메뉴 건너뛰기




Volumn 6, Issue 4, 2015, Pages 389-398

CATS regression - a model-based approach to studying trait-based community assembly

Author keywords

Community composition; Community level models; Fourth corner model; Generalized linear models; Maximum entropy; Poisson regression

Indexed keywords


EID: 84926655641     PISSN: None     EISSN: 2041210X     Source Type: Journal    
DOI: 10.1111/2041-210X.12280     Document Type: Article
Times cited : (78)

References (48)
  • 2
    • 0002154022 scopus 로고    scopus 로고
    • A new method for non-parametric multivariate analysis of variance
    • Anderson, M.J. (2001) A new method for non-parametric multivariate analysis of variance. Austral Ecology, 26, 32-46.
    • (2001) Austral Ecology , vol.26 , pp. 32-46
    • Anderson, M.J.1
  • 4
    • 0025250844 scopus 로고
    • Measurement of the realized qualitative niche: environmental niches of five Eucalyptus species
    • Austin, M., Nicholls, A. & Margules, C.R. (1990) Measurement of the realized qualitative niche: environmental niches of five Eucalyptus species. Ecological Monographs, 60, 161-177.
    • (1990) Ecological Monographs , vol.60 , pp. 161-177
    • Austin, M.1    Nicholls, A.2    Margules, C.R.3
  • 6
    • 84895773281 scopus 로고    scopus 로고
    • The fourth-corner solution - using predictive models to understand how species traits interact with the environment
    • Brown, A.M., Warton, D.I., Andrew, N.R., Binns, M., Cassis, G. & Gibb, H. (2014) The fourth-corner solution - using predictive models to understand how species traits interact with the environment. Methods in Ecology and Evolution, 5, 344-352.
    • (2014) Methods in Ecology and Evolution , vol.5 , pp. 344-352
    • Brown, A.M.1    Warton, D.I.2    Andrew, N.R.3    Binns, M.4    Cassis, G.5    Gibb, H.6
  • 7
    • 0001608056 scopus 로고    scopus 로고
    • An R-squared measure of goodness of fit for some common nonlinear regression models
    • Cameron, C. & Windmeijer, F. (1997) An R-squared measure of goodness of fit for some common nonlinear regression models. Journal of Econometrics, 77, 329-342.
    • (1997) Journal of Econometrics , vol.77 , pp. 329-342
    • Cameron, C.1    Windmeijer, F.2
  • 12
    • 73949141293 scopus 로고    scopus 로고
    • Species distribution models: ecological explanation and prediction across space and time
    • Elith, J. & Leathwick, J. (2009) Species distribution models: ecological explanation and prediction across space and time. Annual Review of Ecology, Evolution, and Systematics, 40, 677-697.
    • (2009) Annual Review of Ecology, Evolution, and Systematics , vol.40 , pp. 677-697
    • Elith, J.1    Leathwick, J.2
  • 13
    • 33646556408 scopus 로고    scopus 로고
    • Spatial modelling of biodiversity at the community level
    • Ferrier, S. & Guisan, A. (2006) Spatial modelling of biodiversity at the community level. Chinese Journal of Applied Ecology, 43, 393-404.
    • (2006) Chinese Journal of Applied Ecology , vol.43 , pp. 393-404
    • Ferrier, S.1    Guisan, A.2
  • 14
    • 84890888563 scopus 로고    scopus 로고
    • Finite-sample equivalence in statistical models for presence-only data
    • Fithian, W. & Hastie, T. (2013) Finite-sample equivalence in statistical models for presence-only data. Annals of Applied Statistics, 7, 1837-2457.
    • (2013) Annals of Applied Statistics , vol.7 , pp. 1837-2457
    • Fithian, W.1    Hastie, T.2
  • 15
    • 77950537175 scopus 로고    scopus 로고
    • Regularization paths for generalized linear models via coordinate descent
    • Friedman, J., Hastie, T. & Tibshirani, R. (2010). Regularization paths for generalized linear models via coordinate descent. Journal of Statistical Software, 33, 1-22.
    • (2010) Journal of Statistical Software , vol.33 , pp. 1-22
    • Friedman, J.1    Hastie, T.2    Tibshirani, R.3
  • 17
    • 0001373576 scopus 로고
    • Maximum entropy for hypothesis formulation, especially for multidimensional contingency tables
    • Good, I.J. (1963) Maximum entropy for hypothesis formulation, especially for multidimensional contingency tables. The Annals of Mathematical Statistics, 34, 911-934.
    • (1963) The Annals of Mathematical Statistics , vol.34 , pp. 911-934
    • Good, I.J.1
  • 19
    • 77952526154 scopus 로고    scopus 로고
    • Maximum entropy, logistic regression, and species abundance
    • He, F. (2010) Maximum entropy, logistic regression, and species abundance. Oikos, 119, 578-582.
    • (2010) Oikos , vol.119 , pp. 578-582
    • He, F.1
  • 20
    • 84885128818 scopus 로고    scopus 로고
    • Selecting traits that explain species-environment relationships: a generalized linear mixed model approach
