Confirming a major QTL and finding additional loci responsible for field resistance to brown spot (Bipolaris oryzae) in rice

Breeding Science

Volumn 65, Issue 2, 2015, Pages 170-175

  Sato, Hiroyuki ^a   Matsumoto, Kengo ^b   Ota, Chihiro ^b   Yamakawa, Tomohiro ^b   Kihara, Junichi ^c   Mizobuchi, Ritsuko ^d  

^a FOOD RESEARCH INSTITUTE   (Japan)

^b Mie Prefecture Agricultural Research Institute   (Japan)

^c SHIMANE UNIVERSITY   (Japan)

^d NATIONAL INSTITUTE OF AGROBIOLOGICAL SCIENCES   (Japan)

Author keywords

Bipolaris oryzae; Brown spot; Field resistance; Oryza sativa L; QTL analysis; Rice

Indexed keywords

BIPOLARIS ORYZAE; ORYZA SATIVA; PUNCTUM BLANDIANUM;

EID: 84928647244     PISSN: 13447610     EISSN: 13473735     Source Type: Journal    
DOI: 10.1270/jsbbs.65.170     Document Type: Article

References (24)

1. Datnoff, L.E., R.N. Raid, G.H. Snyder and D.B. Jones (1991) Effect of calcium silicate on blast and brown spot intensities of rice. Plant Dis. 75: 729-732.
2. Deren, C.W., L.E. Datnoff, G.H. Snyder and F.G. Martin (1994) Silicon concentration, disease response and yield components of rice genotypes grown on flooded organic Histosol. Crop Sci. 34: 733-737.
3. Dupuis, J. and D. Siegmund (1999) Statistical methods for mapping quantitative trait lici from a dense set of markers. Genetics 151: 373-386.
4. Ebana, K., J. Yonemaru, S. Fukuoka, H. Iwata, H. Kanamori, N. Namiki, H. Nagasaki and M. Yano (2010) Genetic structure revealed by a whole-genome single-nucleotide polymorphism survey of diverse accessions of cultivated Asian rice (Oryza sativa L.). Breed. Sci. 60: 390-397.
5. Eruotor, P.G. (1985) Varietal reaction of rice to isolates of Cochliobolus miyabeanus. Indian Phytopath. 39: 62-64.
6. JPPA (2013) Epidemic and controlling areas in 2012. In: Japan Plant Protection Association (eds.) Catalogue of agricultural chemicals, Tokyo, pp. 572-574.
7. Katara, J.L., H. Sonah, R.K. Deshmukh, R. Chaurasia and A.S. Kotasthane (2010) Molecular analysis of QTLs associated with resistance to brown spot in rice (Oryza sativa L.). Indian J. Genet. 70: 17-21.
8. Kihara, J. and T. Kumagai (1994) Ecotypes of the fungus Bipolaris oryzae with various responses of the mycochrome system. Physiol. Plant. 92: 689-695.
9. Lander, E.S., P. Green, J. Abrahamson, A. Barlow, M.J. Daly, S.E. Lincoln and T. Etoh (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1: 174-181.
10. Liu, R.H. and J.L. Meng (2003) MapDraw: a Microsoft Excel macro for drawing genetic linkage maps based on given genetic linkage data. Heraditas 25: 317-321.
11. Matsumoto, K., C. Ota, T. Yamakawa and H. Sato (2014) A new method for evaluating field resistance to brown spot in rice and selection of standard rice varieties for evaluating the resistance. Breed. Res. 16 (Suppl. 1): 109.
12. Misra, A.K. (1985) Effect of intercepting populations of resistant cultivars on reducing brown spot disease build up in a susceptible rice cultivar. Indian Phytopath. 38: 66-69.
13. Murray, M.G. and W.F. Thompson (1980) Rapid isolation of highmolecular-weight plant DNA. Nucleic Acids Res. 8: 4321-4325.
14. Nagasawa, Y. (2009) A core technology of low-input sustainable agriculture, Koshihikari BL. In: Kubota co. (eds.) U, dreaming of agriculture, Hyogo, West Japan ver. 20. pp. 3-4.
15. NCRC (2010) Silicon amendments stabilized the effect of fungicide to brown spot disease in rice. Niigata prefecture agriculture forest and fisheries research results information. http://www.ari.pref.niigata. jp/nourinsui/seika10/index.html.
16. Ohata, K. and C. Kubo (1974) Studies on the mechanism of disease resistance of rice varieties to Cochliobolus miyabeanus. Bull. Shikoku Agric. Exp. Stn. 28: 17-57.
17. Padmanabhan, S.Y. (1973) The great Bengal famine. Annu. Rev. Phytopathol. 11: 11-26.
18. Sato, H., I. Ando, H. Hirabayashi, Y. Takeuchi, S. Arase, J. Kihara, H. Kato, T. Imbe and H. Nemoto (2008a) QTL analysis of brown spot resistance in rice (Oryza sativa L.). Breed. Sci. 58: 93-96.
19. Sato, H., I. Ando, Y. Takeuchi, H. Hirabayashi, S. Arase, J. Kihara and H. Nemoto (2008b) Genetic analysis of brown spot resistance in rice using the 39 chromosome segment substitution lines (CSSLs) derived from crossing Koshihikari and Kasalath. Breed. Res. 10 (Suppl. 1): 274.
20. Sreegharan, A. and M.R. Menon (1974) Studies on the isolates of Helminthosporium oryzae. Indian Phytopath. 27: 131-133.
21. Wang, S., C.J. Basten and Z.-B. Zeng (2006) Windows QTL Cartographer 2.5. Department of Statistics, North Carolina State University, Raleigh, NC. http://statgen.ncsu.edu/qtlcart/WQTLCart.htm. Cited 23 Oct 2006.
22. Yamaguchi, J., M. Matsuzaki and M. Inada (1992) An epiphytoic of brown spot at seedling in Saga prefecture in 1991. Kyushu Agric. Res. 54: 81.
23. Yamaguchi, Y., K. Nakano and R. Saito (2007) An outbreak of rice brown spot at Niigata prefecture Kaetsu district in 2005 and 2006. The Association for Plant Protection of Hokuriku 59: 4.
24. Yoshii, H. and M. Matsumoto (1951) Studies on the resistance to Helminthosporiose of the rice varieties introduced to Japan (1). Bull. Matsuyama Agric. College 6: 25-60.