-
1
-
-
84862022192
-
Phenotypic plasticity: molecular mechanisms and adaptive significance
-
Kelly SA, Panhuis TM, Stoehr AM: Phenotypic plasticity: molecular mechanisms and adaptive significance. Compr Physiol 2012, 2:1417-1439.
-
(2012)
Compr Physiol
, vol.2
, pp. 1417-1439
-
-
Kelly, S.A.1
Panhuis, T.M.2
Stoehr, A.M.3
-
2
-
-
84880748319
-
Phenotypic plasticity and evolutionary demographic responses to climate change: taking theory out to the field
-
Chevin L, Collins S, Lefèvre F: Phenotypic plasticity and evolutionary demographic responses to climate change: taking theory out to the field. Funct Ecol 2013, 27:966-979.
-
(2013)
Funct Ecol
, vol.27
, pp. 966-979
-
-
Chevin, L.1
Collins, S.2
Lefèvre, F.3
-
3
-
-
0038161217
-
The role of phenotypic plasticity in driving genetic evolution
-
Price TD, Qvarnström A, Irwin DE: The role of phenotypic plasticity in driving genetic evolution. Proc R Soc London 2003, 270:1433-1440. 10.1098/rspb.2003.2372
-
(2003)
Proc R Soc London
, vol.270
, pp. 1433-1440
-
-
Price, T.D.1
Qvarnström, A.2
Irwin, D.E.3
-
4
-
-
6344263585
-
Adaptive phenotypic plasticity and the successful colonization of a novel environment
-
Yeh PJ, Price TD: Adaptive phenotypic plasticity and the successful colonization of a novel environment. Am Nat 2004, 164:531-542. 10.1086/423825
-
(2004)
Am Nat
, vol.164
, pp. 531-542
-
-
Yeh, P.J.1
Price, T.D.2
-
5
-
-
78649632298
-
Plant phenotypic plasticity in a changing climate
-
Nicotra AB, Atkin OK, Bonser SP, Davidson AM, Finnegan EJ, Mathesius U, Poot P, Purugganan MD, Richards CL, Valladares F, Van KM: Plant phenotypic plasticity in a changing climate. Trends Plant Sci 2010, 15:684-692. 10.1016/j.tplants.2010.09.008
-
(2010)
Trends Plant Sci
, vol.15
, pp. 684-692
-
-
Nicotra, A.B.1
Atkin, O.K.2
Bonser, S.P.3
Davidson, A.M.4
Finnegan, E.J.5
Mathesius, U.6
Poot, P.7
Purugganan, M.D.8
Richards, C.L.9
Valladares, F.10
Van, K.M.11
-
6
-
-
84872855352
-
Genomic basis for coral resilience to climate change
-
Barshis DJ, Ladner JT, Oliver TA, Seneca FO, Traylor-Knowles N, Palumbi SR: Genomic basis for coral resilience to climate change. Proc Natl Acad Sci U S A 2013, 110:1387-1392. 10.1073/pnas.1210224110
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 1387-1392
-
-
Barshis, D.J.1
Ladner, J.T.2
Oliver, T.A.3
Seneca, F.O.4
Traylor-Knowles, N.5
Palumbi, S.R.6
-
7
-
-
84901216800
-
Mechanisms of Reef Coral Resistance to Future Climate Change. Science
-
Palumbi SR, Barshis DJ, Traylor-Knowles N, Bay RA: Mechanisms of Reef Coral Resistance to Future Climate Change. Science (80-) 2014., 895:
-
(2014)
, Issue.80
, pp. 895
-
-
Palumbi, S.R.1
Barshis, D.J.2
Traylor-Knowles, N.3
Bay, R.A.4
-
8
-
-
70349158627
-
Genomic reaction norms: using integrative biology to understand molecular mechanisms of phenotypic plasticity
-
Aubin-Horth N, Renn S: Genomic reaction norms: using integrative biology to understand molecular mechanisms of phenotypic plasticity. Mol Ecol 2009, 18:3763-3780. 10.1111/j.1365-294X.2009.04313.x
-
(2009)
Mol Ecol
, vol.18
, pp. 3763-3780
-
-
Aubin-Horth, N.1
Renn, S.2
-
9
-
-
77949824393
-
Environmentally induced phenotypes and DNA methylation: how to deal with unpredictable conditions until the next generation and after
-
