-
1
-
-
18844454509
-
Elucidation of the molecular structures of components of the phycobilisome: Reconstructing a giant
-
1:CAS:528:DC%2BD2MXjvVSqur8%3D 15977057
-
Adir N (2005) Elucidation of the molecular structures of components of the phycobilisome: reconstructing a giant. Photosynth Res 85:15-32
-
(2005)
Photosynth Res
, vol.85
, pp. 15-32
-
-
Adir, N.1
-
3
-
-
0032189050
-
Deletion of the PB-loop in the LCM subunit does not affect phycobilisome assembly or energy transfer functions in the cyanobacterium Synechocystis sp. PCC 6714
-
1:CAS:528:DyaK1cXmsVylu74%3D 9799114
-
Ajlani G, Vernotte C (1998) Deletion of the PB-loop in the LCM subunit does not affect phycobilisome assembly or energy transfer functions in the cyanobacterium Synechocystis sp. PCC 6714. Eur J Biochem 257:154-159
-
(1998)
Eur J Biochem
, vol.257
, pp. 154-159
-
-
Ajlani, G.1
Vernotte, C.2
-
4
-
-
0029147611
-
Phycobilisome core mutants of Synechocystis PCC 6803
-
Ajlani G, Vernotte C, DiMagno L (1995) Phycobilisome core mutants of Synechocystis PCC 6803. Biochim Biophys Acta 1231:189-196
-
(1995)
Biochim Biophys Acta
, vol.1231
, pp. 189-196
-
-
Ajlani, G.1
Vernotte, C.2
Dimagno, L.3
-
5
-
-
61349160019
-
Structural organization of phycobilisomes from Synechocystis sp. Strain PCC 6803 and their interaction with the membrane
-
1:CAS:528:DC%2BD1MXivVeltrg%3D 19344661
-
Arteni AA, Ajlani G, Boekema EJ (2009) Structural organization of phycobilisomes from Synechocystis sp. strain PCC 6803 and their interaction with the membrane. Biochim Biophys Acta 1787:272-279
-
(2009)
Biochim Biophys Acta
, vol.1787
, pp. 272-279
-
-
Arteni, A.A.1
Ajlani, G.2
Boekema, E.J.3
-
6
-
-
0035964342
-
Electrostatics of nanosystems: Application to microtubules and the ribosome
-
56910 1:CAS:528:DC%2BD3MXmvFWisbc%3D 11517324
-
Baker N, Sept D, Joseph S (2001) Electrostatics of nanosystems: application to microtubules and the ribosome. Proc Natl Acad Sci USA 98:10037-10041
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 10037-10041
-
-
Baker, N.1
Sept, D.2
Joseph, S.3
-
7
-
-
84857755822
-
The photophysics of the orange carotenoid protein, a light-powered molecular switch
-
1:CAS:528:DC%2BC38XosFCjuw%3D%3D 22257008
-
Berera R, van Stokkum IHM, Gwizdala M, Wilson A, Kirilovsky D, van Grondelle R (2012) The photophysics of the orange carotenoid protein, a light-powered molecular switch. J Phys Chem B 116:2568-2574
-
(2012)
J Phys Chem B
, vol.116
, pp. 2568-2574
-
-
Berera, R.1
Van Stokkum, I.H.M.2
Gwizdala, M.3
Wilson, A.4
Kirilovsky, D.5
Van Grondelle, R.6
-
8
-
-
84881446676
-
The excited states of the inactive and active forms of the orange carotenoid protein
-
1:CAS:528:DC%2BC3sXhtVWhu73O 23799323
-
Berera R, Gwizdala M, van Stokkum IHM, Kirilovsky D, van Grondelle R (2013) The excited states of the inactive and active forms of the orange carotenoid protein. J Phys Chem B 117:9121-9128
-
(2013)
J Phys Chem B
, vol.117
, pp. 9121-9128
-
-
Berera, R.1
Gwizdala, M.2
Van Stokkum, I.H.M.3
Kirilovsky, D.4
Van Grondelle, R.5
-
9
-
-
84858012698
-
Unique properties versus common themes: The atypical cyanobacterium Gloeobacter violaceus PCC 7421 is capable of state transitions and blue-light-induced fluorescence quenching
-
Bernát G, Schreiber U, Sendtko E, Stadnichuk I, Rexroth S, Rögner M, Koenig F (2011) Unique properties versus common themes: the atypical cyanobacterium Gloeobacter violaceus PCC 7421 is capable of state transitions and blue-light-induced fluorescence quenching. Plant Cell Physiol 53:528-542
-
(2011)
Plant Cell Physiol
, vol.53
, pp. 528-542
-
-
Bernát, G.1
Schreiber, U.2
Sendtko, E.3
Stadnichuk, I.4
Rexroth, S.5
Rögner, M.6
Koenig, F.7
-
10
-
-
77954925946
-
Identification of a protein required for recovery of full antenna capacity in OCP-related photoprotective mechanism in cyanobacteria
-
2895087 1:CAS:528:DC%2BC3cXot1eksbg%3D 20534537
-
Boulay C, Wilson A, D'Haene S, Kirilovsky D (2010) Identification of a protein required for recovery of full antenna capacity in OCP-related photoprotective mechanism in cyanobacteria. Proc Natl Acad Sci USA 107:11620-11625
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 11620-11625
-
-
Boulay, C.1
Wilson, A.2
D'Haene, S.3
Kirilovsky, D.4
-
11
-
-
0029037179
-
Isolation, crystallization, crystal structure analysis and refinement of allophycocyanin from the cyanobacterium Spirulina platensis at 2.3 Å resolution
-
1:CAS:528:DyaK2MXmtlWrs7o%3D 7783202
-
Brejc K, Ficner R, Huber R, Steinbacher S (1995) Isolation, crystallization, crystal structure analysis and refinement of allophycocyanin from the cyanobacterium Spirulina platensis at 2.3 Å resolution. J Mol Biol 249:424-440
-
(1995)
J Mol Biol
, vol.249
, pp. 424-440
-
-
Brejc, K.1
Ficner, R.2
Huber, R.3
