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Volumn 10, Issue 4, 2015, Pages

Erratum: Strategies for achieving high sequencing accuracy for low diversity samples and avoiding sample bleeding using illumina platform (PLOS ONE (2015) 10:4 (E0120520) DOI: 10.1371/journal.pone.0120520;Strategies for achieving high sequencing accuracy for low diversity samples and avoiding sample bleeding using Illumina platform

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTICAL ERROR; ARTICLE; COMPUTER PROGRAM; CONTROLLED STUDY; GENETIC VARIABILITY; ILLUMINA SEQUENCING; IMAGE ANALYSIS; INTERMETHOD COMPARISON; MEASUREMENT ACCURACY; PRACTICE GUIDELINE; QUALITY CONTROL; SEQUENCE ANALYSIS; AUTOMATED PATTERN RECOGNITION; HIGH THROUGHPUT SEQUENCING; HUMAN; METHODOLOGY; SOFTWARE;

EID: 84929501399     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0227431     Document Type: Erratum
Times cited : (82)

References (16)
  • 1
  • 2
    • 0034727107 scopus 로고    scopus 로고
    • An SNP map of the human genome generated by reduced representation shotgun sequencing
    • PMID: 11029002
    • Altshuler D, Pollara VJ, Cowles CR, Van Etten WJ, Baldwin J, et al. (2000) An SNP map of the human genome generated by reduced representation shotgun sequencing. Nature 407: 513-516. doi: 10.1038/35035083 PMID: 11029002
    • (2000) Nature , vol.407 , pp. 513-516
    • Altshuler, D.1    Pollara, V.J.2    Cowles, C.R.3    Van Etten, W.J.4    Baldwin, J.5
  • 3
    • 77956299844 scopus 로고    scopus 로고
    • MicroRNA profiling: Separating signal from noise
    • Baker M (2010) MicroRNA profiling: separating signal from noise. Nature Methods 7: 687.
    • (2010) Nature Methods , vol.7 , pp. 687
    • Baker, M.1
  • 5
    • 84875754465 scopus 로고    scopus 로고
    • Nucleotide-resolution DNA double-strand break mapping by next-generation sequencing
    • PMID: 23503052
    • Crosetto N, Mitra A, Silva MJ, Bienko M, Dojer N, et al. (2013) Nucleotide-resolution DNA double-strand break mapping by next-generation sequencing. Nature Methods 10: 361-365. doi: 10.1038/nmeth.2408 PMID: 23503052
    • (2013) Nature Methods , vol.10 , pp. 361-365
    • Crosetto, N.1    Mitra, A.2    Silva, M.J.3    Bienko, M.4    Dojer, N.5
  • 6
    • 79551545281 scopus 로고    scopus 로고
    • Large Scale Loss of Data in Low-Diversity Illumina Sequencing Libraries Can Be Recovered by Deferred Cluster Calling
    • PMID: 21305042
    • Krueger F, Andrews SR, Osborne CS (2011) Large Scale Loss of Data in Low-Diversity Illumina Sequencing Libraries Can Be Recovered by Deferred Cluster Calling. PLOS ONE 6: e16607. doi: 10.1371/journal.pone.0016607 PMID: 21305042
    • (2011) PLOS ONE , vol.6 , pp. e16607
    • Krueger, F.1    Andrews, S.R.2    Osborne, C.S.3
  • 7
    • 69949135779 scopus 로고    scopus 로고
    • Swift: Primary data analysis for the Illumina Solexa sequencing platform
    • PMID: 19549630
    • Whiteford N, Skelly T, Curtis C, Ritchie ME, Löhr A, et al. (2009) Swift: primary data analysis for the Illumina Solexa sequencing platform. Bioinformatics 25: 2194-2199. doi: 10.1093/bioinformatics/btp383 PMID: 19549630
    • (2009) Bioinformatics , vol.25 , pp. 2194-2199
    • Whiteford, N.1    Skelly, T.2    Curtis, C.3    Ritchie, M.E.4    Löhr, A.5
  • 8
    • 84929475127 scopus 로고    scopus 로고
    • as visited on 4/13/ URL
    • Illumina Manual. HCS 1.4/RTA 1.12 Theory of Operation, as visited on 4/13/2014. URL http://www.illumina.com/Documents/products/technotes/technote-rta-theory-operations.pdf.
