Mapping of single-copy genes by TSA-FISH in the codling moth, Cydia pomonella

BMC Genetics

Volumn 15, Issue , 2014, Pages

  Carabajal Paladino, Leonela Z ^a   Nguyen, Petr ^a,b   Šíchová, Jindra ^a,b   Marec, František ^a,b  

^a INSTITUTE OF ENTOMOLOGY   (Czech Republic)

^b UNIVERSITY OF SOUTH BOHEMIA   (Czech Republic)

Author keywords

[No Author keywords available]

Indexed keywords

ACETYLCHOLINESTERASE; ISOPROPAMIDE IODIDE; NOTCH RECEPTOR;

ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; BUTTERFLY; CHROMOSOMAL LOCALIZATION; CLINICAL PROTOCOL; COLOR; CONTROLLED STUDY; CYDIA POMONELLA; CYTOGENETICS; DNA INTEGRATION; DNA PROBE; FLUORESCENCE IN SITU HYBRIDIZATION; GENE AMPLIFICATION; GENE LOCATION; GENE MAPPING; GENETIC ANALYSIS; LEPIDOPTERA; MALE; MOTH; NONHUMAN; SEX CHROMOSOME; SYNTENY; TRANSGENE; TYRAMIDE SIGNAL AMPLIFICATION; ANIMAL; CHROMOSOME MAP; GENE DOSAGE; GENE LOCUS; GENETICS; INSECT CHROMOSOME; PROCEDURES;

BACTERIA (MICROORGANISMS); CYDIA POMONELLA; HEXAPODA; LEPIDOPTERA; PAPILIONOIDEA; TORTRICIDAE;

ANIMALS; CHROMOSOME MAPPING; CHROMOSOMES, INSECT; GENE DOSAGE; GENETIC LOCI; IN SITU HYBRIDIZATION, FLUORESCENCE; MOTHS;

EID: 84929152387     PISSN: None     EISSN: 14712156     Source Type: Journal    
DOI: 10.1186/1471-2156-15-S2-S15     Document Type: Article

References (71)

