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Volumn 468, Issue , 2014, Pages 556-564

Geographic variation in the eukaryotic virome of human diarrhea

Author keywords

Diarrhea; Metagenomics; Virome

Indexed keywords

ADENOVIRIDAE; ARTICLE; ASTROVIRIDAE; AUSTRALIA; CHILD; CONTROLLED STUDY; CORONAVIRIDAE; DIARRHEA; ENTERIC VIRUS; ENTEROVIRUS; EUKARYOTIC VIRUS; FECES ANALYSIS; FEMALE; GENE SEQUENCE; GEOGRAPHIC ORIGIN; GEOGRAPHICAL VARIATION (SPECIES); HUMAN; MALE; METAGENOMICS; NONHUMAN; NOROVIRUS; NUCLEOTIDE SEQUENCE; PICORNAVIRIDAE; PLANT VIRUS; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; ROTAVIRUS; SEX DIFFERENCE; SPECIES COMPARISON; VIRUS; VIRUS DETECTION; VIRUS IDENTIFICATION; CLASSIFICATION; FECES; GAMBIA; GENETICS; INFANT; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; PRESCHOOL CHILD; RNA VIRUS; UNITED STATES; VIROLOGY; VIRUS DISEASES; VIRUS GENOME;

EID: 84930637082     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2014.09.012     Document Type: Article
Times cited : (66)

