-
2
-
-
44349142832
-
Gene regulation ontology (GRO): Design principles and use cases
-
Gothenburg, Sweden
-
Elena Beisswanger, Vivian Lee, Jung-jae Kim, Dietrich Rebholz-Schuhmann, Andrea Splendiani, Olivier Dameron, Stefan Schulz, and Udo Hahn. 2008. Gene Regulation Ontology (GRO): Design principles and use cases. In MIE 2008 - Proceedings of the 21st International Congress of the European Federation for Medical Informatics, pages 9-14. Gothenburg, Sweden.
-
(2008)
MIE 2008 - Proceedings of the 21st International Congress of the European Federation for Medical Informatics
, pp. 9-14
-
-
Beisswanger, E.1
Lee, V.2
Kim, J.-J.3
Rebholz-Schuhmann, D.4
Splendiani, A.5
Dameron, O.6
Schulz, S.7
Hahn, U.8
-
3
-
-
16244423656
-
Comparative experiments on learning information extractors for proteins and their interactions
-
Razvan Bunescu, Ruifang Ge, Rohit J. Kate, Edward M. Marcotte, Raymond J. Mooney, Arun K. Ramani, and Yuk Wah Wong. 2005. Comparative experiments on learning information extractors for proteins and their interactions. Artificial Intelligence in Medicine, 33(2):139-155.
-
(2005)
Artificial Intelligence in Medicine
, vol.33
, Issue.2
, pp. 139-155
-
-
Bunescu, R.1
Ge, R.2
Kate, R.J.3
Marcotte, E.M.4
Mooney, R.J.5
Ramani, A.K.6
Wong, Y.W.7
-
5
-
-
77950347191
-
Event extraction from trimmed dependency graphs
-
Boulder, Colorado, June. Association for Computational Linguistics
-
Ekaterina Buyko, Erik Faessler, Joachim Wermter, and Udo Hahn. 2009. Event extraction from trimmed dependency graphs. In Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task, pages 19-27, Boulder, Colorado, June. Association for Computational Linguistics.
-
(2009)
Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task
, pp. 19-27
-
-
Buyko, E.1
Faessler, E.2
Wermter, J.3
Hahn, U.4
-
6
-
-
84872966655
-
BIOFRAMENET: A domain-specific FRAMENET extension with links to biomedical ontologies
-
Baltimore, MD, USA
-
Andrew E. Dolbey, Michael Ellsworth, and Jan Scheffczyk. 2006. BIOFRAMENET: A domain-specific FRAMENET extension with links to biomedical ontologies. In Proceedings of the "Biomedical Ontology in Action" Workshop at KR-MED 2006, pages 87-94. Baltimore, MD, USA.
-
(2006)
Proceedings of the "Biomedical Ontology in Action" Workshop at KR-MED 2006
, pp. 87-94
-
-
Dolbey, A.E.1
Ellsworth, M.2
Scheffczyk, J.3
-
7
-
-
33847294345
-
RELEX - Relation extraction using dependency parse trees
-
Katrin Fundel, Robert Küffner, and Ralf Zimmer. 2007. RELEX - relation extraction using dependency parse trees. Bioinformatics, 23(3):365-371.
-
(2007)
Bioinformatics
, vol.23
, Issue.3
, pp. 365-371
-
-
Fundel, K.1
Küffner, R.2
Zimmer, R.3
-
8
-
-
40749087717
-
Corpus annotation for mining biomedical events from literature
-
Jin-Dong Kim, Tomoko Ohta, and Jun'ichi Tsujii. 2008. Corpus annotation for mining biomedical events from literature. BMC Bioinformatics, 9(10).
-
(2008)
BMC Bioinformatics
, vol.9
, Issue.10
-
-
Kim, J.-D.1
Ohta, T.2
Tsujii, J.3
-
9
-
-
85104042765
-
Overview of BIONLP'09 shared task on event extraction
-
Boulder, CO, USA
-
Jin-Dong Kim, Tomoko Ohta, Sampo Pyysalo, Yoshinobu Kano, and Jun'ichi Tsujii. 2009. Overview of BIONLP'09 shared task on event extraction. In Proceedings of the BioNLP 2009 Workshop - Companion Volume for Shared Task, pages 1-9. Boulder, CO, USA.
-
(2009)
Proceedings of the BioNLP 2009 Workshop - Companion Volume for Shared Task
, pp. 1-9
-
-
Kim, J.-D.1
Ohta, T.2
Pyysalo, S.3
Kano, Y.4
Tsujii, J.5
-
10
-
-
84920708072
-
Class-based construction of a verb lexicon
-
Austin, TX, USA
-
Karin Kipper, Hoa Trang Dang, and Martha Stone Palmer. 2000. Class-based construction of a verb lexicon. In AAAI/IAAI 2000 - Proceedings of the 17th National Conference on Artificial Intelligence and 12th Conference on Innovative Applications of Artificial Intelligence, pages 691-696. Austin, TX, USA.
