Exportin-5 mediates nuclear export of SRP RNA in vertebrates

Genes to Cells

Volumn 20, Issue 4, 2015, Pages 281-291

  Takeiwa, Toshihiko ^a   Taniguchi, Ichiro ^a   Ohno, Mutsuhito ^a  

^a KYOTO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CELL EXTRACT; EXPORTIN 1; EXPORTIN 5; MICRORNA; MICRORNA PRECURSOR; PROTEIN ANTIBODY; RAN PROTEIN; RECOMBINANT PROTEIN; RNA; RNA PRECURSOR; SIGNAL RECOGNITION PARTICLE; TRANSFER RNA; UNCLASSIFIED DRUG; CELL RECEPTOR; EXPORTIN 1 PROTEIN; KARYOPHERIN;

ABSENCE; ANIMAL CELL; ARTICLE; BIOTINYLATION; CELL NUCLEUS; CONTROLLED STUDY; FEMALE; HELA CELL LINE; HUMAN; HUMAN CELL; IN VITRO STUDY; MONOGENIC DISORDER; NONHUMAN; OOCYTE; PRIORITY JOURNAL; PROTEIN FUNCTION; RNA TRANSPORT; VERTEBRATE; XENOPUS; ACTIVE TRANSPORT; ANIMAL; METABOLISM; MICROINJECTION; PROCEDURES;

SACCHAROMYCETALES; VERTEBRATA;

ACTIVE TRANSPORT, CELL NUCLEUS; ANIMALS; CELL NUCLEUS; HELA CELLS; HUMANS; KARYOPHERINS; MICROINJECTIONS; MICRORNAS; OOCYTES; RECEPTORS, CYTOPLASMIC AND NUCLEAR; RNA; RNA, TRANSFER; SIGNAL RECOGNITION PARTICLE; VERTEBRATES; XENOPUS;

EID: 84926161497     PISSN: 13569597     EISSN: 13652443     Source Type: Journal    
DOI: 10.1111/gtc.12218     Document Type: Article

References (43)

