-
1
-
-
84867636578
-
Streptococcus pneumoniae— a review of carriage, infection, serotype replacement and vaccination
-
Mehr S, Wood N. 2012 Streptococcus pneumoniae— a review of carriage, infection, serotype replacement and vaccination. Paediatr. Respir. Rev. 13, 258-264. (doi:10.1016/j.prrv.2011.12.001)
-
(2012)
Paediatr. Respir. Rev
, vol.13
, pp. 258-264
-
-
Mehr, S.1
Wood, N.2
-
2
-
-
69949111769
-
Burden of disease caused by Streptococcus pneumoniae in children younger than 5 years: Global estimates
-
O'Brien KL et al. 2009 Burden of disease caused by Streptococcus pneumoniae in children younger than 5 years: global estimates. The Lancet 374, 893-902. (doi:10.1016/s0140-6736(09)61204-6)
-
(2009)
The Lancet
, vol.374
, pp. 893-902
-
-
O'brien, K.L.1
-
3
-
-
30744458675
-
Post-PCV7 changes in colonizing pneumococcal serotypes in 16 Massachusetts communities, 2001 and 2004
-
Huang SS, Platt R, Rifas-Shiman SL, Pelton SI, Goldmann D, Finkelstein JA. 2005 Post-PCV7 changes in colonizing pneumococcal serotypes in 16 Massachusetts communities, 2001 and 2004. Pediatrics 116, 408-413. (doi:10.1542/peds.2004-2338)
-
(2005)
Pediatrics
, vol.116
, pp. 408-413
-
-
Huang, S.S.1
Platt, R.2
Rifas-Shiman, S.L.3
Pelton, S.I.4
Goldmann, D.5
Finkelstein, J.A.6
-
4
-
-
67649620111
-
Continued impact of pneumococcal conjugate vaccine on carriage in young children
-
Huang SS et al. 2009 Continued impact of pneumococcal conjugate vaccine on carriage in young children. Pediatrics 124, 1-11. (doi:10.1542/peds.2008-3099)
-
(2009)
Pediatrics
, vol.124
, pp. 1-11
-
-
Huang, S.S.1
-
5
-
-
84884637235
-
Serotype-specific changes in invasive pneumococcal disease after pneumococcal conjugate vaccine introduction: A pooled analysis of multiple surveillance sites
-
Feikin DR et al. 2013 Serotype-specific changes in invasive pneumococcal disease after pneumococcal conjugate vaccine introduction: a pooled analysis of multiple surveillance sites. PLoS Med. 10, e1001517. (doi:10.1371/journal.pmed.1001517)
-
(2013)
Plos Med
, pp. 10
-
-
Feikin, D.R.1
-
6
-
-
79251544864
-
Rapid pneumococcal evolution in response to clinical interventions
-
Croucher NJ et al. 2011 Rapid pneumococcal evolution in response to clinical interventions. Science 331, 430-434. (doi:10.1126/science.1198545)
-
(2011)
Science
, vol.331
, pp. 430-434
-
-
Croucher, N.J.1
-
7
-
-
84857655371
-
Pneumococcal genome sequencing tracks a vaccine escape variant formed through a multi-fragment recombination event
-
Golubchik T et al. 2012 Pneumococcal genome sequencing tracks a vaccine escape variant formed through a multi-fragment recombination event. Nat. Genet. 44, 352-355. (doi:10.1038/ng.1072)
-
(2012)
Nat. Genet
, vol.44
, pp. 352-355
-
-
Golubchik, T.1
-
8
-
-
84878735463
-
Population genomics of post-vaccine changes in pneumococcal epidemiology
-
Croucher NJ, Finkelstein JA, Pelton SI, Mitchell PK, Lee GM, Parkhill J, Bentley SD, Hanage WP, Lipsitch M. 2013 Population genomics of post-vaccine changes in pneumococcal epidemiology. Nat. Genet. 45, 656-663. (doi:10.1038/ng.2625)
-
(2013)
Nat. Genet
, vol.45
, pp. 656-663
-
-
Croucher, N.J.1
Finkelstein, J.A.2
