Navarre, D.10
-
46
-
-
84905385867
-
1. Metabolomics deciphers the host resistance mechanisms in wheat cultivar Sumai-3, against trichothecene producing and non-producing isolates of Fusarium graminearum
-
Gunnaiah R., Kushalappa AC: 1. Metabolomics deciphers the host resistance mechanisms in wheat cultivar Sumai-3, against trichothecene producing and non-producing isolates of Fusarium graminearum. Plant Physiol Biochem 2014, 83:40-50.
-
(2014)
Plant Physiol Biochem
, vol.83
, pp. 40-50
-
-
Gunnaiah, R.1
Kushalappa, A.C.2
-
47
-
-
84876168417
-
Suppression of plant defense responses by extracellular metabolites from Pseudomonas syringae pv. tabaci in Nicotiana benthamiana
-
Lee S., Yang D.S., Uppalapati S.R., Sumner L., Mysore K. Suppression of plant defense responses by extracellular metabolites from Pseudomonas syringae pv. tabaci in Nicotiana benthamiana. BMC Plant Biol 2013, 13:65.
-
(2013)
BMC Plant Biol
, vol.13
, pp. 65
-
-
Lee, S.1
Yang, D.S.2
Uppalapati, S.R.3
Sumner, L.4
Mysore, K.5
-
48
-
-
84908605891
-
Different metabolic and genetic responses in citrus may explain relative susceptibility against Tetranychus urticae
-
Agut B., Gamir J., Jacas J.A., Hurtado M., Flors V. Different metabolic and genetic responses in citrus may explain relative susceptibility against Tetranychus urticae. Pest Manage Sci 2014, 70:1728-1741.
-
(2014)
Pest Manage Sci
, vol.70
, pp. 1728-1741
-
-
Agut, B.1
Gamir, J.2
Jacas, J.A.3
Hurtado, M.4
Flors, V.5
-
49
-
-
84873085755
-
Metabolomics reveals herbivore-induced metabolites of resistance and susceptibility in maize leaves and roots
-
Marti G., Erb M., Boccard J., Glauser G., Doyen G.R., Villard N., Robert C.A.M., Turlings T.C.J., Rudaz S., Wolfender J.-L. Metabolomics reveals herbivore-induced metabolites of resistance and susceptibility in maize leaves and roots. Plant Cell Environ 2012, 36:621-639.
-
(2012)
Plant Cell Environ
, vol.36
, pp. 621-639
-
-
Marti, G.1
Erb, M.2
Boccard, J.3
Glauser, G.4
Doyen, G.R.5
Villard, N.6
Robert, C.A.M.7
Turlings, T.C.J.8
Rudaz, S.9
Wolfender, J.-L.10
-
50
-
-
84898027297
-
Soluble phenylpropanoids are involved in the defense response of Arabidopsis against Verticillium longisporum
-
König S., Feussner K., Kaever A., Landesfeind M., Thurow C., Karlovsky P., Gatz C., Polle A., Feussner I. Soluble phenylpropanoids are involved in the defense response of Arabidopsis against Verticillium longisporum. New Phytol 2014, 202:823-837.
-
(2014)
New Phytol
, vol.202
, pp. 823-837
-
-
König, S.1
Feussner, K.2
Kaever, A.3
Landesfeind, M.4
Thurow, C.5
Karlovsky, P.6
Gatz, C.7
Polle, A.8
Feussner, I.9
-
51
-
-
84898766977
-
A secreted Ustilago maydis effector promotes virulence by targeting anthocyanin biosynthesis in maize
-
Tanaka S., Brefort T., Neidig N., Djamei A., Kahnt J., Vermerris W., Koenig S., Feussner K., Feussner I., Kahmann R. A secreted Ustilago maydis effector promotes virulence by targeting anthocyanin biosynthesis in maize. eLife 2014, 3:e01355.
-
(2014)
eLife
, vol.3
, pp. e01355
-
-
Tanaka, S.1
Brefort, T.2
Neidig, N.3
Djamei, A.4
Kahnt, J.5
Vermerris, W.6
Koenig, S.7
Feussner, K.8
Feussner, I.9
Kahmann, R.10
-
52
-
-
84898483484
-
Targeting novel chemical and constitutive primed metabolites against Plectosphaerella cucumerina
-
Gamir J., Pastor V., Kaever A., Cerezo M., Flors V. Targeting novel chemical and constitutive primed metabolites against Plectosphaerella cucumerina. Plant J 2014, 78:227-240.