Angers B, Castonguay E, Massicotte R: Environmentally induced phenotypes and DNA methylation: how to deal with unpredictable conditions until the next generation and after. Mol Ecol 2010, 19:1283-1295. 10.1111/j.1365-294X.2010.04580.x
-
(2010)
Mol Ecol
, vol.19
, pp. 1283-1295
-
-
Angers, B.1
Castonguay, E.2
Massicotte, R.3
-
10
-
-
77952615670
-
Experimental alteration of DNA methylation affects the phenotypic plasticity of ecologically relevant traits in Arabidopsis thaliana
-
Bossdorf O, Arcuri D, Richards CL, Pigliucci M: Experimental alteration of DNA methylation affects the phenotypic plasticity of ecologically relevant traits in Arabidopsis thaliana. Evol Ecol 2010, 24:541-553. 10.1007/s10682-010-9372-7
-
(2010)
Evol Ecol
, vol.24
, pp. 541-553
-
-
Bossdorf, O.1
Arcuri, D.2
Richards, C.L.3
Pigliucci, M.4
-
11
-
-
84866297026
-
Is there a relationship between DNA methylation and phenotypic plasticity in invertebrates?
-
Roberts SB, Gavery MR: Is there a relationship between DNA methylation and phenotypic plasticity in invertebrates? Front Physiol 2012, 2:1-5.
-
(2012)
Front Physiol
, vol.2
, pp. 1-5
-
-
Roberts, S.B.1
Gavery, M.R.2
-
12
-
-
44349160230
-
Population epigenetics
-
Richards EJ: Population epigenetics. Curr Opin Genet Dev 2008, 18:221-226. 10.1016/j.gde.2008.01.014
-
(2008)
Curr Opin Genet Dev
, vol.18
, pp. 221-226
-
-
Richards, E.J.1
-
13
-
-
0034968819
-
Methylated cytosine and the brain: a new base for neuroscience
-
Tucker KL: Methylated cytosine and the brain: a new base for neuroscience. Neuron 2001, 30:649-652. 10.1016/S0896-6273(01)00325-7
-
(2001)
Neuron
, vol.30
, pp. 649-652
-
-
Tucker, K.L.1
-
14
-
-
0037372003
-
Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals
-
Jaenisch R, Bird A: Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals. Nat Genet Suppl 2003, 33:245-254. 10.1038/ng1089
-
(2003)
Nat Genet Suppl
, vol.33
, pp. 245-254
-
-
Jaenisch, R.1
Bird, A.2
-
15
-
-
84863986133
-
Functions of DNA methylation: islands, start sites, gene bodies and beyond
-
Jones PA: Functions of DNA methylation: islands, start sites, gene bodies and beyond. Nat Rev Genet 2012, 13:484-492. 10.1038/nrg3230
-
(2012)
Nat Rev Genet
, vol.13
, pp. 484-492
-
-
Jones, P.A.1
-
16
-
-
70549104872
-
Dynamic DNA methylation programs persistent adverse effects of early-life stress
-
Murgatroyd C, Patchev AV, Wu Y, Micale V, Bockmühl Y, Fischer D, Holsboer F, Wotjak CT, Almeida OFX, Spengler D: Dynamic DNA methylation programs persistent adverse effects of early-life stress. Nat Neurosci 2009, 12:1559-1566. 10.1038/nn.2436
-
(2009)
Nat Neurosci
, vol.12
, pp. 1559-1566
-
-
Murgatroyd, C.1
Patchev, A.V.2
Wu, Y.3
Micale, V.4
Bockmühl, Y.5
Fischer, D.6
Holsboer, F.7
Wotjak, C.T.8
Almeida, O.F.X.9
Spengler, D.10
-
17
-
-
84856181467
-
Current research trends in early life stress and depression: review of human studies on sensitive periods, gene-environment interactions, and epigenetics
-
Heim C, Binder EB: Current research trends in early life stress and depression: review of human studies on sensitive periods, gene-environment interactions, and epigenetics. Exp Neurol 2012, 233:102-111. 10.1016/j.expneurol.2011.10.032
-
(2012)
Exp Neurol
, vol.233
, pp. 102-111
-
-
Heim, C.1
Binder, E.B.2
-
18
-
-
79952846249
-
Drought-induced site-specific DNA methylation and its association with drought tolerance in rice (Oryza sativa L.)