    • Jamil, T., Ozinga, W.A., Kleyer, M. & ter Braak, C.J.F. (2013) Selecting traits that explain species-environment relationships: a generalized linear mixed model approach. Journal of Vegetation Science, 24, 988-1000.
    • (2013) Journal of Vegetation Science , vol.24 , pp. 988-1000
    • Jamil, T.1    Ozinga, W.A.2    Kleyer, M.3    ter Braak, C.J.F.4
  • 21
    • 84986779657 scopus 로고
    • Assembly and response rules: two goals for predictive community ecology
    • Keddy, P.A. (1992) Assembly and response rules: two goals for predictive community ecology. Journal of Vegetation Science, 3, 157-164.
    • (1992) Journal of Vegetation Science , vol.3 , pp. 157-164
    • Keddy, P.A.1
  • 23
    • 84926624059 scopus 로고    scopus 로고
    • FD: measuring functional diversity from multiple traits, and other tools for functional ecology. R package version 1.0-11.
    • Laliberté, E. & Shipley, B. (2011) FD: measuring functional diversity from multiple traits, and other tools for functional ecology. R package version 1.0-11.
    • (2011)
    • Laliberté, E.1    Shipley, B.2
  • 24
    • 0030616874 scopus 로고    scopus 로고
    • Relating behavior to habitat: solutions to the fourth-corner problem
    • Legendre, P., Galzin, R. & Harmelin-Vivien, M.L. (1997) Relating behavior to habitat: solutions to the fourth-corner problem. Ecology, 78, 547-562.
    • (1997) Ecology , vol.78 , pp. 547-562
    • Legendre, P.1    Galzin, R.2    Harmelin-Vivien, M.L.3
  • 26
    • 46349105790 scopus 로고    scopus 로고
    • Exploring predictions of abundance from body mass using hierarchical comparative approaches
    • McGill, B.J. (2008) Exploring predictions of abundance from body mass using hierarchical comparative approaches. The American Naturalist, 172, 88-101.
    • (2008) The American Naturalist , vol.172 , pp. 88-101
    • McGill, B.J.1
  • 28
    • 84873554456 scopus 로고    scopus 로고
    • A general and simple method for obtaining R2 from generalized linear mixed-effects models
    • Nakagawa, S. & Schielzeth, H. (2013) A general and simple method for obtaining R2 from generalized linear mixed-effects models. Methods in Ecology and Evolution, 4, 133-142.
    • (2013) Methods in Ecology and Evolution , vol.4 , pp. 133-142
    • Nakagawa, S.1    Schielzeth, H.2
  • 30
    • 27944446350 scopus 로고    scopus 로고
    • Maximum entropy modeling of species geographic distributions
    • Phillips, S.J., Anderson, R.P. & Schapire, R.E. (2006) Maximum entropy modeling of species geographic distributions. Ecological Modelling, 190, 231-259.
    • (2006) Ecological Modelling , vol.190 , pp. 231-259
    • Phillips, S.J.1    Anderson, R.P.2    Schapire, R.E.3
  • 31
    • 84863227837 scopus 로고    scopus 로고
    • The role of functional traits in species distributions revealed through a hierarchical model
    • Pollock, L.J., Morris, W.K. & Vesk, P.A. (2012) The role of functional traits in species distributions revealed through a hierarchical model. Ecography, 35, 716-725.
    • (2012) Ecography , vol.35 , pp. 716-725
    • Pollock, L.J.1    Morris, W.K.2    Vesk, P.A.3
  • 32
  • 33
    • 84875940984 scopus 로고    scopus 로고
    • Equivalence of MAXENT and Poisson point process models for species distribution modeling in ecology
    • Renner, I.W. & Warton, D.I. (2013) Equivalence of MAXENT and Poisson point process models for species distribution modeling in ecology. Biometrics, 69, 274-281.
    • (2013) Biometrics , vol.69 , pp. 274-281
    • Renner, I.W.1    Warton, D.I.2
  • 34
    • 34250646110 scopus 로고    scopus 로고
    • Comment on 'From plant traits to plant communities: a statistical mechanistic approach to biodiversity
    • Roxburgh, S.H. & Mokany, K. (2007) Comment on 'From plant traits to plant communities: a statistical mechanistic approach to biodiversity'. Science, 316, 1425.
    • (2007) Science , vol.316 , pp. 1425
    • Roxburgh, S.H.1    Mokany, K.2
  • 37
    • 33750723839 scopus 로고    scopus 로고
    • From plant traits to plant communities: a statistical mechanistic approach to biodiversity
    • Shipley, B., Vile, D. & Garnier, E. (2006) From plant traits to plant communities: a statistical mechanistic approach to biodiversity. Science, 314, 812-814.
    • (2006) Science , vol.314 , pp. 812-814
    • Shipley, B.1    Vile, D.2    Garnier, E.3
  • 38
    • 85020571025 scopus 로고    scopus 로고
    • Response to Comments on 'From plant traits to plant communities: a statistical mechanistic approach to biodiversity
    • Shipley, B., Vile, D. & Garnier, E. (2007) Response to Comments on 'From plant traits to plant communities: a statistical mechanistic approach to biodiversity'. Science, 316, 1425.
