Fully assembled genome sequence for Salmonella enterica subsp. enterica serovar Javiana CFSAN001992

Genome Announcements

Volumn 1, Issue 2, 2013, Pages

  Allard, Marc W ^a   Muruvanda, Tim ^a   Strain, Errol ^a   Timme, Ruth ^a   Luo, Yan ^a   Wang, Charles ^a   Keys, Christine E ^a   Payne, Justin ^a   Cooper, Tony ^b   Luong, Khai ^a   Song, Yi ^a   Chin, Chen Shan ^b   Korlach, Jonas ^b   Roberts, Rich J ^c   Evans, Peter ^a   Musser, Steven M ^a   Brown, Eric W ^a  

^a CENTER FOR DRUG EVALUATION AND RESEARCH   (United States)

^b PACIFIC BIOSCIENCES   (United States)

^c NEW ENGLAND BIOLABS   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84929475544     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00081-13     Document Type: Article

References (7)

1. Lienau EK, Strain E, Wang C, Zheng J, Ottesen AR, Keys CE, Hammack TS, Musser SM, Brown EW, Allard MW, Cao G, Meng J, Stones R. 2011. Identification of a salmonellosis outbreak by means of molecular sequencing. N Engl J. Med. 364:981-982.
2. Allard MW, Luo Y, Strain E, Pettengill J, Timme R, Wang C, Li C, Keys CE, Zheng J, Stones R, Wilson MR, Musser SM, Brown EW. 2013. On the evolutionary history, population genetics and diversity among isolates of Salmonella Enteritidis PFGE pattern JEGX01.0004. PLoS One 8:e55254.
3. Murray IA, Clark TA, Morgan RD, Boitano M, Anton BP, Luong K, Fomenkov A, Turner SW, Korlach J, Roberts RJ. 2012. The methylomes of six bacteria. Nucleic Acids Res. 40:11450-11462.
4. Fang G, Munera D, Friedman DI, Mandlik A, Chao MC, Banerjee O, Feng Z, Losic B, Mahajan MC, Jabado OJ, Deikus G, Clark TA, Luong K, Murray IA, Davis BM, Keren-Paz A, Chess A, Roberts RJ, Korlach J, Turner SW, Kumar V, Waldor MK, Schadt EE. 2012. Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing. Nat. Biotechnol. 30:1232-1239.
5. Roberts RJ, Vincze T, Posfai J, Macelis D. 2010. Rebase-a database for DNA restriction and modification: enzymes, genes and genomes. Nucleic Acids Res. 38:D234-D236.
6. Underwood AP, Dallman T, Thomson NR, Williams M, Harker K, Perry N, Adak B, Willshaw G, Cheasty T, Green J, Dougan G, Parkhill J, Wain J. 2013. Public health value of next-generation DNA sequencing of enterohemorrhagic Escherichia coli isolates from an outbreak. J. Clin. Microbiol. 51: 232-237.
7. Aarestrup FM, Brown EW, Detter C, Gerner-Smidt P, Gilmour MW, Harmsen D, Hendriksen RS, Hewson R, Heymann DL, Johansson K, Ijaz K, Keim PS, Koopmans M, Kroneman A, Lo Fo Wong D, Lund O, Palm D, Sawanpanyalert P, Sobel J, Schlundt J. 2012. Integrating genomebased informatics to modernize global disease monitoring, information sharing, and response. Emerg. Infect. Dis. 18:e1.