Pelton, S.I.3
Mitchell, P.K.4
Lee, G.M.5
Parkhill, J.6
Bentley, S.D.7
Hanage, W.P.8
Lipsitch, M.9
-
9
-
-
84895858474
-
Dense genomic sampling identifies highways of pneumococcal recombination
-
9.Chewapreecha C et al. 2014 Dense genomic sampling identifies highways of pneumococcal recombination. Nat. Genet. 46, 305-309. (doi:10.1038/ng.2895)
-
(2014)
Nat. Genet
, vol.46
, pp. 305-309
-
-
Chewapreecha, C.1
-
11
-
-
84905500516
-
Carriage of Streptococcus pneumoniae and other respiratory bacterial pathogens in low and lower-middle income countries: A systematic review and meta-analysis
-
Adegbola RA, DeAntonio R, Hill PC, Roca A, Usuf E, Hoet B, Greenwood BM. 2014 Carriage of Streptococcus pneumoniae and other respiratory bacterial pathogens in low and lower-middle income countries: a systematic review and meta-analysis. PLoS ONE 9, e103293. (doi:10.1371/ journal.pone.0103293)
-
(2014)
Plos ONE 9
-
-
Adegbola, R.A.1
Deantonio, R.2
Hill, P.C.3
Roca, A.4
Usuf, E.5
Hoet, B.6
Greenwood, B.M.7
-
12
-
-
84901433339
-
Impact of 13-valent pneumococcal conjugate vaccination on carriage in young children in Massachusetts
-
Lee GM et al. 2014 Impact of 13-valent pneumococcal conjugate vaccination on carriage in young children in Massachusetts. J. Pediatric Infect. Dis. Soc. 3, 23-32. (doi:10.1093/jpids/pit057)
-
(2014)
J. Pediatric Infect. Dis. Soc
, vol.3
, pp. 23-32
-
-
Lee, G.M.1
-
13
-
-
84904761947
-
Global antibiotic consumption 2000 to 2010: An analysis of national pharmaceutical sales data
-
Van Boeckel TP, Gandra S, Ashok A, Caudron Q, Grenfell BT, Levin SA, Laxminarayan R. 2014 Global antibiotic consumption 2000 to 2010: an analysis of national pharmaceutical sales data. Lancet Infect. Dis. 14, 742-750. (doi:10.1016/s1473-3099(14) 70780-7)
-
(2014)
Lancet Infect. Dis
, vol.14
, pp. 742-750
-
-
Van Boeckel, T.P.1
Gandra, S.2
Ashok, A.3
Caudron, Q.4
Grenfell, B.T.5
Levin, S.A.6
Laxminarayan, R.7
-
14
-
-
42549136536
-
Population snapshot of emergent Streptococcus pneumoniae serotype 19A in the United States, 2005
-
Moore MR et al. 2008 Population snapshot of emergent Streptococcus pneumoniae serotype 19A in the United States, 2005. J. Infect. Dis. 197, 1016-1027. (doi:10.1086/528996)
-
(2008)
J. Infect. Dis
, vol.197
, pp. 1016-1027
-
-
Moore, M.R.1
-
15
-
-
63149106090
-
No coexistence for free: Neutral null models for multistrain pathogens
-
Lipsitch M, Colijn C, Cohen T, Hanage WP, Fraser C. 2009 No coexistence for free: neutral null models for multistrain pathogens. Epidemics 1, 2-13. (doi:10.1016/j.epidem.2008.07.001)
-
(2009)
Epidemics
, vol.1
, pp. 2-13
-
-
Lipsitch, M.1
Colijn, C.2
Cohen, T.3
Hanage, W.P.4
Fraser, C.5
-
16
-
-
2542421890
-
Short- and long-term effects of pneumococcal conjugate vaccination of children on penicillin resistance. Antimicrob
-
Temime L, Guillemot D, Boelle PY. 2004 Short- and long-term effects of pneumococcal conjugate vaccination of children on penicillin resistance. Antimicrob. Agents Chemother. 48, 2206-2213. (doi:10.1128/AAC.48.6.2206-2213.2004)
-
(2004)
Agents Chemother
, vol.48
, pp. 2206-2213
-
-
Temime, L.1
Guillemot, D.2
Boelle, P.Y.3
-
17
-
