메뉴 건너뛰기




Volumn 65, Issue 5, 2015, Pages 1-33

The VGAM package for capture-recapture data using the conditional likelihood

Author keywords

Closed population size estimation; Conditional likelihood; Mark capture recapture; Vector generalized additive model; VGAM

Indexed keywords


EID: 84930148469     PISSN: 15487660     EISSN: None     Source Type: Journal    
DOI: 10.18637/jss.v065.i05     Document Type: Article
Times cited : (44)

References (49)
  • 1
    • 0025197954 scopus 로고
    • Logistic Regression in Capture-Recapture Models
    • Alho JM (1990). Logistic Regression in Capture-Recapture Models. Biometrics, 54(3), 623-635.
    • (1990) Biometrics , vol.54 , Issue.3 , pp. 623-635
    • Alho, J.M.1
  • 3
    • 34247640385 scopus 로고    scopus 로고
    • Rcapture: Loglinear Models for Capture-Recapture in R
    • Baillargeon S, Rivest LP (2007). Rcapture: Loglinear Models for Capture-Recapture in R. Journal of Statistical Software, 19(5), 1-31. URL http://www.jstatsoft.org/v19/i05/.
    • (2007) Journal of Statistical Software , vol.19 , Issue.5 , pp. 1-31
    • Baillargeon, S.1    Rivest, L.P.2
  • 4
    • 85007569011 scopus 로고    scopus 로고
    • Rcapture: Loglinear Models for Capture-Recapture Experiments
    • Baillargeon S, Rivest LP (2014). Rcapture: Loglinear Models for Capture-Recapture Experiments. R package version 1.4-2, URL http://CRAN.R-project.org/package=Rcapture.
    • (2014) R Package Version 1.4-2
    • Baillargeon, S.1    Rivest, L.P.2
  • 9
    • 0024474469 scopus 로고
    • Log-Linear Models for Capture-Recapture
    • Cormack RM (1989). Log-Linear Models for Capture-Recapture. Biometrics, 45(2), 395-413.
    • (1989) Biometrics , vol.45 , Issue.2 , pp. 395-413
    • Cormack, R.M.1
  • 10
    • 1842360309 scopus 로고
    • Blackwell Scientific Publications, Boston
    • Crawley MJ (1993). GLIM for Ecologists. Blackwell Scientific Publications, Boston.
    • (1993) GLIM for Ecologists
    • Crawley, M.J.1
  • 11
    • 33646928423 scopus 로고    scopus 로고
    • Non-parametric Estimation of Natural Selection on a Quantitative Trait Using Mark-Recapture Data
    • Gimenez O, Covas R, Brown CR, Anderson MD, Brown MB, Lenormand T (2006). Non-parametric Estimation of Natural Selection on a Quantitative Trait Using Mark-Recapture Data. Evolution, 60(3), 460-466.
    • (2006) Evolution , vol.60 , Issue.3 , pp. 460-466
    • Gimenez, O.1    Covas, R.2    Brown, C.R.3    Erson, M.D.4    Brown, M.B.5    Lenormand, T.6
  • 15
    • 0000463075 scopus 로고
    • On the Statistical Analysis of Capture Experiments
    • Huggins RM (1989). On the Statistical Analysis of Capture Experiments. Biometrika, 76(1), 133-140.
    • (1989) Biometrika , vol.76 , Issue.1 , pp. 133-140
    • Huggins, R.M.1
  • 16
    • 0025919476 scopus 로고
    • Some Practical Aspects of a Conditional Likelihood Approach to Capture Experiments
    • Huggins RM (1991). Some Practical Aspects of a Conditional Likelihood Approach to Capture Experiments. Biometrics, 47(2), 725-732.
    • (1991) Biometrics , vol.47 , Issue.2 , pp. 725-732
    • Huggins, R.M.1
  • 17
    • 34548130041 scopus 로고    scopus 로고
    • Non-Parametric Estimation of Population Size from Capture-Recapture Data when the Capture Probability Depends on a Covariate
    • Huggins RM, Hwang WH (2007). Non-Parametric Estimation of Population Size from Capture-Recapture Data when the Capture Probability Depends on a Covariate. Journal of the Royal Statistical Society C, 56(4), 429-443.
    • (2007) Journal of the Royal Statistical Society C , vol.56 , Issue.4 , pp. 429-443
    • Huggins, R.M.1    Hwang, W.H.2
  • 18
    • 82055200221 scopus 로고    scopus 로고
    • A Review of the Use of Conditional Likelihood in Capture-Recapture Experiments
    • Huggins RM, Hwang WH (2011). A Review of the Use of Conditional Likelihood in Capture-Recapture Experiments. International Statistical Review, 79(3), 385-400.
    • (2011) International Statistical Review , vol.79 , Issue.3 , pp. 385-400
    • Huggins, R.M.1    Hwang, W.H.2
  • 20
    • 34250840148 scopus 로고    scopus 로고
    • Application of Semiparametric Regression Models in the Analysis of Capture-Recapture Experiments