-
Wang W-S, Pan Y-J, Zhao X-Q, Dwivedi D, Zhu L-H, Ali J, Fu B-Y, Li Z-K: Drought-induced site-specific DNA methylation and its association with drought tolerance in rice (Oryza sativa L.). J Exp Bot 2011, 62:1951-1960. 10.1093/jxb/erq391
-
(2011)
J Exp Bot
, vol.62
, pp. 1951-1960
-
-
Wang, W.-S.1
Pan, Y.-J.2
Zhao, X.-Q.3
Dwivedi, D.4
Zhu, L.-H.5
Ali, J.6
Fu, B.-Y.7
Li, Z.-K.8
-
19
-
-
77957970301
-
Epigenetic modifications and human disease
-
Portela A, Esteller M: Epigenetic modifications and human disease. Nat Biotechnol 2010, 28:1057-1068. 10.1038/nbt.1685
-
(2010)
Nat Biotechnol
, vol.28
, pp. 1057-1068
-
-
Portela, A.1
Esteller, M.2
-
20
-
-
75649151209
-
Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus
-
Javierre BM, Fernandez AF, Richter J, Al-Shahrour F, Martin-Subero JI, Rodriguez-Ubreva J, Berdasco M, Fraga MF, O'Hanlon TP, Rider LG, Jacinto FV, Lopez-Longo FJ, Dopazo J, Forn M, Peinado MA, Carreño L, Sawalha AH, Harley JB, Siebert R, Esteller M, Miller FW, Ballestar E: Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus. Genome Res 2010, 20:170-179. 10.1101/gr.100289.109
-
(2010)
Genome Res
, vol.20
, pp. 170-179
-
-
Javierre, B.M.1
Fernandez, A.F.2
Richter, J.3
Al-Shahrour, F.4
Martin-Subero, J.I.5
Rodriguez-Ubreva, J.6
Berdasco, M.7
Fraga, M.F.8
O'Hanlon, T.P.9
Rider, L.G.10
Jacinto, F.V.11
Lopez-Longo, F.J.12
Dopazo, J.13
Forn, M.14
Peinado, M.A.15
Carreño, L.16
Sawalha, A.H.17
Harley, J.B.18
Siebert, R.19
Esteller, M.20
Miller, F.W.21
Ballestar, E.22
more..
