HapTree-X: An integrative Bayesian framework for haplotype reconstruction from transcriptome and genome sequencing data

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 9029, Issue , 2015, Pages 28-29

  Berger, Emily ^a,b,c   Yorukoglu, Deniz ^b   Berger, Bonnie ^a,b  

^a MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^b MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84926327156     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-319-16706-0_4     Document Type: Conference Paper

References (3)

1. Bansal, V., Bafna, V.: Hapcut: an efficient and accurate algorithm for the haplotype assembly problem. Bioinformatics 24(16), i153–i159 (2008)
2. Berger, E., Yorukoglu, D., Peng, J., Berger, B.: Haptree: A novel Bayesian framework for single individual polyplotyping using NGS data. PLoS Computational Biology 10(3), e1003502 (2014)
3. Serre, D., Gurd, S., Ge, B., Sladek, R., Sinnett, D., Harmsen, E., Bibikova, M., Chudin, E., Barker, D.L., Dickinson, T., et al.: Differential allelic expression in the human genome: a robust approach to identify genetic and epigenetic cis-acting mechanisms regulating gene expression. PLoS Genetics 4(2), e1000006 (2008)