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Volumn 59, Issue 11, 2014, Pages 599-607

Resolving the genetic heterogeneity of prelingual hearing loss within one family: Performance comparison and application of two targeted next generation sequencing approaches

Author keywords

[No Author keywords available]

Indexed keywords

AMINOGLYCOSIDE; CADHERIN; GENTAMICIN; PENDRIN; PROTEIN; PROTEIN CDH23; RNA 12S; STREPTOMYCIN; UNCLASSIFIED DRUG; CARRIER PROTEIN; CDH23 PROTEIN, HUMAN; RIBOSOME RNA; RNA, RIBOSOMAL, 12S; SLC26A4 PROTEIN, HUMAN;

EID: 84927130784     PISSN: 14345161     EISSN: 1435232X     Source Type: Journal    
DOI: 10.1038/jhg.2014.78     Document Type: Article
Times cited : (13)

References (30)
  • 1
    • 0026410464 scopus 로고
    • Genetic epidemiology of hearing impairment
    • Morton, N. E. Genetic epidemiology of hearing impairment. Ann. N. Y. Acad. Sci. 630, 16-31 (1991).
    • (1991) Ann. N. Y. Acad. Sci , vol.630 , pp. 16-31
    • Morton, N.E.1
  • 2
    • 33646706079 scopus 로고    scopus 로고
    • Newborn hearing screening - A silent revolution
    • Morton, C. C., Nance, W. E. Newborn hearing screening-a silent revolution. N. Engl. J. Med. 354, 2151-2164 (2006).
    • (2006) N. Engl. J. Med , vol.354 , pp. 2151-2164
    • Morton, C.C.1    Nance, W.E.2
  • 3
    • 14744282666 scopus 로고    scopus 로고
    • Sensorineural hearing loss in children
    • Smith, R. J., Bale, J. F. Jr., White, K. R. Sensorineural hearing loss in children. Lancet 365, 879-890 (2005).
    • (2005) Lancet , vol.365 , pp. 879-890
    • Smith, R.J.1    Bale, J.F.2    White, K.R.3
  • 4
    • 32044471289 scopus 로고    scopus 로고
    • From deafness genes to hearing mechanisms: Harmony and counterpoint
    • Petit, C. From deafness genes to hearing mechanisms: harmony and counterpoint. Trends Mol. Med. 12, 57-64 (2006).
    • (2006) Trends Mol. Med , vol.12 , pp. 57-64
    • Petit, C.1
  • 5
    • 0035775666 scopus 로고    scopus 로고
    • Usher syndrome: From genetics to pathogenesis
    • Petit, C. Usher syndrome: from genetics to pathogenesis. Annu. Rev. Genomics Hum. Genet. 2, 271-297 (2001).
    • (2001) Annu. Rev. Genomics Hum. Genet , vol.2 , pp. 271-297
    • Petit, C.1
  • 6
    • 79957911368 scopus 로고    scopus 로고
    • Current concepts in the treatment of retinitis pigmentosa
    • Musarella, M. A., Macdonald, I. M. Current concepts in the treatment of retinitis pigmentosa. J. Ophthalmol. 2011, 753547 (2011).
    • (2011) J. Ophthalmol , pp. 753547
    • Musarella, M.A.1    Macdonald, I.M.2
  • 8
    • 80052869041 scopus 로고    scopus 로고
    • Targeted genomic capture and massively parallel sequencing to identify genes for hereditary hearing loss in Middle Eastern families
    • Brownstein, Z., Friedman, L. M., Shahin, H., Oron-Karni, V., Kol, N., Abu Rayyan, A. et al. Targeted genomic capture and massively parallel sequencing to identify genes for hereditary hearing loss in Middle Eastern families. Genome Biol. 12, R89 (2011).
    • (2011) Genome Biol , vol.12 , pp. R89
    • Brownstein, Z.1    Friedman, L.M.2    Shahin, H.3    Oron-Karni, V.4    Kol, N.5    Abu Rayyan, A.6
  • 9
    • 84863002929 scopus 로고    scopus 로고
    • A low-cost exon capture method suitable for large-scale screening of genetic deafness by the massively-parallel sequencing approach