    • Hwang WH, Huggins RM (2007). Application of Semiparametric Regression Models in the Analysis of Capture-Recapture Experiments. Australian & New Zealand Journal of Statistics, 49(2), 191-202.
    • (2007) Australian & New Zealand Journal of Statistics , vol.49 , Issue.2 , pp. 191-202
    • Hwang, W.H.1    Huggins, R.M.2
  • 21
    • 84868613308 scopus 로고    scopus 로고
    • A Semiparametric Model for a Functional Behavioural Response to Capture in Capture-Recapture Experiments
    • Hwang WH, Huggins RM (2011). A Semiparametric Model for a Functional Behavioural Response to Capture in Capture-Recapture Experiments. Australian & New Zealand Journal of Statistics, 53(4), 403-421.
    • (2011) Australian & New Zealand Journal of Statistics , vol.53 , Issue.4 , pp. 403-421
    • Hwang, W.H.1    Huggins, R.M.2
  • 22
    • 84887397817 scopus 로고    scopus 로고
    • AFSC Processed Report 2013-01, Alaska Fisheries Science Center, NOAA, National Marine Fisheries Service, Seattle
    • Laake JL (2013). RMark: An R Interface for Analysis of Capture-Recapture Data with MARK. AFSC Processed Report 2013-01, Alaska Fisheries Science Center, NOAA, National Marine Fisheries Service, Seattle. URL http://www.afsc.noaa.gov/Publications/ProcRpt/PR2013-01.pdf.
    • (2013) Rmark: An R Interface for Analysis of Capture-Recapture Data with MARK
    • Laake, J.L.1
  • 23
    • 0026490966 scopus 로고
    • Modelling Survival and Testing Biological Hypothesis Using Marked Animals: Unified Approach with Case Studies
    • Lebreton JD, Burnham KP, Clobert J, Anderson DR (1992). Modelling Survival and Testing Biological Hypothesis Using Marked Animals: Unified Approach with Case Studies. Biometrics, 62(1), 67-118.
    • (1992) Biometrics , vol.62 , Issue.1 , pp. 67-118
    • Lebreton, J.D.1    Burnham, K.P.2    Clobert, J.3    Erson, D.R.4
  • 27
    • 84890859365 scopus 로고    scopus 로고
    • Mra: Analysis of Mark-Recapture Data
    • McDonald TL (2012). mra: Analysis of Mark-Recapture Data. R package version 2.13, URL http://CRAN.R-project.org/package=mra.
    • (2012) R Package Version 2.13
    • McDonald, T.L.1
  • 29
    • 0001722949 scopus 로고
    • Statistical Inference From Capture Data on Closed Animal Populations
    • Otis DL, Burnham KP, White GC, Anderson DR (1978). Statistical Inference From Capture Data on Closed Animal Populations. Wildlife Monographs, 62, 3-135.
    • (1978) Wildlife Monographs , vol.62 , pp. 3-135
    • Otis, D.L.1    Burnham, K.P.2    White, G.C.3    Erson, D.R.4
  • 30
    • 33746329028 scopus 로고
    • Maximum Likelihood Estimation for Generalized Power Series Distributions and its Application to a Truncated Binomial Distribution
    • Patil GP (1962). Maximum Likelihood Estimation for Generalized Power Series Distributions and its Application to a Truncated Binomial Distribution. Biometrika, 49(1), 227-237.
    • (1962) Biometrika , vol.49 , Issue.1 , pp. 227-237
    • Patil, G.P.1
  • 31
    • 84950425550 scopus 로고
    • Modeling Capture, Recapture, and Removal Statistics for Estimation of Demographic Parameters for Fish and Wildlife Populations: Past, Present and Future
    • Pollock KH (1991). Modeling Capture, Recapture, and Removal Statistics for Estimation of Demographic Parameters for Fish and Wildlife Populations: Past, Present and Future. Journal of the American Statistical Association, 86(413), 225-238.
    • (1991) Journal of the American Statistical Association , vol.86 , Issue.413 , pp. 225-238
    • Pollock, K.H.1
  • 32
    • 0036146418 scopus 로고    scopus 로고
    • The Use of Auxiliary Variables in Capture-Recapture Modelling: An Overview
    • Pollock KH (2002). The Use of Auxiliary Variables in Capture-Recapture Modelling: An Overview. Journal of Applied Statistics, 29(1-4), 85-102.
    • (2002) Journal of Applied Statistics , vol.29 , Issue.1-4 , pp. 85-102
    • Pollock, K.H.1
  • 33
    • 0021596787 scopus 로고
    • The Use of Auxiliary Variables in Capture-Recapture and Removal Experiments
    • Pollock KH, Hines J, Nichols J (1984). The Use of Auxiliary Variables in Capture-Recapture and Removal Experiments. Biometrics, 40(2), 329-340.
    • (1984) Biometrics , vol.40 , Issue.2 , pp. 329-340
    • Pollock, K.H.1    Hines, J.2    Nichols, J.3
  • 34
    • 84930161442 scopus 로고    scopus 로고
    • R: A Language and Environment for Statistical Computing