-
21
-
-
84879255961
-
Comparison of genomic and epigenomic expression in monozygotic twins discordant for rett syndrome
-
Miyake K, Yang C, Minakuchi Y, Ohori K, Soutome M, Hirasawa T, Kazuki Y, Adachi N, Suzuki S, Itoh M, Goto Y-I, Andoh T, Kurosawa H, Oshimura M, Sasaki M, Toyoda A, Kubota T: Comparison of genomic and epigenomic expression in monozygotic twins discordant for rett syndrome. PLoS One 2013, 8:e66729. 10.1371/journal.pone.0066729
-
(2013)
PLoS One
, vol.8
, pp. e66729
-
-
Miyake, K.1
Yang, C.2
Minakuchi, Y.3
Ohori, K.4
Soutome, M.5
Hirasawa, T.6
Kazuki, Y.7
Adachi, N.8
Suzuki, S.9
Itoh, M.10
Goto, Y.-I.11
Andoh, T.12
Kurosawa, H.13
Oshimura, M.14
Sasaki, M.15
Toyoda, A.16
Kubota, T.17
-
22
-
-
34248195006
-
CpG methylation is targeted to transcription units in an invertebrate genome
-
Suzuki MM, Kerr ARW, De SD, Bird A: CpG methylation is targeted to transcription units in an invertebrate genome. Genome Res 2007, 17:625-631. 10.1101/gr.6163007
-
(2007)
Genome Res
, vol.17
, pp. 625-631
-
-
Suzuki, M.M.1
Kerr, A.R.W.2
De, S.D.3
Bird, A.4
-
23
-
-
77952355762
-
Genome-wide evolutionary analysis of eukaryotic DNA methylation
-
Zemach A, McDaniel IE, Silva P, Zilberman D: Genome-wide evolutionary analysis of eukaryotic DNA methylation. Science 2010, 328:916-919. 10.1126/science.1186366
-
(2010)
Science
, vol.328
, pp. 916-919
-
-
Zemach, A.1
McDaniel, I.E.2
Silva, P.3
Zilberman, D.4
-
24
-
-
78649955848
-
The honey bee epigenomes: differential methylation of brain DNA in queens and workers
-
Lyko F, Foret S, Kucharski R, Wolf S: The honey bee epigenomes: differential methylation of brain DNA in queens and workers. PLoS Biol 2011., 8:
-
(2011)
PLoS Biol
, pp. 8
-
-
Lyko, F.1
Foret, S.2
Kucharski, R.3
Wolf, S.4
-
25
-
-
84887312009
-
Function and evolution of DNA methylation in Nasonia vitripennis
-
Wang X, Wheeler D, Avery A, Rago A, Choi J-H, Colbourne JK, Clark AG, Werren JH: Function and evolution of DNA methylation in Nasonia vitripennis. PLoS Genet 2013, 9:e1003872. 10.1371/journal.pgen.1003872
-
(2013)
PLoS Genet
, vol.9
, pp. e1003872
-
-
Wang, X.1
Wheeler, D.2
Avery, A.3
Rago, A.4
Choi, J.-H.5
Colbourne, J.K.6
Clark, A.G.7
Werren, J.H.8
-
26
-
-
84867397446
-
Genome-wide and caste-specific DNA methylomes of the ants camponotus floridanus and harpegnathos saltator
-
Bonasio R, Li Q, Lian J, Mutti N, Jin L, Zhao H, Zhang P, Wen P, Xiang H, Ding Y, Jin Z, Shen SS, Wang Z, Wang W, Wang J, Berger SL, Liebig J, Zhang G, Reinberg D: Genome-wide and caste-specific DNA methylomes of the ants camponotus floridanus and harpegnathos saltator. Curr Biol 2012, 22:1755-1764. 10.1016/j.cub.2012.07.042
-
(2012)
Curr Biol
, vol.22
, pp. 1755-1764
-
-
Bonasio, R.1
Li, Q.2
Lian, J.3
Mutti, N.4
Jin, L.5
Zhao, H.6
Zhang, P.7
Wen, P.8
Xiang, H.9