    • Tang, W., Qian, D., Ahmad, S., Mattox, D., Todd, N. W., Han, H. et al. A low-cost exon capture method suitable for large-scale screening of genetic deafness by the massively-parallel sequencing approach. Genet. Test. Mol. Biomarkers 16, 536-542 (2012).
    • (2012) Genet. Test. Mol. Biomarkers , vol.16 , pp. 536-542
    • Tang, W.1    Qian, D.2    Ahmad, S.3    Mattox, D.4    Todd, N.W.5    Han, H.6
  • 10
    • 84871704471 scopus 로고    scopus 로고
    • A sensitive and specific diagnostic test for hearing loss using a microdroplet PCR-based approach and next generation sequencing
    • Schrauwen, I., Sommen, M., Corneveaux, J. J., Reiman, R. A., Hackett, N. J., Claes, C. et al. A sensitive and specific diagnostic test for hearing loss using a microdroplet PCR-based approach and next generation sequencing. Am. J. Med. Genet. A. 161A, 145-152 (2013).
    • (2013) Am. J. Med. Genet. A. , vol.161 A , pp. 145-152
    • Schrauwen, I.1    Sommen, M.2    Corneveaux, J.J.3    Reiman, R.A.4    Hackett, N.J.5    Claes, C.6
  • 12
    • 84880184179 scopus 로고    scopus 로고
    • Wholeexome sequencing identifies MYO15A mutations as a cause of autosomal recessive nonsyndromic hearing loss in Korean families
    • Woo, H. M., Park, H. J., Baek, J. I., Park, M. H., Kim, U. K., Sagong, B. et al. Wholeexome sequencing identifies MYO15A mutations as a cause of autosomal recessive nonsyndromic hearing loss in Korean families. BMC Med. Genet. 14, 72 (2013).
    • (2013) BMC Med. Genet , vol.14 , pp. 72
    • Woo, H.M.1    Park, H.J.2    Baek, J.I.3    Park, M.H.4    Kim, U.K.5    Sagong, B.6
  • 14
    • 80052830541 scopus 로고    scopus 로고
    • Comparison of solution-based exome capture methods for next generation sequencing
    • Sulonen, A. M., Ellonen, P., Almusa, H., Lepisto, M., Eldfors, S., Hannula, S. et al. Comparison of solution-based exome capture methods for next generation sequencing. Genome Biol. 12, R94 (2011).
    • (2011) Genome Biol , vol.12 , pp. R94
    • Sulonen, A.M.1    Ellonen, P.2    Almusa, H.3    Lepisto, M.4    Eldfors, S.5    Hannula, S.6
  • 16
    • 84878244567 scopus 로고    scopus 로고
    • The carrier rate and mutation spectrum of genes associated with hearing loss in South China hearing female population of childbearing age
    • Yin, A., Liu, C., Zhang, Y., Wu, J., Mai, M., Ding, H. et al. The carrier rate and mutation spectrum of genes associated with hearing loss in South China hearing female population of childbearing age. BMC Med. Genet. 14, 57 (2013).
    • (2013) BMC Med. Genet , vol.14 , pp. 57
    • Yin, A.1    Liu, C.2    Zhang, Y.3    Wu, J.4    Mai, M.5    Ding, H.6
  • 17
    • 79960763462 scopus 로고    scopus 로고
    • DbNSFP: A lightweight database of human nonsynonymous SNPs and their functional predictions
    • Liu, X., Jian, X., Boerwinkle, E. dbNSFP: a lightweight database of human nonsynonymous SNPs and their functional predictions. Hum. Mutat. 32, 894-899 (2011).
    • (2011) Hum. Mutat , vol.32 , pp. 894-899
    • Liu, X.1    Jian, X.2    Boerwinkle, E.3
  • 18
    • 0032994602 scopus 로고    scopus 로고
    • Identification of two different mutations in the PDS gene in an inbred family with Pendred syndrome