-
(2014)
Plant J
, vol.78
, pp. 227-240
-
-
Gamir, J.1
Pastor, V.2
Kaever, A.3
Cerezo, M.4
Flors, V.5
-
53
-
-
84901381734
-
High specificity in plant leaf metabolic responses to arbuscular mycorrhiza
-
Schweiger R., Baier M.C., Persicke M., Müller C. High specificity in plant leaf metabolic responses to arbuscular mycorrhiza. Nat Commun 2014, 5.
-
(2014)
Nat Commun
, vol.5
-
-
Schweiger, R.1
Baier, M.C.2
Persicke, M.3
Müller, C.4
-
54
-
-
84857422982
-
Verticillium longisporum infection affects the leaf apoplastic proteome, metabolome, and cell wall properties in Arabidopsis thaliana
-
Floerl S., Majcherczyk A., Possienke M., Feussner K., Tappe H., Gatz C., Feussner I., Kües U., Polle A. Verticillium longisporum infection affects the leaf apoplastic proteome, metabolome, and cell wall properties in Arabidopsis thaliana. PLoS ONE 2012, 7:e31435.
-
(2012)
PLoS ONE
, vol.7
, pp. e31435
-
-
Floerl, S.1
Majcherczyk, A.2
Possienke, M.3
Feussner, K.4
Tappe, H.5
Gatz, C.6
Feussner, I.7
Kües, U.8
Polle, A.9
-
55
-
-
84876297367
-
Induced resistance in maize is based on organ-specific defence responses
-
Balmer D., de Papajewski D.V., Planchamp C., Glauser G., Mauch-Mani B. Induced resistance in maize is based on organ-specific defence responses. Plant J 2013, 74:213-225.
-
(2013)
Plant J
, vol.74
, pp. 213-225
-
-
Balmer, D.1
de Papajewski, D.V.2
Planchamp, C.3
Glauser, G.4
Mauch-Mani, B.5
-
56
-
-
84855243942
-
Transcript and metabolite analysis of the Trichoderma-induced systemic resistance response to Pseudomonas syringae in Arabidopsis thaliana
-
Brotman Y., Lisec J., Meret M., Chet I., Willmitzer L., Viterbo A. Transcript and metabolite analysis of the Trichoderma-induced systemic resistance response to Pseudomonas syringae in Arabidopsis thaliana. Microbiol 2012, 158:139-146.
-
(2012)
Microbiol
, vol.158
, pp. 139-146
-
-
Brotman, Y.1
Lisec, J.2
Meret, M.3
Chet, I.4
Willmitzer, L.5
Viterbo, A.6
-
57
-
-
84923674139
-
Transcriptome and metabolite profiling of the infection cycle of Zymoseptoria tritici on wheat reveals a biphasic interaction with plant immunity involving differential pathogen chromosomal contributions and a variation on the hemibiotrophic lifestyle definition
-
Rudd J.J., Kanyuka K., Hassani-Pak K., Derbyshire M., Andongabo A., Devonshire J., Lysenko A., Saqi M., Desai N.M., Powers S.J., et al. Transcriptome and metabolite profiling of the infection cycle of Zymoseptoria tritici on wheat reveals a biphasic interaction with plant immunity involving differential pathogen chromosomal contributions and a variation on the hemibiotrophic lifestyle definition. Plant Physiol 2015, 167:1158-1185.
-
(2015)
Plant Physiol
, vol.167
, pp. 1158-1185
-
-
Rudd, J.J.1
Kanyuka, K.2
Hassani-Pak, K.3
Derbyshire, M.4
Andongabo, A.5
Devonshire, J.6
Lysenko, A.7
Saqi, M.8
Desai, N.M.9
Powers, S.J.10
-
58
-
-
84863743165
-
Integrated metabolo-proteomic approach to decipher the mechanisms by which wheat QTL (Fhb1) contributes to resistance against Fusarium graminearum
-
Gunnaiah R., Kushalappa A.C., Duggavathi R., Fox S., Somers D.J. Integrated metabolo-proteomic approach to decipher the mechanisms by which wheat QTL (Fhb1) contributes to resistance against Fusarium graminearum. PLoS ONE 2012, 7:e40695.
-
(2012)
PLoS ONE
, vol.7
, pp. e40695
-
-
Gunnaiah, R.1
Kushalappa, A.C.2
Duggavathi, R.3
Fox, S.4
Somers, D.J.5
-
59
-
-
77954455882
-
Metabolomic and transcriptomic analysis of the rice response to the bacterial blight pathogen Xanthomonas oryzae pv. oryzae
-
Sana T., Fischer S., Wohlgemuth G., Katrekar A., Jung K-h, Ronald P., Fiehn O. Metabolomic and transcriptomic analysis of the rice response to the bacterial blight pathogen Xanthomonas oryzae pv. oryzae. Metabolomics 2010, 6:451-465.
