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Volumn 31, Issue 13, 2015, Pages 2205-2207

Oasis: Online analysis of small RNA deep sequencing data

Author keywords

[No Author keywords available]

Indexed keywords

MICRORNA;

EID: 84930278000     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btv113     Document Type: Article
Times cited : (49)

References (13)
  • 1
    • 0035478854 scopus 로고    scopus 로고
    • Random forests
    • Breiman,L. (2001) Random Forests. Mach. Learn., 45, 5-32.
    • (2001) Mach. Learn. , vol.45 , pp. 5-32
    • Breiman, L.1
  • 2
    • 84876515907 scopus 로고    scopus 로고
    • STRING v9. 1: Protein-protein interaction networks with increased coverage and integration
    • Franceschini,A. et al. (2013) STRING v9.1: protein-protein interaction networks, with increased coverage and integration. Nucleic Acids Res., 41, D808-D815.
    • (2013) Nucleic Acids Res. , vol.41 , pp. D808-D815
    • Franceschini, A.1
  • 3
    • 41349115432 scopus 로고    scopus 로고
    • The DAVID Gene Functional Classification Tool: A novel biological module-centric algorithm to functionally analyze large gene lists
    • Huang,D.W. et al. (2007) The DAVID Gene Functional Classification Tool: A novel biological module-centric algorithm to functionally analyze large gene lists. Genome Biol., 8, R183.
    • (2007) Genome Biol. , vol.8 , pp. R183
    • Huang, D.W.1
  • 4
    • 84911390062 scopus 로고    scopus 로고
    • MAGI: A Node. Js WEB service for fast microRNA-Seq analysis in a GPU infrastructure
    • Kim,J. et al. (2014) MAGI: A Node.js web service for fast microRNA-Seq analysis in a GPU infrastructure. Bioinformatics, 30, 2826-2827.
    • (2014) Bioinformatics , vol.30 , pp. 2826-2827
    • Kim, J.1
  • 5
    • 84891781052 scopus 로고    scopus 로고
    • STITCH 4: Integration of protein-chemical interactions with user data
    • Kuhn,M. et al. (2014) STITCH 4: Integration of protein-chemical interactions with user data. Nucleic Acids Res., 42, D401-D407.
    • (2014) Nucleic Acids Res. , vol.42 , pp. D401-D407
    • Kuhn, M.1
  • 6
    • 84924629414 scopus 로고    scopus 로고
    • Moderated estimation of fold change and dispersion for RNA-Seq data with DESeq2
    • Love,M. et al. (2014) Moderated estimation of fold change and dispersion for RNA-Seq data with DESeq2. Genome Biol. 15, 550.
    • (2014) Genome Biol. , vol.15 , pp. 550
    • Love, M.1
  • 7
    • 84893284042 scopus 로고    scopus 로고
    • ISRNA: An integrative online toolkit for short reads from high-throughput sequencing data
    • Luo,G.-Z. et al. (2014) ISRNA: an integrative online toolkit for short reads from high-throughput sequencing data. Bioinformatics, 30, 434-436.
    • (2014) Bioinformatics , vol.30 , pp. 434-436
    • Luo, G.-Z.1
  • 8
    • 79959923522 scopus 로고    scopus 로고
    • G:Profiler-A WEB server for functional interpretation of gene lists (2011 update)
    • Reimand,J. et al. (2011) G:Profiler-A web server for functional interpretation of gene lists (2011 update). Nucleic Acids Res., 39, W307-W315.
    • (2011) Nucleic Acids Res. , vol.39 , pp. W307-W315
    • Reimand, J.1
  • 9
    • 84902553235 scopus 로고    scopus 로고
    • CAP-miRSeq: A comprehensive analysis pipeline for microRNA sequencing data
    • Sun,Z. et al. (2014) CAP-miRSeq: A comprehensive analysis pipeline for microRNA sequencing data. BMC Genomics, 15, 423.
    • (2014) BMC Genomics , vol.15 , pp. 423
    • Sun, Z.1
  • 10
    • 84920509010 scopus 로고    scopus 로고
    • Circulating MicroRNA biomarker studies: Pitfalls and potential solutions
    • Witwer,K.W. (2014) Circulating MicroRNA biomarker studies: pitfalls and potential solutions. Clin. Chem., 61, 56-63.
    • (2014) Clin. Chem. , vol.61 , pp. 56-63
    • Witwer, K.W.1
  • 11
    • 84880902774 scopus 로고    scopus 로고
    • MirTools 2. 0 for non-coding RNA discovery profiling, and functional annotation based on high-throughput sequencing
    • Wu,J. et al. (2013) mirTools 2.0 for non-coding RNA discovery, profiling, and functional annotation based on high-throughput sequencing. RNA Biol., 10, 1087-1092.
    • (2013) RNA Biol. , vol.10 , pp. 1087-1092
    • Wu, J.1
  • 12
    • 84864153006 scopus 로고    scopus 로고
    • CPSS: A computational platform for the analysis of small RNA deep sequencing data
    • Zhang,Y. et al. (2012) CPSS: A computational platform for the analysis of small RNA deep sequencing data. Bioinformatics, 28, 1925-1927.
    • (2012) Bioinformatics , vol.28 , pp. 1925-1927
    • Zhang, Y.1
  • 13
    • 84883575046 scopus 로고    scopus 로고
    • GeneMANIA prediction server 2013 update
    • Zuberi,K. et al. (2013) GeneMANIA prediction server 2013 update. Nucleic Acids Res., 41, W115-W122.
    • (2013) Nucleic Acids Res. , vol.41 , pp. W115-W122
    • Zuberi, K.1


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