    • Coucke, P. J., Van Hauwe, P., Everett, L. A., Demirhan, O., Kabakkaya, Y., Dietrich, N. L. et al. Identification of two different mutations in the PDS gene in an inbred family with Pendred syndrome. J. Med. Genet. 36, 475-477 (1999).
    • (1999) J. Med. Genet , vol.36 , pp. 475-477
    • Coucke, P.J.1    Van Hauwe, P.2    Everett, L.A.3    Demirhan, O.4    Kabakkaya, Y.5    Dietrich, N.L.6
  • 19
    • 70350118018 scopus 로고    scopus 로고
    • Comprehensive molecular etiology analysis of nonsyndromic hearing impairment from typical areas in China
    • Yuan, Y., You, Y., Huang, D., Cui, J., Wang, Y., Wang, Q. et al. Comprehensive molecular etiology analysis of nonsyndromic hearing impairment from typical areas in China. J. Transl. Med. 7, 79 (2009).
    • (2009) J. Transl. Med , vol.7 , pp. 79
    • Yuan, Y.1    You, Y.2    Huang, D.3    Cui, J.4    Wang, Y.5    Wang, Q.6
  • 20
    • 77951892218 scopus 로고    scopus 로고
    • Structural determinants of cadherin-23 function in hearing and deafness
    • Sotomayor, M., Weihofen, W. A., Gaudet, R., Corey, D. P. Structural determinants of cadherin-23 function in hearing and deafness. Neuron 66, 85-100 (2010).
    • (2010) Neuron , vol.66 , pp. 85-100
    • Sotomayor, M.1    Weihofen, W.A.2    Gaudet, R.3    Corey, D.P.4
  • 21
    • 81055156086 scopus 로고    scopus 로고
    • Allelic hierarchy of CDH23 mutations causing non-syndromic deafness DFNB12 or Usher syndrome USH1D in compound heterozygotes
    • Schultz, J. M., Bhatti, R., Madeo, A. C., Turriff, A., Muskett, J. A., Zalewski, C. K. et al. Allelic hierarchy of CDH23 mutations causing non-syndromic deafness DFNB12 or Usher syndrome USH1D in compound heterozygotes. J. Med. Genet. 48, 767-775 (2011).
    • (2011) J. Med. Genet , vol.48 , pp. 767-775
    • Schultz, J.M.1    Bhatti, R.2    Madeo, A.C.3    Turriff, A.4    Muskett, J.A.5    Zalewski, C.K.6
  • 22
    • 18444366182 scopus 로고    scopus 로고
    • CDH23 mutation and phenotype heterogeneity: A profile of 107 diverse families with Usher syndrome and nonsyndromic deafness
    • Astuto, L. M., Bork, J. M., Weston, M. D., Askew, J. W., Fields, R. R., Orten, D. J. et al. CDH23 mutation and phenotype heterogeneity: a profile of 107 diverse families with Usher syndrome and nonsyndromic deafness. Am. J. Hum. Genet. 71, 262-275 (2002).
    • (2002) Am. J. Hum. Genet , vol.71 , pp. 262-275
    • Astuto, L.M.1    Bork, J.M.2    Weston, M.D.3    Askew, J.W.4    Fields, R.R.5    Orten, D.J.6
  • 23
    • 84862777457 scopus 로고    scopus 로고
    • Applications of targeted gene capture and next-generation sequencing technologies in studies of human deafness and other genetic disabilities
    • Lin, X., Tang, W., Ahmad, S., Lu, J., Colby, C. C., Zhu, J. et al. Applications of targeted gene capture and next-generation sequencing technologies in studies of human deafness and other genetic disabilities. Hear. Res. 288, 67-76 (2012).
    • (2012) Hear. Res , vol.288 , pp. 67-76
    • Lin, X.1    Tang, W.2    Ahmad, S.3    Lu, J.4    Colby, C.C.5    Zhu, J.6
  • 24
    • 84880454318 scopus 로고    scopus 로고
    • Performance evaluation of the next-generation sequencing approach for molecular diagnosis of hereditary hearing loss
    • Sivakumaran, T. A., Husami, A., Kissell, D., Zhang, W., Keddache, M., Black, A. P. et al. Performance evaluation of the next-generation sequencing approach for molecular diagnosis of hereditary hearing loss. Otolaryngol. Head Neck Surg. 148, 1007-1016 (2013).