-
(2010)
Metabolomics
, vol.6
, pp. 451-465
-
-
Sana, T.1
Fischer, S.2
Wohlgemuth, G.3
Katrekar, A.4
Jung, K.-H.5
Ronald, P.6
Fiehn, O.7
-
60
-
-
84898747457
-
Combining metabolomics and gene expression analysis reveals that propionyl- and butyryl-carnitines are involved in late stages of arbuscular mycorrhizal symbiosis
-
Laparre J., Malbreil M., Letisse F., Portais J.C., Roux C., Bécard G., Puech-Pagès V. Combining metabolomics and gene expression analysis reveals that propionyl- and butyryl-carnitines are involved in late stages of arbuscular mycorrhizal symbiosis. Mol Plant 2014, 7:554-566.
-
(2014)
Mol Plant
, vol.7
, pp. 554-566
-
-
Laparre, J.1
Malbreil, M.2
Letisse, F.3
Portais, J.C.4
Roux, C.5
Bécard, G.6
Puech-Pagès, V.7
-
61
-
-
47949129868
-
Metabolite-based clustering and visualization of mass spectrometry data using one-dimensional self-organizing maps
-
Meinicke P., Lingner T., Kaever A., Feussner K., Göbel C., Feussner I., Karlovsky P., Morgenstern B. Metabolite-based clustering and visualization of mass spectrometry data using one-dimensional self-organizing maps. Algorithms Mol Biol 2008, 3:9.
-
(2008)
Algorithms Mol Biol
, vol.3
, pp. 9
-
-
Meinicke, P.1
Lingner, T.2
Kaever, A.3
Feussner, K.4
Göbel, C.5
Feussner, I.6
Karlovsky, P.7
Morgenstern, B.8
-
62
-
-
84878435254
-
Deciphering herbivory-induced gene-to-metabolite dynamics in Nicotiana attenuata tissues using a multifactorial approach
-
Gulati J., Kim S.-G., Baldwin I.T., Gaquerel E. Deciphering herbivory-induced gene-to-metabolite dynamics in Nicotiana attenuata tissues using a multifactorial approach. Plant Physiol 2013, 162:1042-1059.
-
(2013)
Plant Physiol
, vol.162
, pp. 1042-1059
-
-
Gulati, J.1
Kim, S.-G.2
Baldwin, I.T.3
Gaquerel, E.4
-
63
-
-
84924336459
-
Predicting the functional repertoire of an organism from unassembled RNAseq data
-
Landesfeind M., Meinicke P. Predicting the functional repertoire of an organism from unassembled RNAseq data. BMC Genomics 2014, 15:1003.
-
(2014)
BMC Genomics
, vol.15
, pp. 1003
-
-
Landesfeind, M.1
Meinicke, P.2
-
64
-
-
84897943328
-
Integrative study of Arabidopsis thaliana metabolomic and transcriptomic data with the interactive MarVis-Graph software
-
Landesfeind M., Kaever A., Feussner K., Thurow C., Gatz C., Feussner I., Meinicke P. Integrative study of Arabidopsis thaliana metabolomic and transcriptomic data with the interactive MarVis-Graph software. PeerJ 2014, 2:e239.
-
(2014)
PeerJ
, vol.2
, pp. e239
-
-
Landesfeind, M.1
Kaever, A.2
Feussner, K.3
Thurow, C.4
Gatz, C.5
Feussner, I.6
Meinicke, P.7
-
65
-
-
84893842377
-
Lipidomics in situ: insights into plant lipid metabolism from high resolution spatial maps of metabolites
-
Horn P.J., Chapman K.D. Lipidomics in situ: insights into plant lipid metabolism from high resolution spatial maps of metabolites. Prog Lipid Res 2014, 54:32-52.
-
(2014)
Prog Lipid Res
, vol.54
, pp. 32-52
-
-
Horn, P.J.1
Chapman, K.D.2
-
66
-
-
84855794798
-
Spatially resolved analysis of small molecules by matrix-assisted laser desorption/ionization mass spectrometric imaging (MALDI-MSI)
-
Peukert M., Matros A., Lattanzio G., Kaspar S., Abadía J., Mock H.-P. Spatially resolved analysis of small molecules by matrix-assisted laser desorption/ionization mass spectrometric imaging (MALDI-MSI). New Phytol 2012, 193:806-815.
-
(2012)
New Phytol
, vol.193
, pp. 806-815
-
-
Peukert, M.1
Matros, A.2
Lattanzio, G.3
Kaspar, S.4
Abadía, J.5
Mock, H.-P.6
|