    • (2007) Science , vol.316 , pp. 1425
    • Shipley, B.1    Vile, D.2    Garnier, E.3
  • 39
    • 84861352842 scopus 로고    scopus 로고
    • Quantifying the importance of local niche-based and stochastic processes to tropical tree community assembly
    • Shipley, B., Paine, C.T. & Baraloto, C. (2012) Quantifying the importance of local niche-based and stochastic processes to tropical tree community assembly. Ecology, 93, 760-769.
    • (2012) Ecology , vol.93 , pp. 760-769
    • Shipley, B.1    Paine, C.T.2    Baraloto, C.3
  • 40
    • 84862765777 scopus 로고    scopus 로고
    • Quantifying trait selection driving community assembly: a test in herbaceous plant communities under contrasted land use regimes
    • Sonnier, G., Navas, M.-L., Fayolle, A. & Shipley, B. (2012) Quantifying trait selection driving community assembly: a test in herbaceous plant communities under contrasted land use regimes. Oikos, 121, 1103-1111.
    • (2012) Oikos , vol.121 , pp. 1103-1111
    • Sonnier, G.1    Navas, M.-L.2    Fayolle, A.3    Shipley, B.4
  • 41
    • 42149122753 scopus 로고    scopus 로고
    • Predicting the abundance of European stream macroinvertebrates using biological attributes
    • Statzner, B., Bonada, N. & Dolédec, S. (2008) Predicting the abundance of European stream macroinvertebrates using biological attributes. Oecologia, 156, 65-73.
    • (2008) Oecologia , vol.156 , pp. 65-73
    • Statzner, B.1    Bonada, N.2    Dolédec, S.3
  • 42
    • 36949080948 scopus 로고
    • Aggregation, variance and mean
    • Taylor, L.R. (1961) Aggregation, variance and mean. Nature, 189, 732-735.
    • (1961) Nature , vol.189 , pp. 732-735
    • Taylor, L.R.1
  • 43
    • 77954005831 scopus 로고    scopus 로고
    • Explaining abundance occupancy relationships in specialists and generalists: a case study on aquatic macroinvertebrates in standing waters
    • Verberk, W.C.E.P., Van Der Velde, G. & Esselink, H. (2010) Explaining abundance occupancy relationships in specialists and generalists: a case study on aquatic macroinvertebrates in standing waters. Journal of Animal Ecology, 79, 589-601.
    • (2010) Journal of Animal Ecology , vol.79 , pp. 589-601
    • Verberk, W.C.E.P.1    Van Der Velde, G.2    Esselink, H.3
  • 44
    • 84867392377 scopus 로고    scopus 로고
    • mvabund - an R package for model-based analysis of multivariate abundance data
    • Wang, Y., Naumann, U., Wright, S.T. & Warton, D.I. (2012) mvabund - an R package for model-based analysis of multivariate abundance data. Methods in Ecology and Evolution, 3, 471-474.
    • (2012) Methods in Ecology and Evolution , vol.3 , pp. 471-474
    • Wang, Y.1    Naumann, U.2    Wright, S.T.3    Warton, D.I.4
  • 45
    • 84867389652 scopus 로고    scopus 로고
    • Distance-based multivariate analyses confound location and dispersion effects
    • Warton, D.I., Wright, S.T. & Wang, Y. (2012) Distance-based multivariate analyses confound location and dispersion effects. Methods in Ecology and Evolution, 3, 89-101.
    • (2012) Methods in Ecology and Evolution , vol.3 , pp. 89-101
    • Warton, D.I.1    Wright, S.T.2    Wang, Y.3
  • 46
    • 84871770547 scopus 로고    scopus 로고
    • The role of biotic interactions in shaping distributions and realised assemblages of species: implications for species distribution modelling
    • Wisz, M.S., Pottier, J., Kissling, W.D., Pellissier, L., Lenoir, J., Damgaard, C.F. et al. (2013) The role of biotic interactions in shaping distributions and realised assemblages of species: implications for species distribution modelling. Biological Reviews, 88, 15-30.
    • (2013) Biological Reviews , vol.88 , pp. 15-30
    • Wisz, M.S.1    Pottier, J.2    Kissling, W.D.3    Pellissier, L.4    Lenoir, J.5    Damgaard, C.F.6
  • 47
    • 84875739131 scopus 로고    scopus 로고
    • Plant trait-species abundance relationships vary with environmental properties in subtropical forests in eastern China
    • Yan, E.-R., Yang, X.-D., Chang, S.X. & Wang, X.-H. (2013) Plant trait-species abundance relationships vary with environmental properties in subtropical forests in eastern China. PLoS One, 8, e61113.
    • (2013) PLoS One , vol.8 , pp. e61113
    • Yan, E.-R.1    Yang, X.-D.2    Chang, S.X.3    Wang, X.-H.4
  • 48
    • 77949335209 scopus 로고    scopus 로고
    • The VGAM package for categorical data analysis
    • Yee, T.W. (2010) The VGAM package for categorical data analysis. Journal of Statistical Software, 32, 1-34.
    • (2010) Journal of Statistical Software , vol.32 , pp. 1-34
    • Yee, T.W.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.