References (53)
  • 4
    • 0037808178 scopus 로고    scopus 로고
    • Chronic T cell-mediated enteropathy in rural west African children: relationship with nutritional status and small bowel function
    • Campbell D.I., Murch S.H., Elia M., Sullivan P.B., Sanyang M.S., Jobarteh B., Lunn P.G. Chronic T cell-mediated enteropathy in rural west African children: relationship with nutritional status and small bowel function. Pediatr. Res. 2003, 54:306-311.
    • (2003) Pediatr. Res. , vol.54 , pp. 306-311
    • Campbell, D.I.1    Murch, S.H.2    Elia, M.3    Sullivan, P.B.4    Sanyang, M.S.5    Jobarteh, B.6    Lunn, P.G.7
  • 9
  • 10
    • 35348857386 scopus 로고    scopus 로고
    • Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
    • Frank D.N., Amand A.L., Feldman R.A., Boedeker E.C., Harpaz N., Pace N.R. Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proc. Natl. Acad. Sci. USA 2007, 104:13780-13785.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 13780-13785
    • Frank, D.N.1    Amand, A.L.2    Feldman, R.A.3    Boedeker, E.C.4    Harpaz, N.5    Pace, N.R.6
  • 11
    • 67649438774 scopus 로고    scopus 로고
    • Indigenous health. Part 1: determinants and disease patterns
    • Gracey M., King M. Indigenous health. Part 1: determinants and disease patterns. Lancet 2009, 374:65-75.
    • (2009) Lancet , vol.374 , pp. 65-75
    • Gracey, M.1    King, M.2
  • 13
    • 3242691087 scopus 로고
    • An endemiological study of enteric virus infections: poliomyelitis, coxsackie, and orphan (ECHO) viruses isolated from normal children in two socioeconomic groups
    • Honig E.I., Melnick J.L., Isacson P., Parr R., Myers I.L., Walton M. An endemiological study of enteric virus infections: poliomyelitis, coxsackie, and orphan (ECHO) viruses isolated from normal children in two socioeconomic groups. J. Exp. Med. 1956, 103:247-262.
    • (1956) J. Exp. Med. , vol.103 , pp. 247-262
    • Honig, E.I.1    Melnick, J.L.2    Isacson, P.3    Parr, R.4    Myers, I.L.5    Walton, M.6
  • 14
    • 84893946206 scopus 로고    scopus 로고
    • Comparison of virus shedding after lived attenuated and pentavalent reassortant rotavirus vaccine
    • Hsieh Y.C., Wu F.T., Hsiung C.A., Wu H.S., Chang K.Y., Huang Y.C. Comparison of virus shedding after lived attenuated and pentavalent reassortant rotavirus vaccine. Vaccine 2014, 32:1199-1204.
    • (2014) Vaccine , vol.32 , pp. 1199-1204
    • Hsieh, Y.C.1    Wu, F.T.2    Hsiung, C.A.3    Wu, H.S.4    Chang, K.Y.5    Huang, Y.C.6
  • 15
    • 20444410725 scopus 로고    scopus 로고
    • Quantitative real-time PCR assays for detection of human adenoviruses and identification of serotypes 40 and 41
    • Jothikumar N., Cromeans T.L., Hill V.R., Lu X., Sobsey M.D., Erdman D.D. Quantitative real-time PCR assays for detection of human adenoviruses and identification of serotypes 40 and 41. Appl. Environ. Microbiol. 2005, 71:3131-3136.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 3131-3136
    • Jothikumar, N.1    Cromeans, T.L.2    Hill, V.R.3    Lu, X.4    Sobsey, M.D.5    Erdman, D.D.6
  • 20
    • 33745634395 scopus 로고    scopus 로고
    • Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
    • Li W., Godzik A. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 2006, 22:1658-1659.
    • (2006) Bioinformatics , vol.22 , pp. 1658-1659
    • Li, W.1    Godzik, A.2
  • 21
    • 0014333409 scopus 로고
    • Small intestine dysfunction in Pakistanis and Americans resident in Pakistan
    • Lindenbaum J. Small intestine dysfunction in Pakistanis and Americans resident in Pakistan. Am. J. Clin. Nutr. 1968, 21:1023-1029.
    • (1968) Am. J. Clin. Nutr. , vol.21 , pp. 1023-1029
    • Lindenbaum, J.1
  • 22
    • 0015014985 scopus 로고
    • Recovery of small-intestinal structure and function after residence in the tropics. I. Studies in Peace Corps volunteers
    • Lindenbaum J., Gerson C.D., Kent T.H. Recovery of small-intestinal structure and function after residence in the tropics. I. Studies in Peace Corps volunteers. Ann. Intern. Med. 1971, 74:218-222.
    • (1971) Ann. Intern. Med. , vol.74 , pp. 218-222
    • Lindenbaum, J.1    Gerson, C.D.2    Kent, T.H.3
  • 23
    • 74849137866 scopus 로고    scopus 로고
    • High prevalence of species D human adenoviruses in fecal specimens from Urban Kenyan children with diarrhea
    • Magwalivha M., Wolfaardt M., Kiulia N.M., van Zyl W.B., Mwenda J.M., Taylor M.B. High prevalence of species D human adenoviruses in fecal specimens from Urban Kenyan children with diarrhea. J. Med. Virol. 2010, 82:77-84.
    • (2010) J. Med. Virol. , vol.82 , pp. 77-84
    • Magwalivha, M.1    Wolfaardt, M.2    Kiulia, N.M.3    van Zyl, W.B.4    Mwenda, J.M.5    Taylor, M.B.6
  • 30
    • 0031689829 scopus 로고    scopus 로고
    • Fecal excretion of a nonenveloped DNA virus (TTV) associated with posttransfusion non-A-G hepatitis