1. Barnes MM: Codling moth occurrence, host race formation, and damage. In World Crop Pests. Tortricid Pests. Their Biology, Natural Enemies and Control. Amsterdam: Elsevier;Van der Geest LPS, Evenhuis HH 1991:313-327.
2. Wearing CH, Hansen JD, Whyte C, Miller CE, Brown J: The potential for spread of codling moth (Lepidoptera: Tortricidae) via commercial sweet cherry fruit: a critical review and risk assessment. Crop Prot 2001, 20:465-488.
3. Men QL, Chen MH, Zhang YL, Feng JN: Genetic structure and diversity of a newly invasive species, the codling moth, Cydia pomonella (L.) (Lepidoptera: Tortricidae) in China. Biol Invasions 2013, 15:447-458.
4. Dunley JE, Welter SC: Correlated insecticide cross-resistance in azinphosmethyl resistant codling moth (Lepidoptera: Tortricidae). J Econ Entomol 2000, 93:955-962.
5. Reyes M, Franck P, Charmillot PJ, Ioriatti C, Olivares J, Pasqualini E, Sauphanor B: Diversity of insecticide resistance mechanisms and spectrum in European populations of the codling moth, Cydia pomonella. Pest Manag Sci 2007, 63:890-902.
6. Reyes M, Franck P, Olivares J, Margaritopoulos J, Knight A, Sauphanor B: Worldwide variability of insecticide resistance mechanisms in the codling moth, Cydia pomonella L. (Lepidoptera: Tortricidae). Bull Entomol Res 2009, 99:359-369.
7. Arthurs SP, Lacey LA, Miliczky ER: Evaluation of the codling moth granulovirus and spinosad for codling moth control and impact on nontarget species in pear orchards. Biol Control 2007, 41:99-109.
8. Steinmann KP, Zhang M, Grant JA: Does use of pesticides known to harm natural enemies of spider mites (Acari: Tetranychidae) result in increased number of miticide applications? An examination of California walnut orchards. J Econ Entomol 2011, 104:1496-1501.
9. Devine GJ, Furlong MJ: Insecticide use: Contexts and ecological consequences. Agric Human Values 2007, 24:281-306.
10. Dyck VA, Hendrichs J, Robinson AS: Sterile Insect Technique. Principles and Practice in Area-wide Integrated Pest Management. Dordrecht: Springer; 2005.
11. Proverbs MD, Newton JR, Campbell CJ: Codling moth - a pilot program of control by sterile insect release in British Columbia. Can Entomol 1982, 114:363-376.
12. Dyck VA, Graham SA, Bloem SK: Implementation of the sterile insect release programme to eradicate the codling moth, Cydia pomonella (L.) (Lepidoptera: Olethreutidae) in British Columbia, Canada. In Management of Insect Pests: Nuclear and Related Molecular and Genetic Techniques. Proceedings of an International Symposium Organised by the IAEA/FAO: 19-23 October 1992; Vienna. Vienna: IAEA;Howard-Kitto P, Kelleher RF, Ramesh GV 1993:285-297.
13. Bloem S, McCluskey A, Fugger R, Arthur S, Wood S, Carpenter J: Suppression of the codling moth Cydia pomonella in British Columbia, Canada using an area-wide integrated approach with an SIT component. In Area-wide Control of Insect Pests. From Research to Field Implementation. Dordrecht: Springer;Vreysen MJB, Robinson AS, Hendrichs J 2007:591-601.
14. Knipling EF: Possibilities of insect control or eradication through the use of sexually sterile males. J Econ Entomol 1955, 48:459-462.
15. Vreysen MJB, Carpenter JE, Marec F: Improvement of the sterile insect technique for codling moth Cydia pomonella (Linnaeus) (Lepidoptera Tortricidae) to facilitate expansion of field application. J Appl Entomol 2010, 134:165-181.
16. McInnis DO, Tam S, Grace C, Miyashita D: Population suppression and sterility rates induced by variable sex-ratio, sterile insect releases of Ceratitis capitata (Diptera, Tephritidae) in Hawaii. Ann Entomol Soc Am 1994, 87:231-240.
17. Hendrichs J, Franz G, Rendon P: Increased effectiveness and applicability of the sterile insect technique through male-only releases for control of Mediterranean fruit flies during fruiting seasons. J Appl Entomol 1995, 119:371-377.
