The order halanaerobiales, and the families halanaerobiaceae and halobacteroidaceae

The Prokaryotes: Firmicutes and Tenericutes

Volumn , Issue , 2013, Pages 153-177

  Oren, Aharon ^a  

^a HEBREW UNIVERSITY OF JERUSALEM   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84929688662     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-3-642-30120-9_218     Document Type: Chapter

References (113)

1. Baumgartner JG (1937) The salt limits and thermal stability of a new species of anaerobic halophile. Food Res 2:321-329
2. Bhupathiraju VK, Sharma PK, McInerney MJ, Knapp RM, Fowler K, Jenkins W (1991) Isolation and characterization of novel halophilic anaerobic bacteria from oil field brines. In: Donaldson EC (ed) Microbial enhancement of oil recovery-recent advances. Elsevier Scientific Publishers, Amsterdam, pp 132-143
3. Bhupathiraju VK, McInerney MJ, Knapp RM (1993) Pretest studies for a microbially enhanced oil recovery field pilot in a hypersaline oil reservoir. Geomicrobiol J 11:19-34
4. Bhupathiraju VK, Oren A, Sharma PK, Tanner RS, Woese CR, McInerney MJ (1994) Haloanaerobium salsugo sp. nov., a moderately halophilic, anaerobic bacterium from a subterranean brine. Int J Syst Bacteriol 44:565-572
5. Bhupathiraju VK, McInerney MJ, Woese CR, Tanner RS (1999) Haloanaerobium kushneri sp. nov., an obligately halophilic, anaerobic bacterium from an oil brine. Int J Syst Bacteriol 49:953-960
6. Bolobova AV, Simankova MC, Markovich NA (1992) Cellulase complex of a new halophilic bacterium Halocella cellulolytica. Mikrobiologiya 61:557-562
7. Brown SD, Begemann MB, Mormile MR, Wall JD, Han CS, Goodwin LA, Pitluck S, Land ML, Hauser LJ, Elias DA (2011) Complete genome sequence of the haloalkaliphilic, hydrogen-producing bacterium Halanaerobium hydrogenoformans. J Bacteriol 193:3682-3683
8. Cayol JL, Ollivier B, Lawson Anani Soh A, Fardeau M-L, Ageron E, Grimont PAD, Prensier G, Guezennec J, Magot M, Garcia J-L (1994a) Haloincola saccharolytica subsp. senegalensis subsp. nov., isolated from the sediments of a hypersaline lake, and emended description of Haloincola saccharolytica. Int J Syst Bacteriol 44:805-811
9. Cayol J-L, Ollivier B, Patel BKC, Prensier G, Guezennec J, Garcia J-L (1994b) Isolation and characterization of Halothermothrix orenii gen. nov., sp. nov., a halophilic, thermophilic, fermentative, strictly anaerobic bacterium. Int J Syst Bacteriol 44:534-540
10. Cayol J-L, Ollivier B, Patel BKC, Ageron E, Grimont PAD, Prensier G, Garcia J-L (1995) Haloanaerobium lacusroseus sp. nov., an extremely halophilic fermen tative bacterium from the sediments of a hypersaline lake. Int J Syst Bacteriol 45:790-797
11. Cayol J-L, Ollivier B, Garcia J-L (2009) Genus III. Halothermothrix Cayol, Ollivier, Patel, Prensier, Guezennec and Garcia 1994a, 538VP. In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, pp 1202-1206
12. Chua TK, Bujnicki JM, Tan T-C, Huynh F, Patel BK, Sivaraman J (2008) The structure of sucrose phosphate synthase from Halothermothrix orenii reveals its mechanism of action and binding mode. Plant Cell 20:1059-1072
13. Chua TK, Seetharaman J, Kasprzak JM, Ng C, Patel BKC, Love C, Bujnicki JM, Sivaraman J (2010) Crystal structure of a fructokinase homolog from Halothermothrix orenii. J Struct Biol 171:397-401
14. Detkova EN, Boltyanskaya YV (2006) Relationships between the osmoadaptation strategy, amino acid composition of bulk protein, and properties of certain enzymes of haloalkaliphilic bacteria. Mikrobiologiya 75:259-265