Ding, Y.10
Jin, Z.11
Shen, S.S.12
Wang, Z.13
Wang, W.14
Wang, J.15
Berger, S.L.16
Liebig, J.17
Zhang, G.18
Reinberg, D.19
-
27
-
-
84876126685
-
Characterization of genome methylation patterns in the desert locust Schistocerca gregaria
-
Falckenhayn C, Boerjan B, Raddatz G, Frohme M, Schoofs L, Lyko F: Characterization of genome methylation patterns in the desert locust Schistocerca gregaria. J Exp Biol 2013, 216:1423-1429. 10.1242/jeb.080754
-
(2013)
J Exp Biol
, vol.216
, pp. 1423-1429
-
-
Falckenhayn, C.1
Boerjan, B.2
Raddatz, G.3
Frohme, M.4
Schoofs, L.5
Lyko, F.6
-
28
-
-
84864659030
-
The evolution of invertebrate gene body methylation
-
Sarda S, Zeng J, Hunt B, Soojin V: The evolution of invertebrate gene body methylation. Mol Biol Evol 2012, 29:1907-1916. 10.1093/molbev/mss062
-
(2012)
Mol Biol Evol
, vol.29
, pp. 1907-1916
-
-
Sarda, S.1
Zeng, J.2
Hunt, B.3
Soojin, V.4
-
29
-
-
77955974573
-
DNA methylation patterns provide insight into epigenetic regulation in the Pacific oyster (Crassostrea gigas)
-
Gavery M, Roberts S: DNA methylation patterns provide insight into epigenetic regulation in the Pacific oyster (Crassostrea gigas). BMC Genomics 2010, 11:483. 10.1186/1471-2164-11-483
-
(2010)
BMC Genomics
, vol.11
, pp. 483
-
-
Gavery, M.1
Roberts, S.2
-
30
-
-
81855206226
-
Comparative analyses of DNA methylation and sequence evolution using nasonia genomes
-
Park J, Peng Z, Zeng J, Elango N, Park T, Wheeler D, Werren JH, Yi SV: Comparative analyses of DNA methylation and sequence evolution using nasonia genomes. Mol Biol Evol 2011, 28:3345-3354. 10.1093/molbev/msr168
-
(2011)
Mol Biol Evol
, vol.28
, pp. 3345-3354
-
-
Park, J.1
Peng, Z.2
Zeng, J.3
Elango, N.4
Park, T.5
Wheeler, D.6
Werren, J.H.7
Yi, S.V.8
-
31
-
-
67650488920
-
DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera
-
Elango N, Hunt BG, Goodisman MAD, Yi SV: DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera. Proc Natl Acad Sci U S A 2009, 106:11206-11211. 10.1073/pnas.0900301106
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 11206-11211
-
-
Elango, N.1
Hunt, B.G.2
Goodisman, M.A.D.3
Yi, S.V.4
-
32
-
-
70449715419
-
Epigenetic regulation of the honey bee transcriptome: unravelling the nature of methylated genes
-
Foret S, Kucharski R, Pittelkow Y, Lockett GA, Maleszka R: Epigenetic regulation of the honey bee transcriptome: unravelling the nature of methylated genes. BMC Genomics 2009, 10:472. 10.1186/1471-2164-10-472
-
(2009)
BMC Genomics
, vol.10
, pp. 472
-
-
Foret, S.1
Kucharski, R.2
Pittelkow, Y.3
Lockett, G.A.4
Maleszka, R.5
-
33
-
-
77958479693
-
Functional conservation of DNA methylation in the pea aphid and the honeybee
-
Hunt B, Brisson J: Functional conservation of DNA methylation in the pea aphid and the honeybee. Genome Biol Evol 2010, 2:719-728.