Steinbacher, S.4
-
12
-
-
84986513567
-
Determining atom-centered monopoles from molecular electrostatic potentials: The need for high sampling density in formamide conformational analysis
-
Breneman M, Wiberg KB (2004) Determining atom-centered monopoles from molecular electrostatic potentials: the need for high sampling density in formamide conformational analysis. J Comp Chem 11:361-373
-
(2004)
J Comp Chem
, vol.11
, pp. 361-373
-
-
Breneman, M.1
Wiberg, K.B.2
-
13
-
-
0025882840
-
The "anchor polypeptide" of cyanobacterial phycobilisomes. Molecular characterization of the Synechococcus sp. PCC 6301 apcE gene
-
1:CAS:528:DyaK38XhsVSj 1901865
-
Capuano V, Braux A-S, Tandeau de Marsac N, Houmard J (1991) The "anchor polypeptide" of cyanobacterial phycobilisomes. Molecular characterization of the Synechococcus sp. PCC 6301 apcE gene. J Biol Chem 266:7239-7247
-
(1991)
J Biol Chem
, vol.266
, pp. 7239-7247
-
-
Capuano, V.1
Braux, A.-S.2
Tandeau De Marsac, N.3
Houmard, J.4
-
14
-
-
38949120086
-
Theory of the J-band: From Frenkel exciton to the charge transfer
-
1:CAS:528:DC%2BD1cXjs1emsLo%3D
-
Egorov VV, Alfimov MV (2007) Theory of the J-band: from Frenkel exciton to the charge transfer. Phys-Uspekhi 50:985-1029
-
(2007)
Phys-Uspekhi
, vol.50
, pp. 985-1029
-
-
Egorov, V.V.1
Alfimov, M.V.2
-
15
-
-
84930381334
-
-
O. Sinanoglou (eds)
-
O. Sinanoglou (eds)
-
(1965)
-
-
Förster, T.1
-
16
-
-
0035822219
-
Fluorescence spectroscopy of all-trans-anhydrorhodovibrin and spirilloxanthin: Detection of the 1B u - Fluorescence
-
Fuji R, Ishikawa T, Koyama Y, Taguchi M, Isobe Y, Nagae H, Watanabe Y (2001) Fluorescence spectroscopy of all-trans-anhydrorhodovibrin and spirilloxanthin: detection of the 1B u - fluorescence. J Phys Chem A 105:5348-5355
-
(2001)
J Phys Chem A
, vol.105
, pp. 5348-5355
-
-
Fuji, R.1
Ishikawa, T.2
Koyama, Y.3
Taguchi, M.4
Isobe, Y.5
Nagae, H.6
Watanabe, Y.7
-
17
-
-
25444435905
-
Preferential incorporation of coloured-carotenoids occurs in the LH2 complexes from non-sulphur purple bacteria under carotenoid-limiting conditions
-
1:CAS:528:DC%2BD2MXhtVWls7rP 16172923
-
Gall A, Henry S, Takaichi S, Robert B, Cogdell RJ (2005) Preferential incorporation of coloured-carotenoids occurs in the LH2 complexes from non-sulphur purple bacteria under carotenoid-limiting conditions. Photosynth Res 86:25-35
-
(2005)
Photosynth Res
, vol.86
, pp. 25-35
-
-
Gall, A.1
Henry, S.2
Takaichi, S.3
Robert, B.4
Cogdell, R.J.5
-
18
-
-
84865554385
-
Molecular insights into the terminal energy acceptor in cyanobacterial phycobilisome
-
1:CAS:528:DC%2BC38Xht1GrsrzM 22758351
-
Gao X, Wei T, Zhang N, Xie B, Su H, Zhang X, Chen X, Zhou B, Wang Z, Wu J, Zhang Y (2012) Molecular insights into the terminal energy acceptor in cyanobacterial phycobilisome. Mol Microbiol 85:907-915
-
(2012)
Mol Microbiol
, vol.85
, pp. 907-915
-
-
Gao, X.1
Wei, T.2
Zhang, N.3
Xie, B.4
Su, H.5
Zhang, X.6
Chen, X.7
Zhou, B.8
Wang, Z.9
Wu, J.10
Zhang, Y.11
-
19
-
-
0028018301
-
Spectroscopic studies of phycobilisome subcore preparations lacking key core chromophores: Assignment of excited state energies to the LCM, β18 and αaP-B chromophores
-
1:CAS:528:DyaK2cXmtVWis7s%3D 8043589
-
Gindt YM, Zhou J, Bryant DA, Sauer K (1994) Spectroscopic studies of phycobilisome subcore preparations lacking key core chromophores: assignment of excited state energies to the LCM, β18 and αAP-B chromophores. Biochim Biophys Acta 1186:153-162
-
(1994)
Biochim Biophys Acta
, vol.1186
, pp. 153-162
-
-
Gindt, Y.M.1
Zhou, J.2
Bryant, D.A.3
Sauer, K.4
-
20
-
-
77957083721
-
Phycobilisomes
-
1:CAS:528:DyaL1MXitVyktLw%3D
-
Glazer AN (1988) Phycobilisomes. Methods Enzymol 167:304-312
-
(1988)
Methods Enzymol
, vol.167
, pp. 304-312
-
-
Glazer, A.N.1
-
21
-
-
0027142791
-
Reconstitution of allophycocyanin from Mastigocladus laminosus with isolated linker polypeptide
-
Gottschalk L, Lottspeich F, Scheer H (2008) Reconstitution of allophycocyanin from Mastigocladus laminosus with isolated linker polypeptide. Photochem Photobiol 58:761-767
-
(2008)
Photochem Photobiol
, vol.58
, pp. 761-767
-
-
Gottschalk, L.1
Lottspeich, F.2
Scheer, H.3
-
22
-
-
79958812733
-
Extended multi-configuration quasi-degenerate perturbation theory: The new approach to multi-state multi-reference perturbation theory
-
21663350
-
Granovsky AA (2011) Extended multi-configuration quasi-degenerate perturbation theory: The new approach to multi-state multi-reference perturbation theory. J Chem Phys 134:214113
-
(2011)
J Chem Phys
, vol.134
, pp. 214113
-
-
Granovsky, A.A.1
-
23
-
-
84864487620
-
-
Accessed 10 Sep 2014
-
Granovsky AA (2014) Firefly version 8.1.0. http://classic.chem.msu.su/gran/gamess/index.html. Accessed 10 Sep 2014
-
(2014)
Firefly Version 8.1.0.