15. Detkova EN, Pusheva MA (2006) Energy metabolism in halophilic and alkaliphilic acetogenic bacteria. Mikrobiologiya 75:1-11
16. Eder W, Jahnke LL, Schmidt M, Huber R (2001) Microbial diversity of the brine-seawater interface of the Kebrit Deep, Red Sea, studied via 16S rRNA gene sequences and cultivation methods. Appl Environ Microbiol 67:3077-3085
17. Elevi Bardavid R, Oren A (2012) The amino acid composition of proteins from anaerobic halophilic bacteria of the order Halanaerobiales. Extremophiles 16:567-572
18. Gales G, Chehider N, Joulian C, Battaglia-Brunet F, Cayol J-L, Postec A, Borgomano J, Neria-Gonzalez I, Lomans BP, Ollivier B, Alazard D (2011) Characterization of Halanaerocella petrolearia gen. nov., sp. nov., a new anaerobic moderately halophilic fermentative bacterium isolated from a deep subsurface hypersaline oil reservoir. Extremophiles 15:565-571
19. Hedi A, Fardeau M-L, Sadfi N, Boudabous A, Ollivier B, Cayol J-L (2009) Characterization of Haloanaerobaculum tunisiense gen. nov., sp. nov., a new halophilic fermentative, strictly anaerobic bacterium isolated from a hypersaline lake in Tunisia. Extremophiles 13:313-319
20. Huynh F, Tan T-C, Swaminathan K, Patel BKC (2005) Expression, purification and preliminary crystallographic analysis of sucrose phosphate synthase (SPS) from Halothermothrix orenii. Acta Crystallogr F Struct Biol Cryst Commun 61:116-117
21. Ivanova N, Sikorski J, Chertkov O, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng J-F, Tapia R, Han C, Goodwin L, Pitluck S, Huntemann M, Liolios K, Pagani I, Mavromatis K, Ovchinikova G, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Brambilla E, Palaniappan K, Kannan KP, Rohde M, Tindall BJ, Göker M, Detter JC, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk H-P, Lapidus A (2011) Complete genome sequence of Halanaerobium praevalens type strain (GSLT). Stand Genom Sci 4:312-321
22. Kapdan IK, Boylan B (2009) Batch treatment of saline wastewater by Halanaerobium lacusrosei in an anaerobic packed bed reactor. J Chem Technol Biotechnol 84:34-38
23. Kapdan IK, Erten B (2007) Anaerobic treatment of saline wastewater by Halanaerobium lacusrosei. Process Biochem 42:449-453
24. Kevbrin VV, Zavarzin GA (1992a) Methanethiol utilization and sulfur reduction by anaerobic halophilic saccharolytic bacteria. Curr Microbiol 24:247-250
25. Kevbrin VV, Zavarzin GA (1992b) Effect of sulfur compounds on the growth of the halophilic homoacetogenic bacterium Acetohalobium arabaticum. Mikrobiologiya 61:563-567
26. Kevbrin VV, Zhilina TN, Zavarzin GA (1995) Physiology of the halophilic homoacetic bacterium Acetohalobium arabaticum. Mikrobiologiya 64:134-138
27. Kivistö AT, Karp MT (2011) Halophilic anaerobic fermentative bacteria. J Biotechnol 152:114-124
28. Kivistö AT, Santala V, Karp MT (2010) Hydrogen production from glycerol using halophilic fermentative bacteria. Bioresour Technol 101:8671-8677
29. Kobayashi T, Kimura B, Fujii T (2000a) Haloanaerobium fermentans sp. nov., a strictly anaerobic, fermentative halophile isolated from fermented puffer fish ovaries. Int J Syst Evol Microbiol 50:1621-1627
30. Kobayashi T, Kimura B, Fujii T (2000b) Strictly anaerobic halophiles isolated from canned Swedish fermented herrings (Surströmming). Int J Food Microbiol 54:81-89
31. Kori LD, Hofmann A, Patel BKC (2012) Expression, purification, crystallization and preliminary X-ray diffraction analysis of a ribokinase from the thermohalophile Halothermothrix orenii. Acta Cryst F68:240-241
32. Li N, Patel BKC, Mijts BN, Swaminathan K (2002) Crystallization of an a-amy-lase, AmyA, from the thermophilic halophile Halothermothrix orenii. Acta Cryst D58:2125-2126