-
55149092744
-
An easy method for detection of nasopharyngeal carriage of multiple Streptococcus pneumoniae serotypes
-
Kaltoft MS, Skov Sorensen UB, Slotved HC, Konradsen HB. 2008 An easy method for detection of nasopharyngeal carriage of multiple Streptococcus pneumoniae serotypes. J. Microbiol. Methods 75, 540-544. (doi:10.1016/j.mimet.2008. 08.010)
-
(2008)
J. Microbiol. Methods
, vol.75
, pp. 540-544
-
-
Kaltoft, M.S.1
Skov Sorensen, U.B.2
Slotved, H.C.3
Konradsen, H.B.4
-
18
-
-
0036792191
-
Pilot study of the genetic diversity of the pneumococcal nasopharyngeal flora among children attending day care centers
-
Sa-Leao R, Tomasz A, Santos Sanches I, de Lencastre H. 2002 Pilot study of the genetic diversity of the pneumococcal nasopharyngeal flora among children attending day care centers. J. Clin. Microbiol. 40, 3577-3585. (doi:10.1128/jcm.40.10.3577-3585.2002)
-
(2002)
J. Clin. Microbiol
, vol.40
, pp. 3577-3585
-
-
Sa-Leao, R.1
Tomasz, A.2
Santos Sanches, I.3
De Lencastre, H.4
-
19
-
-
73949157089
-
Between-strain competition in acquisition and clearance of pneumococcal carriage—epidemiologic evidence from a longitudinal study of day-care children
-
Auranen K, Mehtala J, Tanskanen A, Kaltoft MS. 2010 Between-strain competition in acquisition and clearance of pneumococcal carriage—epidemiologic evidence from a longitudinal study of day-care children. Am. J. Epidemiol. 171, 169-176. (doi:10. 1093/aje/kwp351)
-
(2010)
Am. J. Epidemiol
, vol.171
, pp. 169-176
-
-
Auranen, K.1
Mehtala, J.2
Tanskanen, A.3
Kaltoft, M.S.4
-
20
-
-
84879889202
-
Competition between Streptococcus pneumoniae strains: Implications for vaccine-induced replacement in colonization and disease
-
Mehtala J, Antonio M, Kaltoft MS, O'Brien KL, Auranen K. 2013 Competition between Streptococcus pneumoniae strains: implications for vaccine-induced replacement in colonization and disease. Epidemiology 24, 522-529. (doi:10.1097/ EDE.0b013e318294be89)
-
(2013)
Epidemiology
, vol.24
, pp. 522-529
-
-
Mehtala, J.1
Antonio, M.2
Kaltoft, M.S.3
O'brien, K.L.4
Auranen, K.5
-
21
-
-
84901191236
-
Estimating the transmission dynamics of Streptococcus pneumoniae from strain prevalence data
-
Numminen E, Cheng L, Gyllenberg M, Corander J. 2013 Estimating the transmission dynamics of Streptococcus pneumoniae from strain prevalence data. Biometrics 69, 748-757. (doi:10.1111/ biom.12040)
-
(2013)
Biometrics
, vol.69
, pp. 748-757
-
-
Numminen, E.1
Cheng, L.2
Gyllenberg, M.3
Corander, J.4
-
22
-
-
53349153976
-
Indirect effect of 7-valent pneumococcal conjugate vaccine on pneumococcal colonization among unvaccinated household members
-
Millar EV, Watt JP, Bronsdon MA, Dallas J, Reid R, Santosham M, O'Brien KL. 2008 Indirect effect of 7-valent pneumococcal conjugate vaccine on pneumococcal colonization among unvaccinated household members. Clin. Infect. Dis. 47, 989-996. (doi:10.1086/591966)
-
(2008)
Clin. Infect. Dis
, vol.47
, pp. 989-996
-
-
Millar, E.V.1
Watt, J.P.2
Bronsdon, M.A.3
Dallas, J.4
Reid, R.5
Santosham, M.6
O'brien, K.L.7
-
23
-
-
84862244127
-
Bentley SD. 2012 Streptococcus pneumoniae: The evolution of antimicrobial resistance to beta-lactams, fluoroquinolones and macrolides