-
-
Granovsky, A.A.1
-
24
-
-
80051943328
-
In vitro reconstitution system of the cyanobacterial photoprotective mechanism mediated by the orange carotenoid protein in Synechocystis PCC 6803
-
3226224 1:CAS:528:DC%2BC3MXhtFeqsL7F 21764991
-
Gwizdala M, Wilson A, Kirilovsky D (2011) In vitro reconstitution system of the cyanobacterial photoprotective mechanism mediated by the orange carotenoid protein in Synechocystis PCC 6803. Plant Cell 23:2631-2643
-
(2011)
Plant Cell
, vol.23
, pp. 2631-2643
-
-
Gwizdala, M.1
Wilson, A.2
Kirilovsky, D.3
-
25
-
-
84872116028
-
Characterization of Synechocystis PCC 6803 fluorescence recovery protein involved in photoprotection
-
1:CAS:528:DC%2BC3sXitlaju78%3D 23159727
-
Gwizdala M, Wilson A, Omairi-Nasser A, Kirilovsky D (2013) Characterization of Synechocystis PCC 6803 fluorescence recovery protein involved in photoprotection. Biochim Biophys Acta 1827:348-354
-
(2013)
Biochim Biophys Acta
, vol.1827
, pp. 348-354
-
-
Gwizdala, M.1
Wilson, A.2
Omairi-Nasser, A.3
Kirilovsky, D.4
-
26
-
-
84930376724
-
GROMACS 4.5: A high-throughput and highly parallel open source molecular simulation toolkit
-
Hess B, Kutzner C, van der Spoel D, Lindhal E (2013) GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit. Bioinformatics 29:848-854
-
(2013)
Bioinformatics
, vol.29
, pp. 848-854
-
-
Hess, B.1
Kutzner, C.2
Van Der Spoel, D.3
Lindhal, E.4
-
27
-
-
84891634061
-
The back and forth energy transfer between carotenoids and chlorophylls and its role in the regulation of light harvesting
-
1:CAS:528:DC%2BC3sXhvFKgt7nK 23575737
-
Holleboom CP, Walla PJ (2014) The back and forth energy transfer between carotenoids and chlorophylls and its role in the regulation of light harvesting. Photosynth Res 119:215-221
-
(2014)
Photosynth Res
, vol.119
, pp. 215-221
-
-
Holleboom, C.P.1
Walla, P.J.2
-
28
-
-
0019819335
-
A carotenoid protein from cyanobacteria
-
1:CAS:528:DyaL38XisVem
-
Holt TK, Krogmann DW (1981) A carotenoid protein from cyanobacteria. Biochim Biophys Acta 637:408-414
-
(1981)
Biochim Biophys Acta
, vol.637
, pp. 408-414
-
-
Holt, T.K.1
Krogmann, D.W.2
-
29
-
-
84989762024
-
Structure-function relationship and energy transfer in phycobiliprotein antennae
-
Holzwarth AR (1992) Structure-function relationship and energy transfer in phycobiliprotein antennae. Physiol Plant 83:518-528
-
(1992)
Physiol Plant
, vol.83
, pp. 518-528
-
-
Holzwarth, A.R.1
-
30
-
-
0025186884
-
Studies on chromophore coupling in isolated phycobiliproteins
-
1280650 1:CAS:528:DyaK3cXpsFOisw%3D%3D 19431751
-
Holzwarth AR, Bittersma E, Reuter W, Wehrmeyer W (1990) Studies on chromophore coupling in isolated phycobiliproteins. Biophys J 57:133-145
-
(1990)
Biophys J
, vol.57
, pp. 133-145
-
-
Holzwarth, A.R.1
Bittersma, E.2
Reuter, W.3
Wehrmeyer, W.4
-
31
-
-
84862164245
-
ApcD, ApcF and ApcE are not required for the orange carotenoid protein related phycobilisome fluorescence quenching in the cyanobacterium Synechocystis PCC 6803
-
1:CAS:528:DC%2BC38XosVaku7g%3D 22172739
-
Jallet D, Gwizdala M, Kirilovsky D (2012) ApcD, ApcF and ApcE are not required for the orange carotenoid protein related phycobilisome fluorescence quenching in the cyanobacterium Synechocystis PCC 6803. Biochim Biophys Acta 1817:1418-1427
-
(2012)
Biochim Biophys Acta
, vol.1817
, pp. 1418-1427
-
-
Jallet, D.1
Gwizdala, M.2
Kirilovsky, D.3
-
32
-
-
0029912748
-
Development and testing of the OPLSA all-atom force field on conformational energetics and properties of organic liquids
-
1:CAS:528:DyaK28XmtlOitrs%3D
-
Jorgensen WL, Maxwell DS, Tirado-Rives J (1996) Development and testing of the OPLSA all-atom force field on conformational energetics and properties of organic liquids. J Am Chem Soc 118:11225-11236
-
(1996)
J Am Chem Soc
, vol.118
, pp. 11225-11236
-
-
Jorgensen, W.L.1
Maxwell, D.S.2
Tirado-Rives, J.3
-
33
-
-
0000127140
-
Method for estimating the configurational entropy of macromolecules
-
1:CAS:528:DyaL3MXhvFWmsbY%3D
-
Karplus M, Kushick JN (1981) Method for estimating the configurational entropy of macromolecules. Macromolecules 14:325-332
-
(1981)
Macromolecules
, vol.14
, pp. 325-332
-
-
Karplus, M.1
Kushick, J.N.2
-
34
-
-
4043181319
-
Structure and function of the water-soluble carotenoid-binding proteins in cyanobacteria
-
1:CAS:528:DC%2BD2cXmt1Kqsrs%3D 16034528
-
Kerfeld CA (2004) Structure and function of the water-soluble carotenoid-binding proteins in cyanobacteria. Photosynth Res 81:215-225
-
(2004)
Photosynth Res
, vol.81
, pp. 215-225
-
-
Kerfeld, C.A.1
-
35
-
-
84880237267
-
The orange carotenoid protein: A blue-green light photoactive protein
-
1:CAS:528:DC%2BC3sXps1yms7w%3D 23396391