    • (2014) HCS 1.4/RTA 1.12 Theory of Operation
  • 9
    • 84929475128 scopus 로고    scopus 로고
    • as visited on 2/24/ URL
    • Illumina Technical Note. Low-Diversity Sequencing on the Illumina HiSeq Platform, as visited on 2/24/2015. URL http://res.illumina.com/documents/products/technotes/technote-hiseq-low-diversity.pdf.
    • (2015) Low-Diversity Sequencing on the Illumina HiSeq Platform
  • 10
    • 84855295457 scopus 로고    scopus 로고
    • Double indexing overcomes inaccuracies in multiplex sequencing on the Illumina platform
    • PMID: 22021376
    • Kircher M, Sawyer S, Meyer M (2012) Double indexing overcomes inaccuracies in multiplex sequencing on the Illumina platform. Nucleic Acids Research 40: e3-e3. doi: 10.1093/nar/gkr771 PMID: 22021376
    • (2012) Nucleic Acids Research , vol.40 , pp. e3-e3
    • Kircher, M.1    Sawyer, S.2    Meyer, M.3
  • 11
    • 34548588390 scopus 로고    scopus 로고
    • Targeted high-throughput sequencing of tagged nucleic acid samples
    • PMID: 17670798
    • Meyer M, Stenzel U, Myles S, Prüfer K, Hofreiter M (2007) Targeted high-throughput sequencing of tagged nucleic acid samples. Nucleic Acids Research 35: e97. doi: 10.1093/nar/gkm566 PMID: 17670798
    • (2007) Nucleic Acids Research , vol.35 , pp. e97
    • Meyer, M.1    Stenzel, U.2    Myles, S.3    Prüfer, K.4    Hofreiter, M.5
  • 12
    • 77449121614 scopus 로고    scopus 로고
    • Target-enrichment strategies for next-generation sequencing
    • PMID: 20111037
    • Mamanova L, Coffey AJ, Scott CE, Kozarewa I, Turner EH, et al. (2010) Target-enrichment strategies for next-generation sequencing. Nature Methods 7: 111-118. doi: 10.1038/nmeth.1419 PMID: 20111037
    • (2010) Nature Methods , vol.7 , pp. 111-118
    • Mamanova, L.1    Coffey, A.J.2    Scott, C.E.3    Kozarewa, I.4    Turner, E.H.5
  • 13
    • 77956285690 scopus 로고    scopus 로고
    • Illumina sequencing library preparation for highly multiplexed target capture and sequencing
    • pdb-prot5448
    • Meyer M, Kircher M (2010) Illumina sequencing library preparation for highly multiplexed target capture and sequencing. Cold Spring Harbor Protocols 2010: pdb-prot5448.
    • (2010) Cold Spring Harbor Protocols , vol.2010
    • Meyer, M.1    Kircher, M.2
  • 14
    • 69549139892 scopus 로고    scopus 로고
    • Direct multiplex sequencing (DMPS) - A novel method for targeted high-throughput sequencing of ancient and highly degraded DNA
    • PMID: 19635845
    • Stiller M, Knapp M, Stenzel U, Hofreiter M, Meyer M (2009) Direct multiplex sequencing (DMPS) - a novel method for targeted high-throughput sequencing of ancient and highly degraded DNA. Genome Research 19: 1843-1848. doi: 10.1101/gr.095760.109 PMID: 19635845
    • (2009) Genome Research , vol.19 , pp. 1843-1848
    • Stiller, M.1    Knapp, M.2    Stenzel, U.3    Hofreiter, M.4    Meyer, M.5
  • 15
    • 84929475129 scopus 로고    scopus 로고
    • as visited on 3/21/14. URL
    • Illumina Manual. Using a PhiX Control for HiSeq Sequencing Runs, as visited on 3/21/14. URL http://www.illumina.com/documents/products/technotes/technote-phixcontrolv3.pdf.
    • Using a PhiX Control for HiSeq Sequencing Runs
  • 16
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • PMID: 22388286
    • Langmead B, Salzberg SL (2012) Fast gapped-read alignment with Bowtie 2. Nature Methods 9:357-359. doi: 10.1038/nmeth.1923 PMID: 22388286
    • (2012) Nature Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.