-
Cornick JE, Bentley SD. 2012 Streptococcus pneumoniae: the evolution of antimicrobial resistance to beta-lactams, fluoroquinolones and macrolides. Microb. Infect. 14, 573-583. (doi:10. 1016/j.micinf.2012.01.012)
-
Microb. Infect
, vol.14
, pp. 573-583
-
-
Cornick, J.E.1
-
24
-
-
33645505114
-
Effect of introduction of the pneumococcal conjugate vaccine on drug-resistant Streptococcus pneumoniae
-
Kyaw MH et al. 2006 Effect of introduction of the pneumococcal conjugate vaccine on drug-resistant Streptococcus pneumoniae. N. Engl. J. Med. 354, 1455-1463. (doi:10.1056/NEJMoa051642)
-
(2006)
N. Engl. J. Med
, vol.354
, pp. 1455-1463
-
-
Kyaw, M.H.1
-
25
-
-
33846439743
-
Diversity and antibiotic resistance among nonvaccine serotypes of Streptococcus pneumoniae carriage isolates in the post-heptavalent conjugate vaccine era
-
Hanage WP, Huang SS, Lipsitch M, Bishop CJ, Godoy D, Pelton SI, Goldstein R, Huot H, Finkelstein JA. 2007 Diversity and antibiotic resistance among nonvaccine serotypes of Streptococcus pneumoniae carriage isolates in the post-heptavalent conjugate vaccine era. J. Infect. Dis. 195, 347-352. (doi:10.1086/510249)
-
(2007)
J. Infect. Dis
, vol.195
, pp. 347-352
-
-
Hanage, W.P.1
Huang, S.S.2
Lipsitch, M.3
Bishop, C.J.4
Godoy, D.5
Pelton, S.I.6
Goldstein, R.7
Huot, H.8
Finkelstein, J.A.9
-
26
-
-
34249813721
-
Emergence of 19A as virulent and multidrug resistant Pneumococcus in Massachusetts following universal immunization of infants with pneumococcal conjugate vaccine
-
Pelton SI, Huot H, Finkelstein JA, Bishop CJ, Hsu KK, Kellenberg J, Huang SS, Goldstein R, Hanage WP. 2007 Emergence of 19A as virulent and multidrug resistant Pneumococcus in Massachusetts following universal immunization of infants with pneumococcal conjugate vaccine. Pediatr. Infect. Dis. J. 26, 468-472. (doi:10.1097/INF.0b013e31803df9ca)
-
(2007)
Pediatr. Infect. Dis. J
, vol.26
, pp. 468-472
-
-
Pelton, S.I.1
Huot, H.2
Finkelstein, J.A.3
Bishop, C.J.4
Hsu, K.K.5
Kellenberg, J.6
Huang, S.S.7
Goldstein, R.8
Hanage, W.P.9
-
27
-
-
34250754425
-
Adaptive explicit-implicit tau-leaping method with automatic tau selection
-
Cao Y, Gillespie DT, Petzold LR. 2007 Adaptive explicit-implicit tau-leaping method with automatic tau selection. J. Chem. Phys. 126, 224101. (doi:10.1063/1.2745299)
-
(2007)
J. Chem. Phys
, vol.126
, pp. 224101
-
-
Cao, Y.1
Gillespie, D.T.2
Petzold, L.R.3
-
28
-
-
84902654115
-
The impact of specific and non-specific immunity on the ecology of Streptococcus pneumoniae and the implications for vaccination
-
Flasche S, Edmunds WJ, Miller E, Goldblatt D, Robertson C, Choi YH. 2013 The impact of specific and non-specific immunity on the ecology of Streptococcus pneumoniae and the implications for vaccination. Proc. R. Soc. B 280, 20131939. (doi:10.1098/rspb.2013.1939)
-
(2013)
Proc. R. Soc. B
, vol.280
, pp. 20131939
-
-
Flasche, S.1
Edmunds, W.J.2
Miller, E.3
Goldblatt, D.4
Robertson, C.5
Choi, Y.H.6
-
29
-
-
84858339217
-
Niche and neutral effects of acquired immunity permit coexistence of pneumococcal serotypes
-