-
Kirilovsky D, Kerfeld CA (2013) The orange carotenoid protein: a blue-green light photoactive protein. Photochem Photobiol Sci 12:1135-1143
-
(2013)
Photochem Photobiol Sci
, vol.12
, pp. 1135-1143
-
-
Kirilovsky, D.1
Kerfeld, C.A.2
-
36
-
-
79955687917
-
Carotenoid photoprotection in artificial photosynthetic antennas
-
1:CAS:528:DC%2BC3MXkslemt78%3D 21491907
-
Kloz M, Pilla S, Kodis G, Gust D, Moore TA, Moore AL, van Grondelle R, Kennis JTM (2011) Carotenoid photoprotection in artificial photosynthetic antennas. J Am Chem Soc 133:7007-7015
-
(2011)
J Am Chem Soc
, vol.133
, pp. 7007-7015
-
-
Kloz, M.1
Pilla, S.2
Kodis, G.3
Gust, D.4
Moore, T.A.5
Moore, A.L.6
Van Grondelle, R.7
Kennis, J.T.M.8
-
37
-
-
84887745607
-
Statistical physics and computer simulations
-
1:CAS:528:DC%2BC3sXhsFOju7zO 24090414
-
Knecht S, Marian CM, Kongsted J, Mennucci B (2013) Statistical physics and computer simulations. J Phys Chem B 117:13808-13815
-
(2013)
J Phys Chem B
, vol.117
, pp. 13808-13815
-
-
Knecht, S.1
Marian, C.M.2
Kongsted, J.3
Mennucci, B.4
-
38
-
-
0034521981
-
Calculating structures and free energies of complex molecules: Combining molecular mechanics and continuum models
-
1:CAS:528:DC%2BD3cXmvFGiu7g%3D 11123888
-
Kollman PA, Massova I, Reyes C, Kuhn B, Huo S, Chong L, Lee M, Lee T, Duan Y, Wang W, Donini O, Cieplak P, Srinivasan J, Case DA, Cheatham TE (2000) Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models. Acc Chem Res 33:889-897
-
(2000)
Acc Chem Res
, vol.33
, pp. 889-897
-
-
Kollman, P.A.1
Massova, I.2
Reyes, C.3
Kuhn, B.4
Huo, S.5
Chong, L.6
Lee, M.7
Lee, T.8
Duan, Y.9
Wang, W.10
Donini, O.11
Cieplak, P.12
Srinivasan, J.13
Case, D.A.14
Cheatham, T.E.15
-
39
-
-
0035006465
-
Energy transfer in peridinin-chlorophyll-a protein from Amphidinium carterae studied by polarized transient absorption and target analysis
-
1301469 1:CAS:528:DC%2BD3MXkvFSqtr0%3D 11371458
-
Krueger BP, Lampoura SS, van Stokkum IHM, Papagiannakis E, Salvedra JM (2001) Energy transfer in peridinin-chlorophyll-a protein from Amphidinium carterae studied by polarized transient absorption and target analysis. Biophys J 80:2843-2855
-
(2001)
Biophys J
, vol.80
, pp. 2843-2855
-
-
Krueger, B.P.1
Lampoura, S.S.2
Van Stokkum, I.H.M.3
Papagiannakis, E.4
Salvedra, J.M.5
-
40
-
-
84860808444
-
Investigation of OCP-triggered dissipation of excitation energy in PSI/PSII-less Synechocystis sp. PCC 6803 mutant using non-linear laser fluorimetry
-
1:CAS:528:DC%2BC38XnslKrsbs%3D 22484220
-
Kuzminov FI, Karapetyan NV, Rakhimberdieva MG, Elanskaya IV, Gorbunov MY, Fadeev VV (2012) Investigation of OCP-triggered dissipation of excitation energy in PSI/PSII-less Synechocystis sp. PCC 6803 mutant using non-linear laser fluorimetry. Biochim Biophys Acta 1817:1012-1021
-
(2012)
Biochim Biophys Acta
, vol.1817
, pp. 1012-1021
-
-
Kuzminov, F.I.1
Karapetyan, N.V.2
Rakhimberdieva, M.G.3
Elanskaya, I.V.4
Gorbunov, M.Y.5
Fadeev, V.V.6
-
41
-
-
0031578979
-
Fast evaluation of density functional exchange-correlation terms using the expansion of the electron density in auxiliary basis sets
-
1:CAS:528:DyaK2sXotFWktr8%3D
-
Laikov DN (1997) Fast evaluation of density functional exchange-correlation terms using the expansion of the electron density in auxiliary basis sets. Chem Phys Lett 281:151-156
-
(1997)
Chem Phys Lett
, vol.281
, pp. 151-156
-
-
Laikov, D.N.1
-
43
-
-
79955376492
-
Two-photon study on the electronic interaction between the first excited singlet states in carotenoid-tetrapyrrole dyads
-
1:CAS:528:DC%2BC3MXjs1Shsb0%3D 21417489
-
Liao PN, Pillai S, Gust D, Moore TA, Moore AL, Walla PJ (2011) Two-photon study on the electronic interaction between the first excited singlet states in carotenoid-tetrapyrrole dyads. J Phys Chem A 115:4082-4091
-
(2011)
J Phys Chem A
, vol.115
, pp. 4082-4091
-
-
Liao, P.N.1
Pillai, S.2
Gust, D.3
Moore, T.A.4
Moore, A.L.5
Walla, P.J.6
-
44
-
-
0027250627
-
Contribution of hydration to protein folding thermodynamics. II. the entropy and Gibbs energy of hydration
-
8393941
-
Makhatadze GI, Privalov PL (1993) Contribution of hydration to protein folding thermodynamics. II. The entropy and Gibbs energy of hydration. J Mol Biol 232:660-679
-
(1993)
J Mol Biol
, vol.232
, pp. 660-679
-
-
Makhatadze, G.I.1
Privalov, P.L.2
-
45
-
-
34247545267
-
A semiempirical approach to the intra-phycocyanin and inter-phycocyanin fluorescence resonance energy-transfer pathways in phycobilisomes
-
1:CAS:528:DC%2BD2sXktlKltbY%3D 17299727
-
Matamala AR, Almonacid DE, Figueroa MF, Martinez-Oyanedel J, Bunster MC (2007) A semiempirical approach to the intra-phycocyanin and inter-phycocyanin fluorescence resonance energy-transfer pathways in phycobilisomes. J Comput Chem 28:1200-1207