33. Liaw HJ, Mah RA (1992) Isolation and characterization of Haloanaerobacter chitinovorans gen. nov., sp. nov., a halophilic, anaerobic, chitinolytic bacterium from a solar saltern. Appl Environ Microbiol 58:260-266
34. Lowe SE, Jain MK, Zeikus JG (1993) Biology, ecology, and biotechnological applications of anaerobic bacteria adapted to environmental stresses in temperature, pH, salinity, or substrates. Microbiol Rev 57:451-509
35. Mavromatis K, Ivanova N, Anderson I, Lykidis A, Hooper SD, Sun H, Kunin V, Lapidus A, Hugenholtz P, Patel B, Kyrpides NC (2009) Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii. PLoS One 4:e4192
36. Mesbah NM (2009) Genus III. Halanaerobacter Liaw and Mah 1996, 362VP (Effective publication: Liaw and Mah 1992, 265). In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, pp 1212-1215
37. Mezghani M, Alazard D, Karray F, Cayol JL, Joseph M, Postec A, Fardeau ML, Tholozan JL, Sayadi S (2012) Halanaerobacter jeridensis sp. nov., a novel fermentative, anaerobic bacterium from a hypersaline lake in Tunisia. Int J Syst Evol Microbiol 62:1970-1973
38. Mijts BM, Patel BKC (2001) Random sequence analysis of genomic DNA of an anaerobic, thermophilic, halophilic bacterium, Halothermothrix orenii. Extremophiles 5:61-69
39. Mijts BM, Patel BKC (2002) Cloning, sequencing and expression of an a-amylase gene, amyA, from the thermophilic halophile Halothermothrix orenii and purification and biochemical characterization of the recombinant enzyme. Microbiology 148:2343-2349
40. Mouné S, Manac'h M, Hirschler A, Caumette P, Willison JC, Matheron R (1999) Haloanaerobacter salinarius sp. nov., a novel halophilic fermentative bacterium that reduces glycine-betaine to trimethylamine with hydrogen or serine as electron donors; emendation of the genus Haloanaerobacter. Int J Syst Bacteriol 49:103-112
41. Mouné S, Eatock C, Matheron R, Willison JC, Hirschler A, Herbert R, Caumette P (2000) Orenia salinaria sp. nov., a fermentative bacterium isolated from anaerobic sediments of Mediterranean salterns. Int J Syst Evol Microbiol 50:721-729
42. Mouné S, Caumette P, Matheron R, Willison JC (2003) Molecular sequence analysis of prokaryotic diversity in the anoxic sediments underlying cyanobacterial mats of two hypersaline ponds in Mediterranean salterns. FEMS Microbiol Ecol 44:117-130
43. Ollivier B, Caumette P, Garcia J-L, Mah RA (1994) Anaerobic bacteria from hypersaline environments. Microbiol Rev 58:27-38
44. Oren A (1983) Clostridium lortetii sp. nov., a halophilic obligatory anaerobic bacterium producing endosporeswith attached gas vacuoles. Arch Microbiol 136:42-48
45. Oren A (1986a) The ecology and taxonomy of anaerobic halophilic eubacteria. FEMS Microbiol Rev 39:23-29
46. Oren A (1986b) Intracellular salt concentrations of the anaerobic halophilic eubacteria Haloanaerobium praevalens and Halobacteroides halobius. Can J Microbiol 32:4-9
47. Oren A (1987) A procedure for the selective enrichment of Halobacteroides halobius and related bacteria from anaerobic hypersaline sediments. FEMS Microbiol Lett 42:201-204
48. Oren A (1988) Anaerobic degradation of organic compounds at high salt concentrations. Antonie Van Leeuwenhoek 54:267-277
49. Oren A (1989) Photosynthetic and heterotrophic benthic bacterial communities of a hypersaline sulfur spring on the shore of the Dead Sea. In: Cohen Y, Rosenberg E (eds) Microbial mats. Physiological ecology of benthic microbial communities. American Society for Microbiology, Washington, DC, pp 64-76