-
(2000)
AAAI/IAAI 2000 - Proceedings of the 17th National Conference on Artificial Intelligence and 12th Conference on Innovative Applications of Artificial Intelligence
, pp. 691-696
-
-
Kipper, K.1
Dang, H.T.2
Palmer, M.S.3
-
11
-
-
33750727188
-
The NOMBANK project: An interim report
-
Boston, MA, USA
-
Adam Meyers, Ruth Reeves, Catherine Macleod, Rachel Szekely, Veronika Zielinska, Brian Young, and Ralph Grishman. 2004. The NOMBANK project: An interim report. In Proceedings of the Workshop on "Frontiers in Corpus Annotation" at HLT-NAACL 2004, pages 24-31. Boston, MA, USA.
-
(2004)
Proceedings of the Workshop on "Frontiers in Corpus Annotation" at HLT-NAACL 2004
, pp. 24-31
-
-
Meyers, A.1
Reeves, R.2
Macleod, C.3
Szekely, R.4
Zielinska, V.5
Young, B.6
Grishman, R.7
-
13
-
-
33645983416
-
The proposition bank: An annotated corpus of semantic roles
-
Martha S. Palmer, Daniel Gildea, and Paul Kingsbury. 2005. The Proposition Bank: An annotated corpus of semantic roles. Computational Linguistics, 31(1):71-106.
-
(2005)
Computational Linguistics
, vol.31
, Issue.1
, pp. 71-106
-
-
Palmer, M.S.1
Gildea, D.2
Kingsbury, P.3
-
14
-
-
33847608309
-
BIOINFER: A corpus for information extraction in the biomedical domain
-
Sampo Pyysalo, Filip Ginter, Juho Heimonen, Jari Björne, Jorma Boberg, Jouni Jarvinen, and Tapio Salakoski. 2007. BIOINFER: A corpus for information extraction in the biomedical domain. Bioinformatics, 8(50).
-
(2007)
Bioinformatics
, vol.8
, Issue.50
-
-
Pyysalo, S.1
Ginter, F.2
Heimonen, J.3
Björne, J.4
Boberg, J.5
Jarvinen, J.6
Salakoski, T.7
-
15
-
-
44649108373
-
Comparative analysis of five protein-protein interaction corpora
-
April
-
Sampo Pyysalo, Antti Airola, Juho Heimonen, Jari Björne, Filip Ginter, and Tapio Salakoski. 2008. Comparative analysis of five protein-protein interaction corpora. BMC Bioinformatics, 9(3), April.
-
(2008)
BMC Bioinformatics
, vol.9
, Issue.3
-
-
Pyysalo, S.1
Airola, A.2
Heimonen, J.3
Björne, J.4
Ginter, F.5
Salakoski, T.6
-
16
-
-
84874285402
-
BIOLEXICON: A lexical resource for the biology domain
-
Turku, Finland
-
Yutaka Sasaki, Simonetta Montemagni, Piotr Pezik, Dietrich Rebholz-Schuhmann, John McNaught, and Sophia Ananiadou. 2008. BIOLEXICON: A lexical resource for the biology domain. In SMBM 2008 - Proceedings of the 3rd International Symposium on Semantic Mining in Biomedicine, pages 109-116. Turku, Finland.
-
(2008)
SMBM 2008 - Proceedings of the 3rd International Symposium on Semantic Mining in Biomedicine
, pp. 109-116
-
-
Sasaki, Y.1
Montemagni, S.2
Pezik, P.3
Rebholz-Schuhmann, D.4
McNaught, J.5
Ananiadou, S.6
-
17
-
-
71749121869
-
Construction of an annotated corpus to support biomedical information extraction
-
Paul Thompson, Syed A Iqbal, John McNaught, and Sophia Ananiadou. 2009. Construction of an annotated corpus to support biomedical information extraction. BMC Bioinformatics, 10(349).
-
(2009)
BMC Bioinformatics
, vol.10
, Issue.349
-
-
Thompson, P.1
Iqbal, S.A.2
McNaught, J.3
Ananiadou, S.4
-
18
-
-
84885787238
-
Bridging the gap between domain-oriented and linguistically-oriented semantics
-
Boulder, CO, USA
-
Sumire Uematsu, Jin-Dong Kim, and Jun'ichi Tsujii. 2009. Bridging the gap between domain-oriented and linguistically-oriented semantics. In Proceedings of the BioNLP 2009 Workshop, pages 162-170. Boulder, CO, USA.
-
(2009)
Proceedings of the BioNLP 2009 Workshop
, pp. 162-170
-
-
Uematsu, S.1
Kim, J.-D.2
Tsujii, J.3
-
19
-
-
13244267011
-
PASBIO: Predicate-argument structures for event extraction in molecular biology
-
Tuangthong Wattarujeekrit, Parantu Shah, and Nigel Collier. 2004. PASBIO: Predicate-argument structures for event extraction in molecular biology. BMC Bioinformatics, 5(155).
-
(2004)
BMC Bioinformatics
, vol.5
, Issue.155
-
-
Wattarujeekrit, T.1
Shah, P.2
Collier, N.3
|