    • (2013) Otolaryngol. Head Neck Surg , vol.148 , pp. 1007-1016
    • Sivakumaran, T.A.1    Husami, A.2    Kissell, D.3    Zhang, W.4    Keddache, M.5    Black, A.P.6
  • 25
    • 79955483667 scopus 로고    scopus 로고
    • A framework for variation discovery and genotyping using next-generation DNA sequencing data
    • DePristo, M. A., Banks, E., Poplin, R., Garimella, K. V., Maguire, J. R., Hartl, C. et al. A framework for variation discovery and genotyping using next-generation DNA sequencing data. Nat. Genet. 43, 491-498 (2011).
    • (2011) Nat. Genet , vol.43 , pp. 491-498
    • Depristo, M.A.1    Banks, E.2    Poplin, R.3    Garimella, K.V.4    Maguire, J.R.5    Hartl, C.6
  • 26
    • 84868026566 scopus 로고    scopus 로고
    • A robust model for read count data in exome sequencing experiments and implications for copy number variant calling
    • Plagnol, V., Curtis, J., Epstein, M., Mok, K. Y., Stebbings, E., Grigoriadou, S. et al. A robust model for read count data in exome sequencing experiments and implications for copy number variant calling. Bioinformatics 28, 2747-2754 (2012).
    • (2012) Bioinformatics , vol.28 , pp. 2747-2754
    • Plagnol, V.1    Curtis, J.2    Epstein, M.3    Mok, K.Y.4    Stebbings, E.5    Grigoriadou, S.6
  • 27
    • 84863012272 scopus 로고    scopus 로고
    • Molecular diagnosis of infantile mitochondrial disease with targeted nextgeneration sequencing
    • Calvo, S. E., Compton, A. G., Hershman, S. G., Lim, S. C., Lieber, D. S., Tucker, E. J. et al. Molecular diagnosis of infantile mitochondrial disease with targeted nextgeneration sequencing. Sci. Transl. Med. 4, 118ra10 (2012).
    • (2012) Sci. Transl. Med , vol.4 , pp. 118ra10
    • Calvo, S.E.1    Compton, A.G.2    Hershman, S.G.3    Lim, S.C.4    Lieber, D.S.5    Tucker, E.J.6
  • 28
    • 0034114952 scopus 로고    scopus 로고
    • Maternally inherited hearing impairment
    • Van Camp, G., Smith, R. J. Maternally inherited hearing impairment. Clin Genet. 57, 409-414 (2000).
    • (2000) Clin Genet , vol.57 , pp. 409-414
    • Van Camp, G.1    Smith, R.J.2
  • 29
    • 84882724883 scopus 로고    scopus 로고
    • Diagnosis of mitochondrial disorders by concomitant next-generation sequencing of the exome and mitochondrial genome
    • Dinwiddie, D. L., Smith, L. D., Miller, N. A., Atherton, A. M., Farrow, E. G., Strenk, M. E. et al. Diagnosis of mitochondrial disorders by concomitant next-generation sequencing of the exome and mitochondrial genome. Genomics 102, 148-156 (2013).
    • (2013) Genomics , vol.102 , pp. 148-156
    • Dinwiddie, D.L.1    Smith, L.D.2    Miller, N.A.3    Atherton, A.M.4    Farrow, E.G.5    Strenk, M.E.6
  • 30
    • 70449339945 scopus 로고    scopus 로고
    • Microdroplet-based PCR enrichment for large-scale targeted sequencing
    • Tewhey, R., Warner, J. B., Nakano, M., Libby, B., Medkova, M., David, P. H. et al. Microdroplet-based PCR enrichment for large-scale targeted sequencing. Nat. Biotechnol. 27, 1025-1031 (2009).
    • (2009) Nat. Biotechnol , vol.27 , pp. 1025-1031
    • Tewhey, R.1    Warner, J.B.2    Nakano, M.3    Libby, B.4    Medkova, M.5    David, P.H.6


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