50. Oren A (1990) Anaerobic degradation of organic compounds in hypersaline environments: possibilities and limitations. In: Wise DL (ed) Bioprocessing and biotreatment of coal. Marcel Dekker, New York, pp 155-175
51. Oren A (1993a) The genera Haloanaerobium, Halobacteroides, and Sporohalobacter. In: Balows A, Trüper HG, Dworkin M, Harder W, Schleifer K-H (eds) The prokaryotes. A handbook on the biology of bacteria: ecophysiology, isolation, identification, applications, vol II, 2nd edn. Springer, New York, pp 1893-1900
52. Oren A (1993b) Anaerobic heterotrophic bacteria growing at extremely high salt concentrations. In: Guerrero R, Pedró s-Alió C (eds) Trends in microbial ecology. Spanish Society for Microbiology, Madrid, pp 539-542
53. Oren A (2000) Change of the names Haloanaerobiales, Haloanaerobiaceae and Haloanaerobium to Halanaerobiales, Halanaerobiaceae and Halanaerobium, respectively, and further nomenclatural changes within the order Halanaerobiales. Int J Syst Evol Microbiol 50:2229-2230
54. Oren A (2006) The order Haloanaerobiales. In: Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E (eds) The prokaryotes. A handbook on the biology of bacteria: ecophysiology and biochemistry, vol 4. Springer, New York, pp 804-817
55. Oren A (2009a) Order II. Halanaerobiales corrig. Rainey and Zhilina 1995a, 879VP (Effective publication: Rainey, Zhilina, Boulygina, Stackebrandt, Tourova and Zavarzin 199b, 193). In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, pp 1191-1194
56. Oren A (2009b) Family I. Halanaerobiaceae corrig. Oren, Paster and Woese 1984b, 503VP (Effective publication: Oren, Paster and Woese, 1984a, 79). In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, pp 1195-1196
57. Oren A (2009c) Genus I. Halanaerobium corrig. Zeikus, Hegge, Thompson, Phelps and Langworthy 1984, 503VP (Effective publication: Zeikus, Hegge, Thompson, Phelps and Langworthy 1983, 232). In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, pp 1196-1201
58. Oren A (2009d) Family II. Halobacteroidaceae Zhilina and Rainey 1995, 879VP (Effective publication: Rainey, Zhilina, Boulygina, Stackebrandt, Tourova and Zavarzin 1995a, 193). In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, pp 1207-1208
59. Oren A (2009e) Genus I. Halobacteroides Oren, Weisburg, Kessel and Woese 1984a, 355VP (Effective publication: Oren, Weisburg, Kessel and Woese 1984b, 68). In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, pp 1208-1209
60. Oren A (2009f) Genus VIII. Sporohalobacter Oren, Pohla and Stackebrandt 1988, 136VP (Effective publication: Oren, Pohla and Stackebrandt 1987, 245). In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol3, 2nd edn, The Firmicutes. Springer, Dordrecht, pp 1222-1224
61. Oren A, Gurevich P (1993) The fatty acid synthetase complex of Haloanaerobium praevalens is not inhibited by salt. FEMS Microbiol Lett 108:287-290
62. Oren A, Paster BJ, Woese CR (1984a) Haloanaerobiaceae: a new family of moderately halophilic, obligatory anaerobic bacteria. Syst Appl Microbiol 5:71-80
63. Oren A, Weisburg WG, Kessel M, Woese CR(1984b) Halobacteroides halobius gen. nov., sp. nov., a moderately halophilic anaerobic bacterium from the bottom sediments of the Dead Sea. Syst Appl Microbiol 5:58-70
64. Oren A, Pohla H, Stackebrandt E (1987) Transfer of Clostridium lortetii to a new genus Sporohalobacter gen. nov. as Sporohalobacter lortetii comb. nov., and description of Sporohalobacter marismortui sp. nov. Syst Appl Microbiol 9:239-246