Cobey S, Lipsitch M. 2012 Niche and neutral effects of acquired immunity permit coexistence of pneumococcal serotypes. Science 335, 1376-1380. (doi:10.1126/science.1215947)
-
(2012)
Science
, vol.335
, pp. 1376-1380
-
-
Cobey, S.1
Lipsitch, M.2
-
30
-
-
84899770571
-
A mathematical model of serotype replacement in pneumococcal carriage following vaccination
-
Bottomley C, Roca A, Hill PC, Greenwood B, Isham V. 2013 A mathematical model of serotype replacement in pneumococcal carriage following vaccination. J. R. Soc. Interface 10, 20130786. (doi:10.1098/rsif.2013.0786)
-
(2013)
J. R. Soc. Interface
, vol.10
, pp. 20130786
-
-
Bottomley, C.1
Roca, A.2
Hill, P.C.3
Greenwood, B.4
Isham, V.5
-
31
-
-
33846647401
-
Increased antimicrobial resistance among nonvaccine serotypes of Streptococcus pneumoniae in the pediatric population after the introduction of 7-valent pneumococcal vaccine in the United States
-
Farrell DJ, Klugman KP, Pichichero M. 2007 Increased antimicrobial resistance among nonvaccine serotypes of Streptococcus pneumoniae in the pediatric population after the introduction of 7-valent pneumococcal vaccine in the United States. Pediatr. Infect. Dis. J. 26, 123-128. (doi:10.1097/ 01.inf.0000253059.84602.c3)
-
(2007)
Pediatr. Infect. Dis. J
, vol.26
, pp. 123-128
-
-
Farrell, D.J.1
Klugman, K.P.2
Pichichero, M.3
-
32
-
-
82455167938
-
Clonal replacement among 19A Streptococcus pneumoniae in Massachusetts, prior to 13 valent conjugate vaccination
-
Hanage WP, Bishop CJ, Lee GM, Lipsitch M, Stevenson A, Rifas-Shiman SL, Pelton SI, Huang SS, Finkelstein JA. 2011 Clonal replacement among 19A Streptococcus pneumoniae in Massachusetts, prior to 13 valent conjugate vaccination. Vaccine 29, 8877-8881. (doi:10.1016/j.vaccine.2011.09.075)
-
(2011)
Vaccine
, vol.29
, pp. 8877-8881
-
-
Hanage, W.P.1
Bishop, C.J.2
Lee, G.M.3
Lipsitch, M.4
Stevenson, A.5
Rifas-Shiman, S.L.6
Pelton, S.I.7
Huang, S.S.8
Finkelstein, J.A.9
-
33
-
-
84897135598
-
Clonal expansion of the macrolide resistant ST386 within pneumococcal serotype 6C in France
-
Janoir C, Cohen R, Levy C, Bingen E, Lepoutre A, Gutmann L, Varon E, Observatoires Regionaux du Pneumocoque network. 2014 Clonal expansion of the macrolide resistant ST386 within pneumococcal serotype 6C in France. PLoS ONE 9, e90935. (doi:10.1371/journal.pone.0090935)
-
(2014)
Plos ONE 9
-
-
Janoir, C.1
Cohen, R.2
Levy, C.3
Bingen, E.4
Lepoutre, A.5
Gutmann, L.6
Varon, E.7
Network, O.R.D.P.8
-
34
-
-
84855892497
-
Prevention of antibiotic-nonsusceptible Streptococcus pneumoniae with conjugate vaccines
-
Hampton LM et al. 2012 Prevention of antibiotic-nonsusceptible Streptococcus pneumoniae with conjugate vaccines. J. Infect. Dis. 205, 401-411. (doi:10.1093/infdis/jir755)
-
(2012)
J. Infect. Dis
, vol.205
, pp. 401-411
-
-
Hampton, L.M.1
-
35
-
-
78649698890
-
Serotype specific invasive capacity and persistent reduction in invasive pneumococcal disease
-
Yildirim I et al. 2010 Serotype specific invasive capacity and persistent reduction in invasive pneumococcal disease. Vaccine 29, 283-288. (doi:10.1016/j.vaccine.2010.10.032)
-
(2010)
Vaccine
, vol.29
, pp. 283-288
-
-
Yildirim, I.1
|