-
(2007)
J Comput Chem
, vol.28
, pp. 1200-1207
-
-
Matamala, A.R.1
Almonacid, D.E.2
Figueroa, M.F.3
Martinez-Oyanedel, J.4
Bunster, M.C.5
-
46
-
-
54849440307
-
Allophycocyanin trimer stability and functionality are primarily due to polar enhanced hydrophobicity of the phycocyanobilin binding pocket
-
1:CAS:528:DC%2BD1cXhtlaqsrfO 18823993
-
McGregor A, Klartag M, David L, Adir N (2008) Allophycocyanin trimer stability and functionality are primarily due to polar enhanced hydrophobicity of the phycocyanobilin binding pocket. J Mol Biol 384:406-421
-
(2008)
J Mol Biol
, vol.384
, pp. 406-421
-
-
McGregor, A.1
Klartag, M.2
David, L.3
Adir, N.4
-
47
-
-
37749053642
-
Phycobilisome-reaction centre interaction in cyanobacteria
-
1:CAS:528:DC%2BD1cXhvFOntA%3D%3D 17922214
-
Mullineaux CW (2008) Phycobilisome-reaction centre interaction in cyanobacteria. Photosynth Res 95:175-182
-
(2008)
Photosynth Res
, vol.95
, pp. 175-182
-
-
Mullineaux, C.W.1
-
48
-
-
84962394020
-
Ultrafast dynamics and excited state spectra of open-chain carotenoids at room and low temperatures
-
Niedwiedzki D, Koscielecki JF, Cong H, Sullivan JO, Gibson GN, Bridge RR, Frank HF (2007) Ultrafast dynamics and excited state spectra of open-chain carotenoids at room and low temperatures. J Phys Chem B 111:5984-5998
-
(2007)
J Phys Chem B
, vol.111
, pp. 5984-5998
-
-
Niedwiedzki, D.1
Koscielecki, J.F.2
Cong, H.3
Sullivan, J.O.4
Gibson, G.N.5
Bridge, R.R.6
Frank, H.F.7
-
49
-
-
84878984467
-
Evolution of flexible non-photochemical quenching mechanisms that regulate light harvesting in oxygenic photosynthesis
-
1:CAS:528:DC%2BC3sXlvV2rtrs%3D 23583332
-
Niyogi KK, Truong TB (2013) Evolution of flexible non-photochemical quenching mechanisms that regulate light harvesting in oxygenic photosynthesis. Curr Opin Plant Biol 16:307-314
-
(2013)
Curr Opin Plant Biol
, vol.16
, pp. 307-314
-
-
Niyogi, K.K.1
Truong, T.B.2
-
50
-
-
2342539764
-
Ultrafast dynamics of carotenoid excited states - From solution to natural and artificial systems
-
15080720
-
Polívka T, Sundström V (2004) Ultrafast dynamics of carotenoid excited states - from solution to natural and artificial systems. Chem Rev 104:2021-2071
-
(2004)
Chem Rev
, vol.104
, pp. 2021-2071
-
-
Polívka, T.1
Sundström, V.2
-
51
-
-
14844347730
-
Spectroscopic properties of the carotenoid 3′-hydroxyechinenone in the orange carotenoid protein from the cyanobacterium Arthrospira maxima
-
15751975
-
Polívka T, Kerfeld CA, Pascher T, Sundström V (2005) Spectroscopic properties of the carotenoid 3′-hydroxyechinenone in the orange carotenoid protein from the cyanobacterium Arthrospira maxima. Biochemistry 44:3994-4003
-
(2005)
Biochemistry
, vol.44
, pp. 3994-4003
-
-
Polívka, T.1
Kerfeld, C.A.2
Pascher, T.3
Sundström, V.4
-
52
-
-
84871987624
-
Carotenoid-protein interaction alters the S1 energy of hydroxyechinenone in the orange carotenoid protein
-
23084967
-
Polívka T, Chábera P, Kerfeld CA (2013) Carotenoid-protein interaction alters the S1 energy of hydroxyechinenone in the orange carotenoid protein. Biochim Biophys Acta 1827:248-254
-
(2013)
Biochim Biophys Acta
, vol.1827
, pp. 248-254
-
-
Polívka, T.1
Chábera, P.2
Kerfeld, C.A.3
-
53
-
-
0035951111
-
Interaction of phycobilisomes with photosystem II dimers and photosystem i monomers and trimers in the cyanobacterium Spirulina platensis
-
1:CAS:528:DC%2BD3MXosFCqsLw%3D 11747455
-
Rakhimberdieva MG, Boichenko VA, Karapetyan NV, Stadnichuk IN (2001) Interaction of phycobilisomes with photosystem II dimers and photosystem I monomers and trimers in the cyanobacterium Spirulina platensis. Biochemistry 40:15780-15788
-
(2001)
Biochemistry
, vol.40
, pp. 15780-15788
-
-
Rakhimberdieva, M.G.1
Boichenko, V.A.2
Karapetyan, N.V.3
Stadnichuk, I.N.4
-
54
-
-
4444227812
-
Carotenoid-induced quenching of the phycobilisome fluorescence in photosystem II-deficient mutant of Synechocystis sp
-
1:CAS:528:DC%2BD2cXnsFGlsrg%3D 15358544
-
Rakhimberdieva MG, Stadnichuk IN, Elanskaya IV, Karapetyan NV (2004) Carotenoid-induced quenching of the phycobilisome fluorescence in photosystem II-deficient mutant of Synechocystis sp. FEBS Lett 574:85-88
-
(2004)
FEBS Lett
, vol.574
, pp. 85-88
-
-
Rakhimberdieva, M.G.1
Stadnichuk, I.N.2
Elanskaya, I.V.3
Karapetyan, N.V.4
-
55
-
-
73249152250
-
Carotenoid-triggered energy dissipation in phycobilisomes of Synechocystis sp. PCC 6803 diverts excitation away from reaction centers of both photosystems
-
1:CAS:528:DC%2BC3cXkt1Gitg%3D%3D 19879235
-