-
(2010)
Genome Biol Evol
, vol.2
, pp. 719-728
-
-
Hunt, B.1
Brisson, J.2
-
34
-
-
41349085806
-
Nutritional control of reproductive status in honeybees via DNA methylation
-
Kucharski R, Maleszka J, Foret S, Maleszka R: Nutritional control of reproductive status in honeybees via DNA methylation. Science 2008, 319:1827-1830. 10.1126/science.1153069
-
(2008)
Science
, vol.319
, pp. 1827-1830
-
-
Kucharski, R.1
Maleszka, J.2
Foret, S.3
Maleszka, R.4
-
35
-
-
84859465140
-
DNA methylation dynamics, metabolic fluxes, gene splicing, and alternative phenotypes in honey bees
-
Foret S, Kucharski R, Pellegrini M, Feng S, Jacobsen SE, Robinson GE, Maleszka R: DNA methylation dynamics, metabolic fluxes, gene splicing, and alternative phenotypes in honey bees. Proc Natl Acad Sci U S A 2012, 109:4968-4973. 10.1073/pnas.1202392109
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 4968-4973
-
-
Foret, S.1
Kucharski, R.2
Pellegrini, M.3
Feng, S.4
Jacobsen, S.E.5
Robinson, G.E.6
Maleszka, R.7
-
36
-
-
77952123054
-
Single base-resolution methylome of the silkworm reveals a sparse epigenomic map
-
Xiang H, Zhu J, Chen Q, Dai F, Li X, Li M, Zhang H, Zhang G, Li D, Dong Y, Zhao L, Lin Y, Cheng D, Yu J, Sun J, Zhou X, Ma K, He Y, Zhao Y, Guo S, Ye M, Guo G, Li Y, Li R, Zhang X, Ma L, Kristiansen K, Guo Q, Jiang J, Beck S, Xia Q, Wang W, Wang J: Single base-resolution methylome of the silkworm reveals a sparse epigenomic map. Nat Biotechnol 2010, 28:516-520. 10.1038/nbt.1626
-
(2010)
Nat Biotechnol
, vol.28
, pp. 516-520
-
-
Xiang, H.1
Zhu, J.2
Chen, Q.3
Dai, F.4
Li, X.5
Li, M.6
Zhang, H.7
Zhang, G.8
Li, D.9
Dong, Y.10
Zhao, L.11
Lin, Y.12
Cheng, D.13
Yu, J.14
Sun, J.15
Zhou, X.16
Ma, K.17
He, Y.18
Zhao, Y.19
Guo, S.20
Ye, M.21
Guo, G.22
Li, Y.23
Li, R.24
Zhang, X.25
Ma, L.26
Kristiansen, K.27
Guo, Q.28
Jiang, J.29
Beck, S.30
Xia, Q.31
Wang, W.32
Wang, J.33
more..
-
37
-
-
0025299347
-
The expected equilibrium of the CpG dinucleotide in vertebrate genomes under a mutation model
-
Sved J, Bird A: The expected equilibrium of the CpG dinucleotide in vertebrate genomes under a mutation model. Proc Natl Acad Sci U S A 1990, 87:4692-4696. 10.1073/pnas.87.12.4692
-
(1990)
Proc Natl Acad Sci U S A
, vol.87
, pp. 4692-4696
-
-
Sved, J.1
Bird, A.2
-
38
-
-
80052640352
-
Deciphering a methylome: what can we read into patterns of DNA methylation?
-
Flores KB, Amdam GV: Deciphering a methylome: what can we read into patterns of DNA methylation? J Exp Biol 2011, 214:3155-3163. 10.1242/jeb.059741
-
(2011)
J Exp Biol
, vol.214
, pp. 3155-3163
-
-
Flores, K.B.1
Amdam, G.V.2
-
39
-
-
77958471357
-
Differential expression analysis for sequence count data
-
Anders S, Huber W: Differential expression analysis for sequence count data. Genome Biol 2010, 11:R106. 10.1186/gb-2010-11-10-r106
-
(2010)
Genome Biol
, vol.11
, pp. R106
-
-
Anders, S.1
Huber, W.2
-
40
-
-
80052099023
-
Profiling gene expression responses of coral larvae (Acropora millepora) to elevated temperature and settlement inducers using a novel RNA-Seq procedure
-
Meyer E, Aglyamova GV, Matz MV: Profiling gene expression responses of coral larvae (Acropora millepora) to elevated temperature and settlement inducers using a novel RNA-Seq procedure. Mol Ecol 2011, 20:3599-3616.