18. Rendón P, McInnis D, Lance D, Stewart J: Medfly (Diptera: Tephritidae) genetic sexing: Large-scale field comparison of males-only and bisexual sterile fly releases in Guatemala. J Econ Entomol 2004, 97:1547-1553.
19. Knipple DC: Prospects for the use of transgenic approaches to improve the efficacy of the Sterile Insect Technique (SIT) for control of the codling moth Cydia pomonella Linnaeus (Lepidoptera: Tortricidae). Crop Prot 2013, 44:142-146.
20. Marec F, Neven LG, Robinson AS, Vreysen M, Goldsmith MR, Nagaraju J, Franz G: Development of genetic sexing strains in Lepidoptera: from traditional to transgenic approaches. J Econ Entomol 2005, 98:248-259.
21. Marec F, Neven LG, Fuková I: Developing transgenic sexing strains for the release of non-transgenic sterile male codling moths Cydia pomonella. In Area-wide Control of Insect Pests. From Research to Field Implementation. Dordrecht: Springer;Vreysen MJB, Robinson AS, Hendrichs J 2007:103-111.
22. Fuková I, Neven LG, Bárcenas NM, Gund NA, Dalíková M, Marec F: Rapid assessment of the sex of codling moth Cydia pomonella (Linnaeus) (Lepidoptera: Tortricidae) eggs and larvae. J Appl Entomol 2009, 133:249-261.
23. Fuková I, Nguyen P, Marec F: Codling moth cytogenetics: karyotype, chromosomal location of rDNA, and molecular differentiation of sex chromosomes. Genome 2005, 48:1083-1092.
24. Šíchová J, Nguyen P, Dalíková M, Marec F: Chromosomal evolution in tortricid moths: Conserved karyotypes with diverged features. PLoS One 2013, 8:e64520.
25. Fuková I, Traut W, Vítková M, Nguyen P, Kubícková S, Marec F: Probing the W chromosome of the codling moth, Cydia pomonella, with sequences from microdissected sex chromatin. Chromosoma 2007, 116:135-145.
26. Nguyen P, Sỳkorová M, Šíchová J, Kuta V, Dalíková M, Capková Frydrychová R, Neven LG, Sahara K, Marec F: Neo-sex chromosomes and adaptive potential in tortricid pests. Proc Natl Acad Sci USA 2013, 110:6931-6936.
27. Speel EJM, Hopman AHN, Komminoth P: Signal amplification for DNA and mRNA. In In Situ Hybridization Protocols. Volume 123. Totowa: Humana Press Inc.;Darby IA 2000:195-216, Methods in Molecular Biology.
28. Kirov I, Van Laere K, De Riek J, De Keyser E, Van Roy N, Khrustaleva L: Anchoring linkage groups of the Rosa genetic map to physical chromosomes with Tyramide-FISH and EST-SNP markers. PLoS One 2014, 9:e95793.
29. Courtet M, Flajnik M, Du Pasquier L: Major histocompatibility complex and immunoglobulin loci visualized by in situ hybridization on Xenopus chromosomes. Dev Comp Immunol 2001, 25:149-157.
30. Krylov V, Mácha J, Tlapáková T, Takác M, Jonák J: The c-src1 gene visualized by in situ hybridization on Xenopus laevis chromosomes. Cytogenet Genome Res 2003, 103:169-172.
31. Krylov V, Tlapakova T, Macha J: Localization of the single copy gene Mdh2 on Xenopus tropicalis chromosomes by FISH-TSA. Cytogenet Genome Res 2007, 116:110-112.
32. Mácha J, Teichmanová R, Sater AK, Wells DE, Tlapáková T, Zimmerman LB, Krylov V: Deep ancestry of mammalian X chromosome revealed by comparison with the basal tetrapod Xenopus tropicalis. BMC Genomics 2012, 13:315.
33. Seifertova E, Zimmerman LB, Gilchrist MJ, Macha J, Kubickova S, Cernohorska H, Zarsky V, Owens NDL, Sesay AK, Tlapakova T, Krylov V: Efficient high-throughput sequencing of a laser microdissected chromosome arm. BMC Genomics 2013, 14:357.
34. Mediouni J, Fuková I, Frydrychová R, Dhouibi MH, Marec F: Karyotype, sex chromatin and sex chromosome differentiation in the carob moth, Ectomyelois ceratoniae (Lepidoptera: Pyralidae). Caryologia 2004, 57:184-194.
35. Yoshido A, Bando H, Yasukochi Y, Sahara K: The Bombyx mori karyotype and the assignment of linkage groups. Genetics 2005, 170:675-685.
36. Shibata F, Sahara K, Naito Y, Yasukochi Y: Reprobing multicolor FISH preparations in lepidopteran chromosome. Zool Sci 2009, 26:187-190.