    • Okamoto H., Akahane Y., Ukita M., Fukuda M., Tsuda F., Miyakawa Y., Mayumi M. Fecal excretion of a nonenveloped DNA virus (TTV) associated with posttransfusion non-A-G hepatitis. J. Med. Virol. 1998, 56:128-132.
    • (1998) J. Med. Virol. , vol.56 , pp. 128-132
    • Okamoto, H.1    Akahane, Y.2    Ukita, M.3    Fukuda, M.4    Tsuda, F.5    Miyakawa, Y.6    Mayumi, M.7
  • 31
    • 0016696564 scopus 로고
    • Ecology of enteroviruses in tropics. I. Circulation of enteroviruses in healthy infants in tropical urban area
    • Otatume S., Addy P. Ecology of enteroviruses in tropics. I. Circulation of enteroviruses in healthy infants in tropical urban area. Jpn. J. Microbiol. 1975, 19:201-209.
    • (1975) Jpn. J. Microbiol. , vol.19 , pp. 201-209
    • Otatume, S.1    Addy, P.2
  • 32
    • 34447577520 scopus 로고    scopus 로고
    • Enteroviruses: polioviruses, coxsackieviruses, echoviruses, and newer enteroviruses
    • Lippincott Williams and Wilkins, Philadelphia, D. Knipe, P. Howley (Eds.)
    • Pallansch M., Roos R Enteroviruses: polioviruses, coxsackieviruses, echoviruses, and newer enteroviruses. Fields Virology 2007, 839-894. Lippincott Williams and Wilkins, Philadelphia. 5th ed. D. Knipe, P. Howley (Eds.).
    • (2007) Fields Virology , pp. 839-894
    • Pallansch, M.1    Roos, R.2
  • 34
    • 0028918072 scopus 로고
    • Comparative nucleotide and amino acid sequence analysis of the sequence-specific RNA-binding rotavirus nonstructural protein NSP3
    • Rao C.D., Das M., Ilango P., Lalwani R., Rao B.S., Gowda K. Comparative nucleotide and amino acid sequence analysis of the sequence-specific RNA-binding rotavirus nonstructural protein NSP3. Virology 1995, 207:327-333.
    • (1995) Virology , vol.207 , pp. 327-333
    • Rao, C.D.1    Das, M.2    Ilango, P.3    Lalwani, R.4    Rao, B.S.5    Gowda, K.6
  • 36
    • 77950595242 scopus 로고    scopus 로고
    • Detection of human coronaviruses in children with acute gastroenteritis
    • Risku M., Lappalainen S., Rasanen S., Vesikari T. Detection of human coronaviruses in children with acute gastroenteritis. J. Clin Virol 2010, 48:27-30.
    • (2010) J. Clin Virol , vol.48 , pp. 27-30
    • Risku, M.1    Lappalainen, S.2    Rasanen, S.3    Vesikari, T.4
  • 37
    • 34447573808 scopus 로고    scopus 로고
    • An internally controlled, one-step, real-time RT-PCR assay for norovirus detection and genogrouping
    • Rolfe K.J., Parmar S., Mururi D., Wreghitt T.G., Jalal H., Zhang H., Curran M.D. An internally controlled, one-step, real-time RT-PCR assay for norovirus detection and genogrouping. J. Clin. Virol. 2007, 39:318-321.
    • (2007) J. Clin. Virol. , vol.39 , pp. 318-321
    • Rolfe, K.J.1    Parmar, S.2    Mururi, D.3    Wreghitt, T.G.4    Jalal, H.5    Zhang, H.6    Curran, M.D.7
  • 39
    • 0028924519 scopus 로고
    • Malnutrition among rural aboriginal children in the Top End of the Northern Territory
    • Ruben A.R., Walker A.C. Malnutrition among rural aboriginal children in the Top End of the Northern Territory. Med. J. Austr. 1995, 162:400-403.
    • (1995) Med. J. Austr. , vol.162 , pp. 400-403
    • Ruben, A.R.1    Walker, A.C.2
  • 40
    • 38649115342 scopus 로고    scopus 로고
    • Microbial influences in inflammatory bowel diseases
    • Sartor R.B. Microbial influences in inflammatory bowel diseases. Gastroenterology 2008, 134:577-594.
    • (2008) Gastroenterology , vol.134 , pp. 577-594
    • Sartor, R.B.1
  • 42
    • 0024417450 scopus 로고
    • Hay fever, hygiene, and household size
    • Strachan D.P. Hay fever, hygiene, and household size. Br. Med. J. 1989, 299:1259-1260.
    • (1989) Br. Med. J. , vol.299 , pp. 1259-1260
    • Strachan, D.P.1
  • 45
    • 0034766782 scopus 로고    scopus 로고
    • Rapid detection of enterovirus RNA in cerebrospinal fluid specimens with a novel single-tube real-time reverse transcription-PCR assay
    • Verstrepen W.A., Kuhn S., Kockx M.M., Van De Vyvere M.E., Mertens A.H. Rapid detection of enterovirus RNA in cerebrospinal fluid specimens with a novel single-tube real-time reverse transcription-PCR assay. J. Clin. Microbiol. 2001, 39:4093-4096.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 4093-4096
    • Verstrepen, W.A.1    Kuhn, S.2    Kockx, M.M.3    Van De Vyvere, M.E.4    Mertens, A.H.5
  • 47
    • 84934435151 scopus 로고    scopus 로고
    • A pancoronavirus RT-PCR assay for detection of all known coronaviruses
    • Vijgen L., Moes E., Keyaerts E., Li S., Van Ranst M. A pancoronavirus RT-PCR assay for detection of all known coronaviruses. Methods Mol. Biol. 2008, 454:3-12.
    • (2008) Methods Mol. Biol. , vol.454 , pp. 3-12
    • Vijgen, L.1    Moes, E.2    Keyaerts, E.3    Li, S.4    Van Ranst, M.5


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