-
(2011)
Mol Ecol
, vol.20
, pp. 3599-3616
-
-
Meyer, E.1
Aglyamova, G.V.2
Matz, M.V.3
-
41
-
-
77950080387
-
The dynamic genome of Hydra
-
Chapman J, Kirkness E, Simakov O, Hampson SE, Mitros T, Thomas W, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH, Shu S, Blumberg B, Dana CE, Gee L, Kibler DF, Law L, Lindgens D, Martines DE, Peng J, et al.: The dynamic genome of Hydra. Nature 2010, 464:592-596. 10.1038/nature08830
-
(2010)
Nature
, vol.464
, pp. 592-596
-
-
Chapman, J.1
Kirkness, E.2
Simakov, O.3
Hampson, S.E.4
Mitros, T.5
Thomas, W.6
Rattei, T.7
Balasubramanian, P.G.8
Borman, J.9
Busam, D.10
Disbennett, K.11
Pfannkoch, C.12
Sumin, N.13
Sutton, G.G.14
Viswanathan, L.D.15
Walenz, B.16
Goodstein, D.M.17
Hellsten, U.18
Kawashima, T.19
Prochnik, S.E.20
Putnam, N.H.21
Shu, S.22
Blumberg, B.23
Dana, C.E.24
Gee, L.25
Kibler, D.F.26
Law, L.27
Lindgens, D.28
Martines, D.E.29
Peng, J.30
more..
-
42
-
-
84988984270
-
Thermal stress-related gene expression in corals with different Symbiodinium types
-
Rocker M, Willis B, Bay L: Thermal stress-related gene expression in corals with different Symbiodinium types. Proc 12th Int Coral Reef Symp 2012, 9:1-5.
-
(2012)
Proc 12th Int Coral Reef Symp
, vol.9
, pp. 1-5
-
-
Rocker, M.1
Willis, B.2
Bay, L.3
-
43
-
-
78651446504
-
Complex diel cycles of gene expression in coral-algal symbiosis
-
Levy O, Kaniewska P, Alon S, Eisenberg E, Karako-Lampert S, Bay LK, Reef R, Rodriguez-Lanetty M, Miller DJ, Hoegh-Guldberg O: Complex diel cycles of gene expression in coral-algal symbiosis. Science 2011,331(80):175.
-
(2011)
Science
, vol.331
, Issue.80
, pp. 175
-
-
Levy, O.1
Kaniewska, P.2
Alon, S.3
Eisenberg, E.4
Karako-Lampert, S.5
Bay, L.K.6
Reef, R.7
Rodriguez-Lanetty, M.8
Miller, D.J.9
Hoegh-Guldberg, O.10
-
44
-
-
84894556272
-
Extensive differences in gene expression between symbiotic and aposymbiotic cnidarians
-
Lehnert EM, Mouchka ME, Burriesci MS, Gallo ND, Schwarz JA, Pringle JR: Extensive differences in gene expression between symbiotic and aposymbiotic cnidarians. G3 2014, 4:277-295. 2014
-
(2014)
G3
, vol.4
, pp. 277-295
-
-
Lehnert, E.M.1
Mouchka, M.E.2
Burriesci, M.S.3
Gallo, N.D.4
Schwarz, J.A.5
Pringle, J.R.6
-
45
-
-
84891525312
-
Predominant intragenic methylation is associated with gene expression characteristics in a bivalve mollusc
-
Gavery MR, Roberts SB: Predominant intragenic methylation is associated with gene expression characteristics in a bivalve mollusc. Peer J 2013, 1:e215.