    • Vienna, Austria
    • R Core Team (2015). R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. URL http://www.R-project.org.
    • (2015) R Foundation for Statistical Computing
    • Core Team, R.1
  • 36
    • 0024218507 scopus 로고
    • Estimating the Form of Natural Selection on a Quantitative Trait
    • Schluter D (1988). Estimating the Form of Natural Selection on a Quantitative Trait. Evolution, 42(5), 849-861.
    • (1988) Evolution , vol.42 , Issue.5 , pp. 849-861
    • Schluter, D.1
  • 37
    • 80053239186 scopus 로고    scopus 로고
    • A Robust P-Spline Approach to Closed Population Capture-Recapture Models with Time Dependence and Heterogeneity
    • Stoklosa J, Huggins RM (2012). A Robust P-Spline Approach to Closed Population Capture-Recapture Models with Time Dependence and Heterogeneity. Computational Statistics & Data Analysis, 56(2), 408-417.
    • (2012) Computational Statistics & Data Analysis , vol.56 , Issue.2 , pp. 408-417
    • Stoklosa, J.1    Huggins, R.M.2
  • 38
    • 83655163982 scopus 로고    scopus 로고
    • Heterogeneous Capture-Recapture Models with Covariates: A Partial Likelihood Approach for Closed Populations
    • Stoklosa J, Hwang WH, Wu SH, Huggins RM (2011). Heterogeneous Capture-Recapture Models with Covariates: A Partial Likelihood Approach for Closed Populations. Biometrics, 67(4), 1659-1665.
    • (2011) Biometrics , vol.67 , Issue.4 , pp. 1659-1665
    • Stoklosa, J.1    Hwang, W.H.2    Wu, S.H.3    Huggins, R.M.4
  • 40
    • 33644867394 scopus 로고    scopus 로고
    • Modeling Animals' Behavioral Response by Markov Chain Models for Capture-Recapture Experiments
    • Yang HC, Chao A (2005). Modeling Animals' Behavioral Response by Markov Chain Models for Capture-Recapture Experiments. Biometrics, 61(4), 1010-1017.
    • (2005) Biometrics , vol.61 , Issue.4 , pp. 1010-1017
    • Yang, H.C.1    Chao, A.2
  • 41
    • 70450223382 scopus 로고    scopus 로고
    • The VGAM Package
    • Yee TW (2008). The VGAM Package. R News, 8(2), 28-39.
    • (2008) R News , vol.8 , Issue.2 , pp. 28-39
    • Yee, T.W.1
  • 42
    • 77949335209 scopus 로고    scopus 로고
    • The VGAM Package for Categorical Data Analysis
    • Yee TW (2010). The VGAM Package for Categorical Data Analysis. Journal of Statistical Software, 32(10), 1-34. URL http://www.jstatsoft.org/v32/i10/.
    • (2010) Journal of Statistical Software , vol.32 , Issue.10 , pp. 1-34
    • Yee, T.W.1
  • 43
    • 84930171928 scopus 로고    scopus 로고
    • VGAM: Vector Generalized Linear and Additive Models
    • Yee TW (2014). VGAM: Vector Generalized Linear and Additive Models. R package version 0.9-6, URL http://CRAN.R-project.org/package=VGAM.
    • (2014) R Package Version 0.9-6
    • Yee, T.W.1
  • 45
    • 84993729357 scopus 로고    scopus 로고
    • Reduced-Rank Vector Generalized Linear Models
    • Yee TW, Hastie TJ (2003). Reduced-Rank Vector Generalized Linear Models. Statistical Modelling, 3(1), 15-41.
    • (2003) Statistical Modelling , vol.3 , Issue.1 , pp. 15-41
    • Yee, T.W.1    Hastie, T.J.2
  • 46
    • 84986799949 scopus 로고
    • Generalized Additive Models in Plant Ecology
    • Yee TW, Mitchell ND (1991). Generalized Additive Models in Plant Ecology. Journal of Vegetation Science, 2(5), 587-602.
    • (1991) Journal of Vegetation Science , vol.2 , Issue.5 , pp. 587-602
    • Yee, T.W.1    Mitchell, N.D.2
  • 47
    • 3242775321 scopus 로고
    • Technical Report STAT04, Department of Statistics, University of Auckland, Auckland, New Zealand
    • Yee TW, Wild CJ (1994). Vector Generalized Additive Models. Technical Report STAT04, Department of Statistics, University of Auckland, Auckland, New Zealand.
    • (1994) Vector Generalized Additive Models
    • Yee, T.W.1    Wild, C.J.2
  • 49
    • 8344245475 scopus 로고    scopus 로고
    • Semiparametric Models for Capture-Recapture Studies with Covariates
    • Zwane EN, van der Heijden PGM (2004). Semiparametric Models for Capture-Recapture Studies with Covariates. Computational Statistics & Data Analysis, 47(4), 729-743.
    • (2004) Computational Statistics & Data Analysis , vol.47 , Issue.4 , pp. 729-743
    • Zwane, E.N.1    Van Der Heijden, P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.