The effect of imipenem and diffusible signaling factors on the secretion of outer membrane vesicles and associated Ax21 proteins in Stenotrophomonas maltophilia

Frontiers in Microbiology

Volumn 6, Issue MAR, 2015, Pages

  Devos, Simon ^a   Van Oudenhove, Laurence ^a   Stremersch, Stephan ^a   Van Putte, Wouter ^a   De Rycke, Riet ^a,b   Van Driessche, Gonzalez ^a   Vitse, Jolien ^a   Raemdonck, Koen ^a   Devreese, Bart ^a  

^a GHENT UNIVERSITY   (Belgium)

^b DEPARTMENT OF PLANT SYSTEMS BIOLOGY   (Belgium)

Author keywords

Antibiotic resistance; Outer membrane vesicles; Proteomics; Quorum sensing; Stenotrophomonas maltophilia

Indexed keywords

AX21 PROTEIN; BACTERIAL PROTEIN; BETA LACTAMASE; IMIPENEM; METALLO BETA LACTAMASE; OUTER MEMBRANE PROTEIN; PEPTIDOGLYCAN; SERINE BETA LACTAMASE; UNCLASSIFIED DRUG;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL SECRETION SYSTEM; BACTERIAL VIRULENCE; BIOFILM; BURKHOLDERIA CENOCEPACIA; CONTROLLED STUDY; DIFFUSIBLE SIGNAL FACTOR QUORUM SENSING; LIQUID CHROMATOGRAPHY; MEMBRANE VESICLE; NONHUMAN; OUTER MEMBRANE VESICLE; PROTEIN ANALYSIS; PROTEIN ISOLATION; PROTEIN SYNTHESIS; PROTEOMICS; QUORUM SENSING; STENOTROPHOMONAS MALTOPHILIA; TIME OF FLIGHT MASS SPECTROMETRY; TRANSMISSION ELECTRON MICROSCOPY;

BURKHOLDERIA CENOCEPACIA; OAT MOSAIC VIRUS; STENOTROPHOMONAS MALTOPHILIA;

EID: 84927125472     PISSN: None     EISSN: 1664302X     Source Type: Journal    
DOI: 10.3389/fmicb.2015.00298     Document Type: Article

References (31)