Rakhimberdieva MG, Elanskaya IV, Vermaas WFJ, Karapetyan NV (2010) Carotenoid-triggered energy dissipation in phycobilisomes of Synechocystis sp. PCC 6803 diverts excitation away from reaction centers of both photosystems. Biochim Biophys Acta 1797:241-249
-
(2010)
Biochim Biophys Acta
, vol.1797
, pp. 241-249
-
-
Rakhimberdieva, M.G.1
Elanskaya, I.V.2
Vermaas, W.F.J.3
Karapetyan, N.V.4
-
56
-
-
84875880231
-
Understanding the electronic energy transfer pathways in the trimeric and hexameric aggregation state of cyanobacterial phycocyanin within the framework of Förster theory
-
1:CAS:528:DC%2BC3sXltVamtQ%3D%3D
-
Ren Y, Chi B, Melhem O, Wei K, Feng L, Li Y, Han X, Li D, Zhang Y, Wan J, Xu X, Yang M (2013) Understanding the electronic energy transfer pathways in the trimeric and hexameric aggregation state of cyanobacterial phycocyanin within the framework of Förster theory. J Comp Chem 34:1005-1012
-
(2013)
J Comp Chem
, vol.34
, pp. 1005-1012
-
-
Ren, Y.1
Chi, B.2
Melhem, O.3
Wei, K.4
Feng, L.5
Li, Y.6
Han, X.7
Li, D.8
Zhang, Y.9
Wan, J.10
Xu, X.11
Yang, M.12
-
57
-
-
50549092426
-
Accelerating and focusing protein-docking correlations using multi-dimensional rotational FFT generating functions
-
2732220 1:CAS:528:DC%2BD1cXhtVGlurvM 18591193
-
Ritchie DW, Kozakov D, Vajda S (2008) Accelerating and focusing protein-docking correlations using multi-dimensional rotational FFT generating functions. Bioinformatics 24:1865-1873
-
(2008)
Bioinformatics
, vol.24
, pp. 1865-1873
-
-
Ritchie, D.W.1
Kozakov, D.2
Vajda, S.3
-
58
-
-
0034438103
-
Efficient light harvesting through carotenoids
-
1:CAS:528:DC%2BD3MXkslWkt7k%3D 16228415
-
Ritz T, Damjanovic A, Schulten K, Zhang J-P, Koyama Y (2000) Efficient light harvesting through carotenoids. Photosynth Res 66:125-144
-
(2000)
Photosynth Res
, vol.66
, pp. 125-144
-
-
Ritz, T.1
Damjanovic, A.2
Schulten, K.3
Zhang, J.-P.4
Koyama, Y.5
-
59
-
-
80052599264
-
The photoprotective molecular switch in the photosystem II antenna
-
1:CAS:528:DC%2BC3MXhsFOgur%2FF 21569757
-
Ruban AV, Johnson MP, Duffy CDP (2012) The photoprotective molecular switch in the photosystem II antenna. Biochim Biophys Acta 1817:167-181
-
(2012)
Biochim Biophys Acta
, vol.1817
, pp. 167-181
-
-
Ruban, A.V.1
Johnson, M.P.2
Duffy, C.D.P.3
-
61
-
-
84893169025
-
General atomic and molecular electronic structure system
-
1:CAS:528:DyaK2cXhsFaqtQ%3D%3D
-
Schmidt MW, Baldridge KK, Boatz JA, Elbert ST, Gordon MS, Jensen JH, Koseki S, Matsunaga N, Nguyen KA, Su S, Windus TL, Dupuis M, Montgomery JA (1993) General atomic and molecular electronic structure system. J Comp Chem 14:1347-1363
-
(1993)
J Comp Chem
, vol.14
, pp. 1347-1363
-
-
Schmidt, M.W.1
Baldridge, K.K.2
Boatz, J.A.3
Elbert, S.T.4
Gordon, M.S.5
Jensen, J.H.6
Koseki, S.7
Matsunaga, N.8
Nguyen, K.A.9
Su, S.10
Windus, T.L.11
Dupuis, M.12
Montgomery, J.A.13
-
62
-
-
33746268611
-
Mechanism of the down regulation of photosynthesis by blue light in the cyanobacterium Synechocystis sp. PCC 6803
-
1:CAS:528:DC%2BD28XmtF2ru78%3D 16846238
-
Scott M, McCollum C, Vasil'ev S, Grozier C, Espie GS, Krol M, Huner NP, Bruce D (2006) Mechanism of the down regulation of photosynthesis by blue light in the cyanobacterium Synechocystis sp. PCC 6803. Biochemistry 45:8952-8958
-
(2006)
Biochemistry
, vol.45
, pp. 8952-8958
-
-
Scott, M.1
McCollum, C.2
Vasil'Ev, S.3
Grozier, C.4
Espie, G.S.5
Krol, M.6
Huner, N.P.7
Bruce, D.8
-
63
-
-
0028595909
-
Femtosecond spectral and anisotropy study of excitation-energy transfer between neighbouring alpha-80 and beta-81 chromophores of allophycocyanin trimers
-
Sharkov A, Kruykov I, Khoroshilov E, Kruykov P, Fisher R, Scheer H (1994) Femtosecond spectral and anisotropy study of excitation-energy transfer between neighbouring alpha-80 and beta-81 chromophores of allophycocyanin trimers. Biochim Biophys Acta-Bioenerg 1188:349-356
-
(1994)
Biochim Biophys Acta-Bioenerg
, vol.1188
, pp. 349-356
-
-
Sharkov, A.1
Kruykov, I.2
Khoroshilov, E.3
Kruykov, P.4
Fisher, R.5
Scheer, H.6
-
65
-
-
61349152946
-
Fluorescence changes accompanying short-term light adaptations in photosystem i and photosystem II of the cyanobacterium Synechocystis sp. PCC 6803 and phycobiliprotein-impaired mutants: State 1/state 2 transitions and carotenoid-induced quenching of the phycobilisomes
-
1:CAS:528:DC%2BD1MXitlSqt74%3D 19169839
-
Stadnichuk IN, Lukashev EP, Elanskaya IV (2009) Fluorescence changes accompanying short-term light adaptations in photosystem I and photosystem II of the cyanobacterium Synechocystis sp. PCC 6803 and phycobiliprotein-impaired mutants: state 1/state 2 transitions and carotenoid-induced quenching of the phycobilisomes. Photosynth Res 99:227-241