65. Oren A, Gofshtein-Gandman LV, Keynan A (1989) Hydrolysis of N-benzoyl-D-arginine-p-nitroanilide by members of the Haloanaerobiaceae: additional evidence that Haloanaerobium praevalens is related to endospore-forming bacteria. FEMS Microbiol Lett 58:5-10
66. Oren A, Gurevich P, Henis Y (1991) Reduction of nitrosubstituted aromatic compounds by the halophilic eubacteria Haloanaerobium praevalens and Sporohalobacter marismortui. Appl Environ Microbiol 57:3367-3370
67. Oren A, Gurevich P, Azachi M, Henis Y (1992) Microbial degradation of pollutants at high salt concentrations. Biodegradation 3:387-398
68. Oren A, Heldal M, Norland S (1997) X-ray microanalysis of intracellular ions in the anaerobic halophilic eubacterium Haloanaerobium praevalens. Can J Microbiol 43:588-592
69. Oren A, Oremland RS, Stolz JF (2009) Genus VII. Selenihalanaerobacter Switzer Blum, Stolz, Oren and Oremland 2001, 1229VP (Effective publication: Switzer Blum, Stolz, Oren and Oremland 2001, 217). In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, p 1121
70. Patel BKC, Andrews KT, Ollivier B, Mah RA, Garcia J-L (1995) Reevaluating the classification of Halobacteroides and Haloanaerobacter species based on sequence comparisons of the 16S ribosomal RNA gene. FEMS Microbiol Lett 134:115-119
71. Pusheva MA, Detkova EN (1996) Bioenergetic aspects of acetogenesis on various substrates by the extremely halophilic acetogenic bacterium Acetohalobium arabaticum. Mikrobiologiya 65:516-520
72. Pusheva MA, Detkova EN, Bolotina NP, Zhilina TN (1992) Properties of periplasmatic hydrogenase of Acetohalobium arabaticum, an extremely halophilic homoacetogenic bacterium. Mikrobiologiya 61:653-657
73. Rainey FA (2009) Genus VI. Orenia Rainey, Zhilina, Boulygina and Zavarzin 1995b, 880VP (Effective publication: Rainey, Zhilina, Boulygina, Stackebrandt, Tourova and Zavarzin 1995a, 197). In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, pp 1217-1220
74. Rainey FA, Zhilina TN, Boulygina ES, Stackebrandt E, Tourova TP, Zavarzin GA (1995) The taxonomic status of the fermentative halophilic anaerobic bacteria: description of Halobacteriales ord. nov., Halobacteroidaceae fam. nov., Orenia gen. nov. and further taxonomic rearrangements at the genus and species level. Anaerobe 1:185-199
75. Ravot G, Magot M, Ollivier B, Patel BKC, Ageron E, Grimont PAD, Thomas P, Garcia J-L (1997) Haloanaerobium congolense sp. nov., an anaerobic, moderately halophilic, thiosulfate-and sulfur-reducing bacterium from an African oil field. FEMS Microbiol Lett 147:81-88
76. Ravot G, Casalot L, Ollivier B, Loison G, Magot M (2005) rdlA, a new gene encoding a rhodanese-like protein in Halanaerobium congolense and other thiosulfate-reducing anaerobes. Res Microbiol 156:1031-1038
77. Rengpipat S, Langworthy TA, Zeikus JG (1988a) Halobacteroides acetoethylicus sp. nov., a new obligately anaerobic halophile isolated from deep subsurface hypersaline environments. Syst Appl Microbiol 11:28-35
78. Rengpipat S, Lowe SE, Zeikus JG (1988b) Effect of extreme salt concentrations on the physiology and biochemistry of Halobacteroides acetoethylicus. J Bacteriol 170:3065-3071
79. Shiba H (1991) Anaerobic halophiles. In: Horikoshi K, Grant WD (eds) Superbugs. Microorganisms in extreme environments. Japan Scientific Societies Press/Springer, Tokyo/Berlin, pp 191-211
80. Shiba H, Horikoshi K (1988) Isolation and characterization of novel anaerobic, halophilic eubacteria from hypersaline environments of western America and Kenya. In: Proceedings of the FEMS symposium on the microbiology of extreme environments and its biotechnological potential, Estoril, pp 371-374