1. Amin, R. and V. Waters (2014). Antibiotic treatment for Stenotrophomonas maltophilia in people with cystic fibrosis. Cochrane Database Syst Rev 4, CD009249.
2. Bahar, O., R. Pruitt, D. D. Luu, B. Schwessinger, A. Daudi, F. Liu et al. (2014). The Xanthomonas Ax21 protein is processed by the general secretory system and is secreted in association with outer membrane vesicles. PeerJ 2, e242.
3. Bonnington, K. E. and M. J. Kuehn (2013). Protein selection and export via outer membrane vesicles. Biochim Biophys Acta 1843(8), 1612-1619.
4. Brooke, J. S. (2012). Stenotrophomonas maltophilia: an emerging global opportunistic pathogen. Clin Microbiol Rev 25(1), 2-41.
5. Ciofu, O., T. J. Beveridge, J. Kadurugamuwa, J. Walther-Rasmussen and N. Hoiby (2000). Chromosomal beta-lactamase is packaged into membrane vesicles and secreted from Pseudomonas aeruginosa. J Antimicrob Chemother 45(1), 9-13.
6. Crossman, L. C., V. C. Gould, J. M. Dow, G. S. Vernikos, A. Okazaki, M. Sebaihia et al. (2008). The complete genome, comparative and functional analysis of Stenotrophomonas maltophilia reveals an organism heavily shielded by drug resistance determinants. Genome Biol 9(4), doi: 10.1186/gb-2008-9-4-r74.
7. Deatherage, B. L., J. C. Lara, T. Bergsbaken, S. L. Rassoulian Barrett, S. Lara and B. T. Cookson (2009). Biogenesis of bacterial membrane vesicles. Mol Microbiol 72(6), 1395-1407.
8. Ferrer-Navarro, M., R. Planell, D. Yero, E. Mongiardini, G. Torrent, P. Huedo et al. (2013). Abundance of the Quorum-Sensing Factor Ax21 in Four Strains of Correlates with Mortality Rate in a New Zebrafish Model of Infection. PLoS One 8(6), doi:10.1371/journal.pone.0067207.
9. Fihman, V., A. Le Monnier, S. Corvec, F. Jaureguy, J. Tankovic, H. Jacquier et al. (2012). Stenotrophomonas maltophilia-the most worrisome threat among unusual nonfermentative gram-negative bacilli from hospitalized patients: a prospective multicenter study. J Infect 64(4), 391-398.
10. Finn, R.D., A. Bateman, J. Clements, P. Coggill, R.Y.Eberhardt, S.R. Eddy, S,.R. et al.(2014) The Pfam protein families database Nucleic Acids Res. Database Issue 42:D222-D230.
11. Fouhy, Y., K. Scanlon, K. Schouest, C. Spillane, L. Crossman, M. B. Avison et al. (2007). Diffusible signal factor-dependent cell-cell signaling and virulence in the nosocomial pathogen Stenotrophomonas maltophilia. J Bacteriol 189(13), 4964-4968.
12. Geromanos, S. J., J. P. Vissers, J. C. Silva, C. A. Dorschel, G. Z. Li, M. V. Gorenstein et al. (2009). The detection, correlation, and comparison of peptide precursor and product ions from data independent LC-MS with data dependant LC-MS/MS. Proteomics 9(6), 1683- 1695.
13. Haurat, M. F., W. Elhenawy and M. F. Feldman (2014). Prokaryotic membrane vesicles: new insights on biogenesis and biological roles. Biol Chem 396(2), 95-109.
14. Huang, T. P. and A. C. Lee Wong (2007). Extracellular fatty acids facilitate flagella-independent translocation by Stenotrophomonas maltophilia. Res Microbiol 158(8-9), 702-711.
15. Huedo, P., D. Yero, S. Martinez-Servat, I. Estibariz, R. Planell, P. Martinez et al. (2014). Two different rpf clusters distributed among a population of Stenotrophomonas maltophilia clinical strains display differential diffusible signal factor production and virulence regulation. J Bacteriol 196(13), 2431-2442.
16. Ionescu, M., P. A. Zaini, C. Baccari, S. Tran, A. M. da Silva and S. E. Lindow (2014). Xylella fastidiosa outer membrane vesicles modulate plant colonization by blocking attachment to surfaces. Proc Natl Acad Sci U S A 111(37), E3910-3918.
17. Koning, R. I., A. de Breij, G. T. Oostergetel, P. H. Nibbering, A. J. Koster and L. Dijkshoorn (2013) Cryo-electron tomography analysis of membrane vesicles from Acinetobacter baumannii ATCC19606 T. Res Microbiol 164(5), 397-405.
18. Li, G. Z., J. P. Vissers, J. C. Silva, D. Golick, M. V. Gorenstein and S. J. Geromanos (2009). Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures. Proteomics 9(6), 1696-1719.
19. MacLean, B., D. M. Tomazela, N. Shulman, M. Chambers, G. L. Finney, B. Frewen et al. (2010). Skyline: an open source document editor for creating and analyzing targeted proteomics experiments. Bioinformatics 26(7), 966-968.
20. McCarthy, Y., J. M. Dow and R. P. Ryan (2011). The Ax21 protein is a cell-cell signal that regulates virulence in the nosocomial pathogen Stenotrophomonas maltophilia. J Bacteriol 193(22), 6375-6378.
21. Mesuere, B., B. Devreese, G. Debyser, M. Aerts, P. Vandamme and P. Dawyndt (2012). Unipept: tryptic peptide-based biodiversity analysis of metaproteome samples. J Proteome Res 11(12), 5773-5780.
22. Park, H. J., S. W. Lee and S. W. Han (2014). Proteomic and functional analyses of a novel porinlike protein in Xanthomonas oryzae pv. oryzae. J Microbiol 52(12), 1030-1035.
23. Pradel N., J. Delmas, L. F. Wu, C. L. Santini and R. Bonnet (2009). Sec- and Tat-dependent translocation of beta-lactamases across the Escherichia coli inner membrane. Antimicrob Agents Chemother 53(1), 242-248
24. Qian, G., Y. Zhou, Y. Zhao, Z. Song, S. Wang, J. Fan et al. (2013). Proteomic analysis reveals novel extracellular virulence-associated proteins and functions regulated by the diffusible signal factor (DSF) in Xanthomonas oryzae pv. oryzicola. J Proteome Res 12(7), 3327- 3341.
25. Ryan, R. P. and J. M. Dow (2010). Communication with a growing family: diffusible signal factor (DSF) signaling in bacteria. Trends Microbiol 19(3), 145-152.
26. Selkrig, J., D. L. Leyton, C. T. Webb and T. Lithgow (2013). Assembly of beta-barrel proteins into bacterial outer membranes. Biochim Biophys Acta 1843(8), 1542-1550.
27. Tao, F., Y. W. He, D. H. Wu, S. Swarup and L. H. Zhang (2010). The cyclic nucleotide monophosphate domain of Xanthomonas campestris global regulator Clp defines a new class of cyclic di-GMP effectors. J Bacteriol 192(4), 1020-1029.
28. Tiwari, V. (2014). Outer membrane vesicle proteomics to discover the pathogenicity of Acinetobacter baumannii. J Data Mining Genomics Proteomics 5:e116.
29. Twomey, K. B., O. J. O'Connell, Y. McCarthy, J. M. Dow, G. A. O'Toole, B. J. Plant et al. (2012). Bacterial cis-2-unsaturated fatty acids found in the cystic fibrosis airway modulate virulence and persistence of Pseudomonas aeruginosa. ISME J 6(5), 939-950.
30. Van der Pol, E., A.G. Hoekstra, A. Sturk, C. Otto, T.G. van Leeuwenen R. Nieuwland (2010) Optical and non-optical methods for detection and characterization of microparticles and exosomes. J Thromb Haemost. 8(12):2596-2607.
31. Van Oudenhove, L., K. De Vriendt, J. Van Beeumen, P. S. Mercuri and B. Devreese (2012). Differential proteomic analysis of the response of Stenotrophomonas maltophilia to imipenem. Appl Microbiol Biotechnol. 95(3), 717-733.