37. van Gijlswijk RPM, Zijlmans HJMAA, Wiegant J, Bobrow MN, Erickson TJ, Adler KE, Tanke HJ, Raap AK: Fluorochrome-labeled tyramides: Use in immunocytochemistry and fluorescence in situ hybridization. J Histochem Cytochem 1997, 45:375-382.
38. Denkers N, García-Villalba P, Rodesch CK, Nielson KR, Mauch TJ: FISHing for chick genes: Triple-label whole-mount fluorescence in situ hybridization detects simultaneous and overlapping gene expression in avian embryos. Dev Dyn 2004, 229:651-657.
39. Traut W, Sahara K, Marec F: Sex chromosomes and sex determination in Lepidoptera. Sex Dev 2007, 1:332-346.
40. Marec F, Sahara K, Traut W: Rise and fall of the W chromosome in Lepidoptera. In Molecular Biology and Genetics of the Lepidoptera. Boca Raton: CRC Press;Goldsmith MR, Marec F 2010:49-63.
41. Sahara K, Yoshido A, Traut W: Sex chromosome evolution in moths and butterflies. Chromosome Res 2012, 20:83-94.
42. Rego A, Marec F: Telomeric and interstitial telomeric sequences in holokinetic chromosomes of Lepidoptera: Telomeric DNA mediates association between postpachytene bivalents in achiasmatic meiosis of females. Chromosome Res 2003, 11:681-694.
43. Sahara K, Yoshido A, Marec F, Fuková I, Zhang HB, Wu CC, Goldsmith MR, Yasukochi Y: Conserved synteny of genes between chromosome 15 of Bombyx mori and a chromosome of Manduca sexta shown by five-color BAC-FISH. Genome 2007, 50:1061-1065.
44. Yasukochi Y, Tanaka-Okuyama M, Shibata F, Yoshido A, Marec F, Wu CC, Zhang HB, Goldsmith MR, Sahara K: Extensive conserved synteny of genes between the karyotypes of Manduca sexta and Bombyx mori revealed by BAC-FISH mapping. PLoS One 2009, 4:e7465.
45. Yoshido A, Sahara K, Marec F, Matsuda Y: Step-by-step evolution of neosex chromosomes in geographical populations of wild silkmoths, Samia cynthia ssp. Heredity 2011, 106:614-624.
46. Yoshido A, Yasukochi Y, Sahara K: Samia cynthia versus Bombyx mori: Comparative gene mapping between a species with a low-number karyotype and the model species of Lepidoptera. Insect Biochem Mol Biol 2011, 41:370-377.
47. Sahara K, Yoshido A, Shibata F, Fujikawa-Kojima N, Okabe T, Tanaka- Okuyama M, Yasukochi Y: FISH identification of Helicoverpa armigera and Mamestra brassicae chromosomes by BAC and fosmid probes. Insect Biochem Mol Biol 2013, 43:644-653.
48. Van't Hof AE, Nguyen P, Dalíková M, Edmonds N, Marec F, Saccheri IJ: Linkage map of the peppered moth, Biston betularia (Lepidoptera, Geometridae): a model of industrial melanism. Heredity 2013, 110:283-295.
49. Mita K, Kasahara M, Sasaki S, Nagayasu Y, Yamada T, Kanamori H, Namiki N, Kitagawa M, Yamashita H, Yasukochi Y, Kadono-Okuda K, Yamamoto K, Ajimura M, Ravikumar G, Shimomura M, Nagamura Y, Shin-I T, Abe H, Shimada T, Morishita S, Sasaki T: The genome sequence of silkworm, Bombyx mori. DNA Research 2004, 11:27-35.
50. Xia Q, Zhou Z, Lu C, Cheng D, Dai F, Li B, Zhao P, Zha X, Cheng T, Chai C, Pan G, Xu J, Liu C, Lin Y, Qian J, Hou Y, Wu Z, Li G, Pan M, Li C, Shen Y, Lan X, Yuan L, Li T, Xu H, Yang G, Wan Y, Zhu Y, Yu M, Shen W, et al: A draft sequence for the genome of the domesticated silkworm (Bombyx mori). Science 2004, 306:1937-1940.
51. The International Silkworm Genome Consortium: The genome of a lepidopteran model insect, the silkworm Bombyx mori. Insect Biochem Mol Biol 2008, 38:1036-1045.
52. Yamamoto K, Nohata J, Kadono-Okuda K, Narukawa J, Sasanuma M, Sasanuma S, Minami H, Shimomura M, Suetsugu Y, Banno Y, Osoegawa K, de Jong PJ, Goldsmith MR, Mita K: A BAC-based integrated linkage map of the silkworm Bombyx mori. Genome Biol 2008, 9:R21.
53. Janes DE, Valenzuela N, Ezaz T, Amemiya C, Edwards SV: Sex chromosome evolution in amniotes: Applications for bacterial artificial chromosome libraries. J Biomed Biotechnol 2011, 132975.