-
(2009)
Photosynth Res
, vol.99
, pp. 227-241
-
-
Stadnichuk, I.N.1
Lukashev, E.P.2
Elanskaya, I.V.3
-
66
-
-
78650285073
-
Far-red light-regulated efficient energy transfer from phycobilisomes to photosystem i in the red microalga Galdieria sulphuraria and photosystems-related heterogeneity of phycobilisome population
-
1:CAS:528:DC%2BC3cXhsFyktr%2FE 21036140
-
Stadnichuk IN, Bulychev AA, Lukashev EP, Sinetova MS, Khristin MS, Johnson MP, Ruban AV (2011a) Far-red light-regulated efficient energy transfer from phycobilisomes to photosystem I in the red microalga Galdieria sulphuraria and photosystems-related heterogeneity of phycobilisome population. Biochim Biophys Acta 1807:227-235
-
(2011)
Biochim Biophys Acta
, vol.1807
, pp. 227-235
-
-
Stadnichuk, I.N.1
Bulychev, A.A.2
Lukashev, E.P.3
Sinetova, M.S.4
Khristin, M.S.5
Johnson, M.P.6
Ruban, A.V.7
-
67
-
-
80052840378
-
Quenching of phycobilisome fluorescence by orange carotenoid-protein
-
1:CAS:528:DC%2BC3MXhtFyktrfJ
-
Stadnichuk IN, Yanyushin MF, Zhgarmukhamedov SK, Maksimov EG, Muronez EM, Paschenko VZ (2011b) Quenching of phycobilisome fluorescence by orange carotenoid-protein. Doklady Biochem Biophys 439:167-170
-
(2011)
Doklady Biochem Biophys
, vol.439
, pp. 167-170
-
-
Stadnichuk, I.N.1
Yanyushin, M.F.2
Zhgarmukhamedov, S.K.3
Maksimov, E.G.4
Muronez, E.M.5
Paschenko, V.Z.6
-
68
-
-
84862229082
-
Site of non-photochemical quenching of the phycobilisome by orange carotenoid protein in the cyanobacterium Synechocystis sp. PCC 6803
-
1:CAS:528:DC%2BC38XlvVSnu7c%3D 22483736
-
Stadnichuk IN, Yanyushin MF, Maksimov EG, Lukashev EP, Zharmukhamedov SK, Elanskaya IV, Paschenko VZ (2012) Site of non-photochemical quenching of the phycobilisome by orange carotenoid protein in the cyanobacterium Synechocystis sp. PCC 6803. Biochim Biophys Acta 1817:1436-1445
-
(2012)
Biochim Biophys Acta
, vol.1817
, pp. 1436-1445
-
-
Stadnichuk, I.N.1
Yanyushin, M.F.2
Maksimov, E.G.3
Lukashev, E.P.4
Zharmukhamedov, S.K.5
Elanskaya, I.V.6
Paschenko, V.Z.7
-
69
-
-
84879494889
-
Fluorescence quenching of the phycobilisome terminal emitter LCM from the cyanobacterium Synechocystis sp. PCC 6803 detected in vivo and in vitro
-
1:CAS:528:DC%2BC3sXhtFOrtrbE
-
Stadnichuk IN, Yanyushin MF, Bernát G, Zlenko DV, Krasilnikov PM, Lukashev EP, Maksimov EG, Paschenko VZ (2013) Fluorescence quenching of the phycobilisome terminal emitter LCM from the cyanobacterium Synechocystis sp. PCC 6803 detected in vivo and in vitro. J Photochem Photobiol B Biol 125:137-145
-
(2013)
J Photochem Photobiol B Biol
, vol.125
, pp. 137-145
-
-
Stadnichuk, I.N.1
Yanyushin, M.F.2
Bernát, G.3
Zlenko, D.V.4
Krasilnikov, P.M.5
Lukashev, E.P.6
Maksimov, E.G.7
Paschenko, V.Z.8
-
71
-
-
84878986302
-
Crystal structure of the FRP and identification of the active site for modulation of OCP-mediated photoprotection in cyanobacteria
-
3683793 1:CAS:528:DC%2BC3sXhtFOls7bF 23716688
-
Sutter M, Wilson A, Leverenz RL, Lopez-Igual R, Thurotte A, Salmeen AE, Kirilovsky D, Kerfeld CA (2013) Crystal structure of the FRP and identification of the active site for modulation of OCP-mediated photoprotection in cyanobacteria. Proc Natl Acad Sci USA 110:10022-10027
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 10022-10027
-
-
Sutter, M.1
Wilson, A.2
Leverenz, R.L.3
Lopez-Igual, R.4
Thurotte, A.5
Salmeen, A.E.6
Kirilovsky, D.7
Kerfeld, C.A.8
-
72
-
-
80755123456
-
Site, rate and mechanism of photoprotective quenching in cyanobacteria
-
1:CAS:528:DC%2BC3MXht1OnsbjF 21972788
-
Tian L, van Stokkum JHM, Koehorst RBM, Jongerius A, Kirilovsky D, van Amerongen H (2011) Site, rate and mechanism of photoprotective quenching in cyanobacteria. J Am Chem Soc 133:18304-18311
-
(2011)
J Am Chem Soc
, vol.133
, pp. 18304-18311
-
-
Tian, L.1
Van Stokkum, J.H.M.2
Koehorst, R.B.M.3
Jongerius, A.4
Kirilovsky, D.5
Van Amerongen, H.6
-
73
-
-
84859397126
-
Picosecond kinetics of light harvesting and photoprotective quenching in wild type and mutant phycobilisomes isolated from the cyanobacterium Synechocystis sp. PCC 6803
-
3318131 1:CAS:528:DC%2BC38XlsVWku7o%3D 22500770
-
Tian L, Gwizdala M, van Stokkum JHM, Koehorst RBM, van Amerongen H (2012) Picosecond kinetics of light harvesting and photoprotective quenching in wild type and mutant phycobilisomes isolated from the cyanobacterium Synechocystis sp. PCC 6803. Biophys J 102:1692-1700
-
(2012)
Biophys J
, vol.102
, pp. 1692-1700
-
-
Tian, L.1
Gwizdala, M.2
Van Stokkum, J.H.M.3
Koehorst, R.B.M.4
Van Amerongen, H.5
-
74
-
-
84887456201
-
Phycobilisome: Architecture of a light-harvesting supercomplex
-
1:CAS:528:DC%2BC3sXhsFCjsr%2FO 24081814
-