81. Shiba H, Yamamoto H, Horikoshi K (1989) Isolation of strictly anaerobic halo-philes from the aerobic surface sediments of hypersaline environments in California and Nevada. FEMS Microbiol Lett 57:191-196
82. Siman'kova MV, Zavarzin GA (1992) Anaerobic decomposition of cellulose in lake Sivash and hypersaline lagoons of Arabat spit. Mikrobiologiya 61:193-197
83. Simankova MV, Chernych NA, Osipov GA, Zavarzin GA (1993) Halocella cellulolytica gen. nov., sp. nov., a new obligately anaerobic, halophilic, cellu-lolytic bacterium. Syst Appl Microbiol 16:385-389
84. Sørensen KB, Canfield DE, Teske AP, Oren A (2005) Community composition of a hypersaline endoevaporitic microbial mat. Appl Environ Microbiol 71:7352-7365
85. Sorokin DY, Detkova EN, Muyzer G (2011) Sulfur-dependent respiration under extremely haloalkaline conditions in soda lake 'acetogens' and the description of Natroniella sulfidigena sp. nov. FEMS Microbiol Lett 319:88-95
86. Switzer Blum J, Stolz JF, Oren A, Oremland RS (2001) Selenihalanaerobacter shriftii gen. nov., sp. nov., a halophilic anaerobe from Dead Sea sediments that respires selenate. Arch Microbiol 175:208-219
87. Switzer Blum J, Han S, Lanoil B, Saltikov C, White B, Tabita FR, Langley S, Beveridge TJ, Jahnke L, Oremland RS (2009) Ecophysiology of "Halarsena-tibacter silvermanii" strain SLAS-1T, gen. nov., sp. nov., a facultative chemo-autotrophic arsenate-respirer from salt-saturated Searles Lake, California. Appl Environ Microbiol 75:1950-1960
88. Tan T-C, Mijts BN, Swaminathan K, Patel BKC, Divne C (2008) Crystal structure of the polyextremophilic a-amylase AmyB from Halothermothrix orenii: details of a productive enzyme-substrate complex and an N domain with a role in binding raw starch. J Mol Biol 378:850-868
89. Tian Y-S, Xu J, Xiong A-S, Zhao W, Gao F, Fu X-Y, Peng R-H, Yao Q-H (2012) Functional characterization of Class II 5-enopyruvylshikimate-3-phosphate synthase from Halothermothrix orenii H168 in Escherichia coli and transgenic Arabidopsis. Appl Microbiol Biotechnol 93:241-250
90. Tourova TP (2000) The role of DNA-DNA hybridization and 16S rRNA gene sequencing in solving taxonomic problems by the example of the order Haloanaerobiales. Mikrobiologiya 69:623-634
91. Tourova TP, Boulygina ES, Zhilina TN, Hanson RS, Zavarzin GA (1995) Phylo-genetic study of haloanaerobic bacteria by 16S ribosomal RNA sequences analysis. Syst Appl Microbiol 18:189-195
92. Tsai C-R, Garcia J-L, Patel BKC, Cayol J-L, Baresi L, Mah RA (1995) Haloanaerobium alcaliphilum sp. nov., an anaerobic moderate halophile from the sediments of Great Salt Lake. Utah Int J Syst Bacteriol 45:301-307
93. Wise DL (1987) Meeting report-first international workshop on biogasification and biorefining of Texas lignite. Res Conserv 15:229-247
94. Yarza P, Ludwig W, Euzéby J, Amann R, Schleifer K-H, Glöckner FO, Rosseló-Móra R (2010) Update of the all-species living tree project based on 16S and 23S rRNA sequence analyses. Syst Appl Microbiol 33:291-299
95. Zavarzin GA (2009) Genus II. Halocella Simankova, Osipov and Zavarzin 1994, 182VP (Effective publication: Simankova, Chernych, Osipov and Zavarzin 1993, 389). In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, pp 1201-1202
96. Zavarzin GA, Zhilina TN (2009a) Genus II. Acetohalobium Zhilina and Zavarzin 1990b, 470VP (Effective publication: Zhilina and Zavarzin 1990c, 747). In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, pp 1209-1212