1. Alavian, C.N., Politz, J.C., Lewandowski, L.B., Powers, C.M. & Pederson, T. (2004) Nuclear export of signal recognition particle RNA in mammalian cells. Biochem. Biophys. Res. Commun. 313, 351-355.
2. Andersen, E.S., Rosenblad, M.A., Larsen, N., Westergaard, J.C., Burks, J., Wower, I.K., Wower, J., Gorodkin, J., Samuelsson, T. & Zwieb, C. (2006) The tmRDB and SRPDB resources. Nucleic Acids Res. 34(Database issue), D163-D168.
3. Arts, G.J., Fornerod, M. & Mattaj, I.W. (1998) Identification of a nuclear export receptor for tRNA. Curr. Biol. 8, 305-314.
4. Bohnsack, M.T., Czaplinski, K. & Görlich, D. (2004) Exportin 5 is a RanGTP-dependent dsRNA-binding protein that mediates nuclear export of pre-miRNAs. RNA 10, 185-191.
5. Bohnsack, M.T., Regener, K., Schwappach, B., Saffrich, R., Paraskeva, E., Hartmann, E. & Görlich, D. (2002) Exp5 exports eEF1A via tRNA from nuclei and synergizes with other transport pathways to confine translation to the cytoplasm. EMBO J. 21, 6205-6215.
6. Brown, J.D., Hann, B.C., Medzihradszky, K.F., Niwa, M., Burlingame, A.L. & Walter, P. (1994) Subunits of the Saccharomyces cerevisiae signal recognition particle required for its functional expression. EMBO J. 13, 4390-4400.
7. Calado, A., Treichel, N., Müller, E.C., Otto, A. & Kutay, U. (2002) Exportin-5-mediated nuclear export of eukaryotic elongation factor 1A and tRNA. EMBO J. 21, 6216-6224.
8. Cheng, H., Dufu, K., Lee, C.S., Hsu, J.L., Dias, A. & Reed, R. (2006) Human mRNA export machinery recruited to the 5′ end of mRNA. Cell 127, 1389-1400.
9. Ciufo, L.F. & Brown, J.D. (2000) Nuclear export of yeast signal recognition particle lacking Srp54p by the Xpo1p/Crm1p NES-dependent pathway. Curr. Biol. 10, 1256-1264.
10. Cullen, B.R. (2003) Nuclear RNA export. J. Cell Sci. 116, 587-597.
11. Egea, P.F., Stroud, R.M. & Walter, P. (2005) Targeting proteins to membranes: structure of the signal recognition particle. Curr. Opin. Struct. Biol. 15, 213-220.
12. Fischer, U., Huber, J., Boelens, W.C., Mattaj, I.W. & Lührmann, R. (1995) The HIV-1 Rev activation domain is a nuclear export signal that accesses an export pathway used by specific cellular RNAs. Cell 82, 475-483.
13. Fornerod, M., Ohno, M., Yoshida, M. & Mattaj, I.W. (1997) CRM1 is an export receptor for leucine-rich nuclear export signals. Cell 90, 1051-1060.
14. Gadal, O., Strauß, D., Kessl, J., Trumpower, B., Tollervey, D. & Hurt, E. (2001) Nuclear export of 60s ribosomal subunits depends on Xpo1p and requires a nuclear export sequence-containing factor, Nmd3p, that associates with the large subunit protein Rpl10p. Mol. Cell. Biol. 21, 3405-3415.
15. Grosshans, H., Deinert, K., Hurt, E. & Simos, G. (2001) Biogenesis of the signal recognition particle (SRP) involves import of SRP proteins into the nucleolus, assembly with the SRP-RNA, and Xpo1p-mediated export. J. Cell Biol. 153, 745-762.
16. Gwizdek, C., Bertrand, E., Dargemont, C., Lefebvre, J.C., Blanchard, J.M., Singer, R.H. & Doglio, A. (2001) Terminal minihelix, a novel RNA motif that directs polymerase III transcripts to the cell cytoplasm. Terminal minihelix and RNA export. J. Biol. Chem. 276, 25910-25918.
17. Gwizdek, C., Ossareh-Nazari, B., Brownawell, A.M., Doglio, A., Bertrand, E., Macara, I.G. & Dargemont, C. (2003) Exportin-5 mediates nuclear export of minihelix-containing RNAs. J. Biol. Chem. 278, 5505-5508.
18. Halic, M., Becker, T., Pool, M.R., Spahn, C.M., Grassucci, R.A., Frank, J. & Beckmann, R. (2004) Structure of the signal recognition particle interacting with the elongation-arrested ribosome. Nature 427, 808-814.
19. Hann, B.C. & Walter, P. (1991) The signal recognition particle in S. cerevisiae. Cell 67, 131-144.
20. He, X.P., Bataillé, N. & Fried, H.M. (1994) Nuclear export of signal recognition particle RNA is a facilitated process that involves the Alu sequence domain. J. Cell Sci. 107, 903-912.
