The subgingival microbiome of clinically healthy current and never smokers

ISME Journal

Volumn 9, Issue 1, 2015, Pages 268-272

  Mason, Matthew R ^a   Preshaw, Philip M ^b   Nagaraja, Haikady N ^a   Dabdoub, Shareef M ^a   Rahman, Anis ^b   Kumar, Purnima S ^a  

^a OHIO STATE UNIVERSITY   (United States)

^b NEWCASTLE UNIVERSITY   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS);

CLASSIFICATION; FEMALE; GENETICS; GINGIVA; GINGIVITIS; GRAM NEGATIVE ANAEROBIC BACTERIA; HUMAN; ISOLATION AND PURIFICATION; MICROBIOLOGY; MICROFLORA; PHYLOGENY; SMOKING; TOOTH PLAQUE;

DENTAL PLAQUE; FEMALE; GINGIVA; GINGIVITIS; GRAM-NEGATIVE ANAEROBIC BACTERIA; HUMANS; MICROBIOTA; PHYLOGENY; SMOKING;

EID: 84927693091     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2014.114     Document Type: Article

References (26)

1. Abt MC, Pamer EG. (2014). Commensal bacteria mediated defenses against pathogens. Curr Opin Immunol 29C: 16-22.
2. Aruni AW, Roy F, Fletcher HM. (2011). Filifactor alocis has virulence attributes that can enhance its persistence under oxidative stress conditions and mediate invasion of epithelial cells by porphyromonas gingivalis. Infect Immun 79: 3872-3886.
3. Benedetti G, Campus G, Strohmenger L, Lingstrom P. (2013). Tobacco and dental caries: a systematic review. Acta Odontol Scand 71: 363-371.
4. Brockhurst MA, Colegrave N, Hodgson DJ, Buckling A. (2007). Niche occupation limits adaptive radiation in experimental microcosms. PLoS One 2: e193.
5. Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK et al. (2010). QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7: 335-336.
6. DeSantis TZ, Hugenholtz P, Larsen N, Rojas M, Brodie EL, Keller K et al. (2006). Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol 72: 5069-5072.
7. Dowd SE, Sun Y, Wolcott RD, Domingo A, Carroll JA. (2008). Bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP) for microbiome studies: bacterial diversity in the ileum of newly weaned Salmonellainfected pigs. Foodborne Pathog Dis 5: 459-472.
8. Eke PI, Dye BA, Wei L, Thornton-Evans GO, Genco RJCDC Periodontal Disease Surveillance workgroup (2012). Prevalence of periodontitis in adults in the United States: 2009 and 2010. J Dent Res 91: 914-920.
9. Emerson BC, Kolm N. (2005). Species diversity can drive speciation. Nature 434: 1015-1017.
10. Giovannucci E. (2001). An updated review of the epidemiological evidence that cigarette smoking increases risk of colorectal cancer. Cancer Epidemiol Biomarkers Prev 10: 725-731.
11. Griffen AL, Beall CJ, Campbell JH, Firestone ND, Kumar PS, Yang ZK et al. (2012). Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing. ISME J 6: 1176-1185.
12. Gross EL, Leys EJ, Gasparovich SR, Firestone ND, Schwartzbaum JA, Janies DA et al. (2010). Bacterial 16S sequence analysis of severe caries in young permanent teeth. J Clin Microbiol 48: 4121-4128.
13. Kumar PS, Brooker MR, Dowd SE, Camerlengo T. (2011a). Target region selection is a critical determinant of community fingerprints generated by 16S pyrosequencing. PLoS One 6: e20956.
14. Kumar PS, Matthews CR, Joshi V, de Jager M, Aspiras M. (2011b). Tobacco smoking affects bacterial acquisition and colonization in oral biofilms. Infect Immun 79: 4730-4738.
15. Kumar PS, Mason MR, Brooker MR, O'Brien K. (2012). Pyrosequencing reveals unique microbial signatures associated with healthy and failing dental implants. J Clin Periodontol 39: 425-433.
16. Kumar PS, Griffen AL, Moeschberger ML, Leys EJ. (2005). Identification of candidate periodontal pathogens and benficial species using quantitative 16S clonal analysis. J Clin Microbiol 43: 3944-3955.
17. Listgarten MA. (1976). Structure of the microbial flora associated with periodontal health and disease in man. A light and electron microscopic study. J Periodontol 47: 1-18.
18. Loe H, Silness J. (1963). Periodontal disease in pregnancy. I. Prevalence and severity. Acta Odontol Scand 21: 533-551.
19. Loe H, Theilade E, Jensen SB. (1965). Experimental gingivitis in man. J Periodontol 36: 177-187.
20. Loesche WJ, Syed SA. (1978). Bacteriology of human experimental gingivitis: effect of plaque and gingivitis score. Infect Immun 21: 830-839.
21. Marsh PD. (2003). Are dental diseases examples of ecological catastrophes? Microbiology 149: 279-294.
22. Mason MR, Nagaraja HN, Camerlengo T, Joshi V, Kumar PS. (2013). Deep sequencing identifies ethnicity-specific bacterial signatures in the oral microbiome. PLoS One 8: e77287.
23. Rubinstein MR, Wang X, Liu W, Hao Y, Cai G, Han YW. (2013). Fusobacterium nucleatum promotes colorectal carcinogenesis by modulating E-cadherin/b-catenin signaling via its FadA adhesin. Cell Host Microbe 14: 195-206.
24. Shaddox LM, Huang H, Lin T, HouW, Harrison PL, Aukhil I et al. (2012). Microbiological characterization in children with aggressive periodontitis. J Dent Res 91: 927-933.
25. Shchipkova AY, Nagaraja HN, Kumar PS. (2010). Subgingival microbial profiles of smokers with periodontitis. J Dent Res 89: 1247-1253.
26. Tomar SL, Asma S. (2000). Smoking-attributable periodontitis in the United States: findings from NHANES III. National Health and Nutrition Examination Survey. J Periodontol 71: 743-751.