97. Zavarzin GA, Zhilina TN (2009b) Genus V. Natroniella Zhilina, Zavarzin, Detkova and Rainey 1996a, 1189VP (Effective publication: Zhilina, Zavarzin, Detkova and Rainey 1996b, 324). In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, pp 1216-1217
98. Zavarzin GA, Zhilina TN, Pusheva MA (1994) Halophilic acetogenic bacteria. In: Drake HL (ed) Acetogenesis. Chapman and Hall, New York, pp 432-444
99. Zeikus JG (1983) Metabolic communication between biodegradative populations in nature. In: Slater JH, Whittenbury R, Wimpenny JWT (eds) Microbes in their natural environments. 34th symposium, Society for General Microbiology. Cambridge University Press, Cambridge, pp 423-462
100. Zeikus JG, Hegge PW, Thompson TE, Phelps TJ, Langworthy TA (1983) Isolation and description of Haloanaerobium praevalens gen. nov. and sp. nov., an obligately anaerobic halophile common to Great Salt Lake sediments. Curr Microbiol 9:225-234
101. Zhilina TN (2009) Genus IV. Halonatronum Zhilina, Garnova, Tourova, Kostrikina and Zavarzin 2001a, 263VP (Effective publication: Zhilina, Garnova, Tourova, Kostrikina and Zavarzin 2001b, 70). In: Zavarzin GA, Oren A, De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn, The Firmicutes. Springer, Dordrecht, p 1215
102. Zhilina TN, Zavarzin GA (1990a) Extremely halophilic, methylotrophic, anaerobic bacteria. FEMS Microbiol Rev 87:315-322
103. Zhilina TN, Zavarzin GA (1990b) A new extremely halophilic homoacetogenic bacterium Acetohalobium arabaticum gen. nov., sp. nov. Dokl Akad Nauk SSSR 311:745-747 (in Russian)
104. Zhilina TN, Zavarzin GA (1991) Anaerobic bacteria participating in organic matter destruction in halophilic cyanobacterial community. J Obshey Biol 52:302-318 (in Russian)
105. Zhilina TA, Zavarzin GA(1994) Alkaliphilic anaerobic community at pH 10. Curr Microbiol 29:109-112
106. Zhilina TN, Kevbrin VV, Lysenko AM, Zavarzin GA (1991) Isolation of saccharolytic anaerobes from a halophilic cyanobacterial mat. Microbiology 60:101-107
107. Zhilina TN, Miroshnikova LV, Osipov GA, Zavarzin GA (1992a) Halobacteroides lacunaris sp. nov., new saccharolytic, anaerobic, extremely halophilic organism from the lagoon-like hypersaline lake Chokrak. Microbiology 60:495-503
108. Zhilina TN, Zavarzin GA, Bulygina ES, Kevbrin VV, Osipov GA, Chumakov KM (1992b) Ecology, physiology and taxonomy studies on a new taxon of Haloanaerobiaceae, Haloincola saccharolytica gen. nov., sp. nov. Syst Appl Microbiol 15:275-284
109. Zhilina TN, Zavarzin GA, Detkova EN, Rainey FA (1996) Natroniella acetigena gen. nov. sp. nov., an extremely haloalkaliphilic, homoacetogenic bacterium: a new member of Haloanaerobiales. Curr Microbiol 32:320-326
110. Zhilina TN, Turova TP, Lysenko AM, Kevbrin VV (1997) Reclassification of Halobacteroides halobius Z-7287 on the basis of phylogenetic analysis as a new species Halobacteroides elegans sp. nov. Microbiology 66:97-103
111. Zhilina TN, Tourova TP, Kuznetsov BB, Kostrikina NA, Lysenko AM (1999) Orenia sivashensis sp. nov., a new moderately halophilic anaerobic bacterium from lake Sivash lagoons. Microbiology 68:452-459
112. Zhilina TN, Garnova ES, Tourova TP, Kostrikina NA, Zavarzin GA (2001) Halonatronum saccharophilum gen. nov. sp. nov.: a new haloalkaliphilic bacterium of the order Haloanaerobiales from Lake Magadi. Microbiology 70:64-72
113. Zhilina TN, Zavarzina DG, Panteleeva AN, Osipov GA, Kostrikina NA, Tourova TP, Zavarzin GA (2012) Fuchsiella alkaliacetigena gen. nov., sp. nov., the first alkaliphilic, lithoautotrophic homoacetogenic bacterium. Int J Syst Evol Microbiol 62:1666-1673