Watanabe M, Ikeuchi M (2013) Phycobilisome: architecture of a light-harvesting supercomplex. Photosynth Res 116:265-276
-
(2013)
Photosynth Res
, vol.116
, pp. 265-276
-
-
Watanabe, M.1
Ikeuchi, M.2
-
75
-
-
33745445226
-
A soluble carotenoid protein involved in phycobilisome-related energy dissipation in cyanobacteria
-
1425857 1:CAS:528:DC%2BD28Xjslaksbg%3D 16531492
-
Wilson A, Ajlani G, Verbavatz J-M, Vass I, Kerfeld CA, Kirilovsky D (2006) A soluble carotenoid protein involved in phycobilisome-related energy dissipation in cyanobacteria. Plant Cell 18:992-1007
-
(2006)
Plant Cell
, vol.18
, pp. 992-1007
-
-
Wilson, A.1
Ajlani, G.2
Verbavatz, J.-M.3
Vass, I.4
Kerfeld, C.A.5
Kirilovsky, D.6
-
76
-
-
50149083653
-
A photoactive carotenoid protein acting as light intensity sensor
-
Wilson A, Punginelli C, Gall A, Bonetti C, Alexandre M, Routaboul J-M, Kerfeld CA, van Grondelle R, Robert B, Kennis JTM, Kirilovsky D (2008) A photoactive carotenoid protein acting as light intensity sensor. Proc Natl Acad Sci USA 33:12075-12080
-
(2008)
Proc Natl Acad Sci USA
, vol.33
, pp. 12075-12080
-
-
Wilson, A.1
Punginelli, C.2
Gall, A.3
Bonetti, C.4
Alexandre, M.5
Routaboul, J.-M.6
Kerfeld, C.A.7
Van Grondelle, R.8
Robert, B.9
Kennis, J.T.M.10
Kirilovsky, D.11
-
77
-
-
77953313030
-
Structural determinants underlying photoprotection in the photoactive orange carotenoid protein of cyanobacteria
-
2881762 1:CAS:528:DC%2BC3cXmvFaqsr0%3D 20368334
-
Wilson A, Kinney JN, Zwart PH, Punginelli C, Haene SD, Perreau F, Klein MG, Kirilovsky D, Kerfeld CA (2010) Structural determinants underlying photoprotection in the photoactive orange carotenoid protein of cyanobacteria. J Biol Chem 285:18364-18375
-
(2010)
J Biol Chem
, vol.285
, pp. 18364-18375
-
-
Wilson, A.1
Kinney, J.N.2
Zwart, P.H.3
Punginelli, C.4
Haene, S.D.5
Perreau, F.6
Klein, M.G.7
Kirilovsky, D.8
Kerfeld, C.A.9
-
78
-
-
84863098670
-
The essential role of the N-terminal domain of the orange carotenoid protein in cyanobacterial photoprotection: Importance of a positive charge for phycobilisome binding
-
3442581 1:CAS:528:DC%2BC38XhtVOktLfE 22634762
-
Wilson A, Gwizdala M, Mezzettti A, Alexandre M, Kerfeld CA, Kirilovsky D (2012) The essential role of the N-terminal domain of the orange carotenoid protein in cyanobacterial photoprotection: importance of a positive charge for phycobilisome binding. Plant Cell 24:1972-1983
-
(2012)
Plant Cell
, vol.24
, pp. 1972-1983
-
-
Wilson, A.1
Gwizdala, M.2
Mezzettti, A.3
Alexandre, M.4
Kerfeld, C.A.5
Kirilovsky, D.6
-
79
-
-
0030687617
-
The orange carotenoid protein of Synechocystis PCC 6803
-
1:CAS:528:DyaK2sXntF2mtrk%3D 9398074
-
Wu YP, Krogmann DW (1997) The orange carotenoid protein of Synechocystis PCC 6803. Biochim Biophys Acta 1322:1-7
-
(1997)
Biochim Biophys Acta
, vol.1322
, pp. 1-7
-
-
Wu, Y.P.1
Krogmann, D.W.2
-
80
-
-
84887447564
-
Models and measurements of energy-dependent quenching
-
3824227 1:CAS:528:DC%2BC3sXhs1Cltr7L 23793348
-
Zaks J, Amarnath K (2013) Models and measurements of energy-dependent quenching. Photosynth Res 116:389-409
-
(2013)
Photosynth Res
, vol.116
, pp. 389-409
-
-
Zaks, J.1
Amarnath, K.2
-
81
-
-
84892581204
-
Molecular mechanism of photoactivation and structural location of the cyanobacterial orange carotenoid protein
-
3963514 24359496
-
Zhang H, Liu H, Niedzwiedzki DM, Prado M, Jiang J, Gross ML, Blankenship RE (2014) Molecular mechanism of photoactivation and structural location of the cyanobacterial orange carotenoid protein. Biochemistry 53:13-19
-
(2014)
Biochemistry
, vol.53
, pp. 13-19
-
-
Zhang, H.1
Liu, H.2
Niedzwiedzki, D.M.3
Prado, M.4
Jiang, J.5
Gross, M.L.6
Blankenship, R.E.7
-
82
-
-
11144306461
-
Reconstitution of phycobilisome core-membrane linker, LCM, by autocatalytic chromophore binding to ApcE
-
1:CAS:528:DC%2BD2cXhtFGht77F 15620367
-
Zhao K-H, Su P, Böhm S, Song B, Zhou Mbubenzer C, Scheer H (2005) Reconstitution of phycobilisome core-membrane linker, LCM, by autocatalytic chromophore binding to ApcE. Biochim Biophys Acta 1706:81-87
-
(2005)
Biochim Biophys Acta
, vol.1706
, pp. 81-87
-
-
Zhao, K.-H.1
Su, P.2
Böhm, S.3
Song, B.4
Zhou Mbubenzer, C.5
Scheer, H.6
-
83
-
-
3042737690
-
Effect of a conjugated carbonyl group on the photophysical properties of carotenoids
-
1:CAS:528:DC%2BD2cXkt1arsL0%3D
-
Zigmantas D, Hiller RG, Sharples FP, Frank HA, Sundström V, Polivka T (2004) Effect of a conjugated carbonyl group on the photophysical properties of carotenoids. Phys Chem Chem Phys 6:3009-3016
-
(2004)
Phys Chem Chem Phys
, vol.6
, pp. 3009-3016
-
-
Zigmantas, D.1
Hiller, R.G.2
Sharples, F.P.3
Frank, H.A.4
Sundström, V.5
Polivka, T.6
|