21. Jarmolowski, A., Boelens, W.C., Izaurralde, E. & Mattaj, I.W. (1994) Nuclear export of different classes of RNA is mediated by specific factors. J. Cell Biol. 124, 627-635.
22. Katahira, J. (2012) mRNA export and the TREX complex. Biochim. Biophys. Acta 1819, 507-513.
23. Komeili, A. & O'Shea, E.K. (2001) New perspectives on nuclear transport. Annu. Rev. Genet. 35, 341-364.
24. Kutay, U., Lipowsky, G., Izaurralde, E., Bischoff, F.R., Schwarzmaier, P., Hartmann, E. & Görlich, D. (1998) Identification of a tRNA-specific nuclear export receptor. Mol. Cell 1, 359-369.
25. Lund, E., Güttinger, S., Calado, A., Dahlberg, J.E. & Kutay, U. (2004) Nuclear export of microRNA precursors. Science 303, 95-98.
26. Mason, N., Ciufo, L.F. & Brown, J.D. (2000) Elongation arrest is a physiologically important function of signal recognition particle. EMBO J. 19, 4164-4174.
27. Masuyama, K., Taniguchi, I., Kataoka, N. & Ohno, M. (2004) RNA length defines RNA export pathway. Genes Dev. 18, 2074-2085.
28. Moy, T.I. & Silver, P.A. (1999) Nuclear export of the small ribosomal subunit requires the ran-GTPase cycle and certain nucleoporins. Genes Dev. 13, 2118-2133.
29. Nojima, T., Hirose, T., Kimura, H. & Hagiwara, M. (2007) The interaction between cap-binding complex and RNA export factor is required for intronless mRNA export. J. Biol. Chem. 282, 15645-15651.
30. Ohno, M., Segref, A., Bachi, A., Wilm, M. & Mattaj, I.W. (2000) PHAX, a mediator of U snRNA nuclear export whose activity is regulated by phosphorylation. Cell 101, 187-198.
31. Okada, C., Yamashita, E., Lee, S.J., Shibata, S., Katahira, J., Nakagawa, A., Yoneda, Y. & Tsukihara, T. (2009) A high-resolution structure of the pre-microRNA nuclear export machinery. Science 326, 1275-1279.
32. Politz, J.C., Lewandowski, L.B. & Pederson, T. (2002) Signal recognition particle RNA localization within the nucleolus differs from the classical sites of ribosome synthesis. J. Cell Biol. 159, 411-418.
33. Politz, J.C., Yarovoi, S., Kilroy, S.M., Gowda, K., Zwieb, C. & Pederson, T. (2000) Signal recognition particle components in the nucleolus. Proc. Natl Acad. Sci. USA 97, 55-60.
34. Rosenblad, M.A., Larsen, N., Samuelsson, T. & Zwieb, C. (2009) Kinship in the SRP RNA family. RNA Biol. 6, 508-516.
35. Rosenblad, M.A., Zwieb, C. & Samuelsson, T. (2004) Identification and comparative analysis of components from the signal recognition particle in protozoa and fungi. BMC Genomics. 5, 5.
36. Shibata, S., Sasaki, M., Miki, T., Shimamoto, A., Furuichi, Y., Katahira, J. & Yoneda, Y. (2006) Exportin-5 orthologues are functionally divergent among species. Nucleic Acids Res. 34, 4711-4721.
37. Sommerville, J., Brumwell, C.L., Politz, J.C. & Pederson, T. (2005) Signal recognition particle assembly in relation to the function of amplified nucleoli of Xenopus oocytes. J. Cell Sci. 118, 1299-1307.
38. Stirling, C.J. & Hewitt, E.W. (1992) The S. cerevisiae SEC65 gene encodes a component of yeast signal recognition particle with homology to human SRP19. Nature 356, 534-537.
39. Strub, K., Fornallaz, M. & Bui, N. (1999) The Alu domain homolog of the yeast signal recognition particle consists of an Srp14p homodimer and a yeast-specific RNA structure. RNA 5, 1333-1347.
40. Wild, T., Horvath, P., Wyler, E., Widmann, B., Badertscher, L., Zemp, I., Kozak, K., Csucs, G., Lund, E. & Kutay, U. (2010) A protein inventory of human ribosome biogenesis reveals an essential function of exportin 5 in 60S subunit export. PLoS Biol. 8, e1000522.
41. Yao, W., Roser, D., Köhler, A., Bradatsch, B., Bassler, J. & Hurt, E. (2007) Nuclear export of ribosomal 60S subunits by the general mRNA export receptor Mex67-Mtr2. Mol. Cell 26, 51-62.
42. Yi, R., Qin, Y., Macara, I.G. & Cullen, B.R. (2003) Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs. Genes Dev. 17, 3011-3016.
43. Zwieb, C., van Nues, R.W., Rosenblad, M.A., Brown, J.D. & Samuelsson, T. (2005) A nomenclature for all signal recognition particle RNAs. RNA 11, 7-13.