54. Nanda I, Zend-Ajusch E, Shan Z, Grützner F, Schartl M, Burt DW, Koehler M, Fowler VM, Goodwin G, Schneider WJ, Mizuno S, Dechant G, Haaf T, Schmid M: Conserved synteny between the chicken Z sex chromosome and human chromosome 9 includes the male regulatory gene DMRT1: a comparative (re)view on avian sex determination. Cytogenet Cell Genet 2000, 89:67-78.
55. Matsuda Y, Nishida-Umehara C, Tarui H, Kuroiwa A, Yamada K, Isobe T, Ando J, Fujiwara A, Hirao Y, Nishimura O, Ishijima J, Hayashi A, Saito T, Murakami T, Murakami Y, Kuratani S, Agata K: Highly conserved linkage homology between birds and turtles: Bird and turtle chromosomes are precise counterparts of each other. Chromosome Res 2005, 13:601-615.
56. Matsubara K, Tarui H, Toriba M, Yamada K, Nishida-Umehara C, Agata K, Matsuda Y: Evidence for different origin of sex chromosomes in snakes, birds, and mammals and step-wise differentiation of snake sex chromosomes. Proc Natl Acad Sci USA 2006, 103:18190-18195.
57. Kawai A, Nishida-Umehara C, Ishijima J, Tsuda Y, Ota H, Matsuda Y: Different origins of bird and reptile sex chromosomes inferred from comparative mapping of chicken Z-linked genes. Cytogenet Genome Res 2007, 117:92-102.
58. Vicoso B, Emerson JJ, Zektser Y, Mahajan S, Bachtrog D: Comparative sex chromosome genomics in snakes: Differentiation, evolutionary strata, and lack of global dosage compensation. PLoS Biol 2013, 11:e1001643.
59. Kamimura M, Tateishi K, Tanaka-Okuyama M, Okabe T, Shibata F, Sahara K, Yasukochi Y: EST sequencing and fosmid library construction in a nonmodel moth, Mamestra brassicae, for comparative mapping. Genome 2012, 55:775-781.
60. Speel EJM, Hopman AHN, Komminoth P: Amplification methods to increase the sensitivity of in situ hybridization: Play CARD(S). J Histochem Cytochem 1999, 47:281-288.
61. Khrustaleva LI, Kik C: Localization of single-copy T-DNA insertion in transgenic shallots (Allium cepa) by using ultra-sensitive FISH with tyramide signal amplification. Plant J 2001, 25:699-707.
62. Orr HA: The population genetics of beneficial mutations. Philos Trans R Soc Lond B Biol Sci 2010, 365:1195-1201.
63. Gahan LJ, Pauchet Y, Vogel H, Heckel DG: An ABC transporter mutation is correlated with insect resistance to Bacillus thuringiensis Cry1Ac toxin. PLoS Genet 2010, 6:e1001248.
64. Baxter SW, Badenes-Pérez FR, Morrison A, Vogel H, Crickmore N, Kain W, Wang P, Heckel DG, Jiggins CD: Parallel evolution of Bacillus thuringiensis toxin resistance in Lepidoptera. Genetics 2011, 189:675-679.
65. Atsumi S, Miyamoto K, Yamamoto K, Narukawa J, Kawai S, Sezutsu H, Kobayashi I, Uchino K, Tamura T, Mita K, Kadono-Okuda K, Wada S, Kanda K, Goldsmith MR, Noda H: Single amino acid mutation in an ATP-binding cassette transporter gene causes resistance to Bt toxin Cry1Ab in the silkworm, Bombyx mori. Proc Natl Acad Sci USA 2012, 109:E1591-E1598.
66. Bourguet D, Prout M, Raymond M: Dominance of insecticide resistance presents a plastic response. Genetics 1996, 143:407-416.
67. Bourguet D, Lenormand T, Guillemaud T, Marcel V, Fournier D, Raymond M: Variation of dominance of newly arisen adaptive genes. Genetics 1997, 147:1225-1234.
68. Harrison PW, Mank JE, Wedell N: Incomplete sex chromosome dosage compensation in the Indian meal moth, Plodia interpunctella, based on de novo transcriptome assembly. Genome Biol Evol 2012, 4:1118-1126.
69. Kiuchi T, Koga H, Kawamoto M, Shoji K, Sakai H, Arai Y, Ishihara G, Kawaoka S, Sugano S, Shimada T, Suzuki Y, Suzuki MG, Katsuma S: A single female-specific piRNA is the primary determiner of sex in the silkworm. Nature 2014, 509:633-636.
70. Smith G, Chen YR, Blissard GW, Briscoe AD: Complete dosage compensation and sex-biased gene expression in the moth Manduca sexta. Genome Biol Evol 2014, 6:526-537.
71. Kanga LHB, Pree DJ, Plapp FW, van Lier JL: Sex-linked altered acetylcholinesterase resistance to carbamate insecticides in adults of the oriental fruit moth, Grapholita molesta (Lepidoptera: Tortricidae). Pestic Biochem Physiol 2001, 71:29-39.