-
(2013)
Peer J
, vol.1
, pp. e215
-
-
Gavery, M.R.1
Roberts, S.B.2
-
46
-
-
84871962210
-
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
-
Batut P, Dobin A, Plessy C, Carninci P, Gingeras TR: High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Genome Res 2013, 23:169-180. 10.1101/gr.139618.112
-
(2013)
Genome Res
, vol.23
, pp. 169-180
-
-
Batut, P.1
Dobin, A.2
Plessy, C.3
Carninci, P.4
Gingeras, T.R.5
-
47
-
-
77954504873
-
Conserved role of intragenic DNA methylation in regulating alternative promoters
-
Maunakea AK, Nagarajan RP, Bilenky M, Ballinger TJ, Souza CD, Fouse SD, Johnson BE, Hong C, Nielsen C, Zhao Y, Turecki G, Delaney A, Varhol R, Thiessen N, Shchors K, Heine VM, Rowitch DH, Xing X, Fiore C, Schillebeeckx M, Jones SJM, Haussler D, Marra MA, Hirst M, Wang T, Costello JF: Conserved role of intragenic DNA methylation in regulating alternative promoters. Nature 2010, 466:253-257. 10.1038/nature09165
-
(2010)
Nature
, vol.466
, pp. 253-257
-
-
Maunakea, A.K.1
Nagarajan, R.P.2
Bilenky, M.3
Ballinger, T.J.4
Souza, C.D.5
Fouse, S.D.6
Johnson, B.E.7
Hong, C.8
Nielsen, C.9
Zhao, Y.10
Turecki, G.11
Delaney, A.12
Varhol, R.13
Thiessen, N.14
Shchors, K.15
Heine, V.M.16
Rowitch, D.H.17
Xing, X.18
Fiore, C.19
Schillebeeckx, M.20
Jones, S.J.M.21
Haussler, D.22
Marra, M.A.23
Hirst, M.24
Wang, T.25
Costello, J.F.26
more..
-
48
-
-
81855224754
-
Historical and contemporary factors shape the population genetic structure of the broadcast spawning coral, Acropora millepora, on the Great Barrier Reef
-
Van Oppen MJH, Peplow LM, Kininmonth S, Berkelmans R: Historical and contemporary factors shape the population genetic structure of the broadcast spawning coral, Acropora millepora, on the Great Barrier Reef. Mol Ecol 2011, 20:4899-4914. 10.1111/j.1365-294X.2011.05328.x
-
(2011)
Mol Ecol
, vol.20
, pp. 4899-4914
-
-
Van Oppen, M.J.H.1
Peplow, L.M.2
Kininmonth, S.3
Berkelmans, R.4
-
49
-
-
84890110060
-
Cryptic variation in morphological evolution: HSP90 as a capacitor for loss of eyes in cavefish
-
Rohner N, Jarosz DF, Kowalko JE, Yoshizawa M, Jeffery WR, Borowsky RL, Lindquist S, Tabin CJ: Cryptic variation in morphological evolution: HSP90 as a capacitor for loss of eyes in cavefish. Science 2013, 342:1372-1375. 10.1126/science.1240276
-
(2013)
Science
, vol.342
, pp. 1372-1375
-
-
Rohner, N.1
Jarosz, D.F.2
Kowalko, J.E.3
Yoshizawa, M.4
Jeffery, W.R.5
Borowsky, R.L.6
Lindquist, S.7
Tabin, C.J.8
-
50
-
-
84876683784
-
DNA methylation and transcriptional noise
-
Huh I, Zeng J, Park T, Yi SV: DNA methylation and transcriptional noise. Epigenetics Chromatin 2013, 6:9. 10.1186/1756-8935-6-9
-
(2013)
Epigenetics Chromatin
, vol.6
, pp. 9
-
-
Huh, I.1
Zeng, J.2
Park, T.3
Yi, S.V.4
-
51
-
-
33745220278
-
Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise
-
Newman JRS, Ghaemmaghami S, Ihmels J, Breslow DK, Noble M, DeRisi JL, Weissman JS: Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise. Nature 2006, 441:840-846. 10.1038/nature04785
-
(2006)
Nature
, vol.441
, pp. 840-846
-
-
Newman, J.R.S.1
Ghaemmaghami, S.2
Ihmels, J.3
Breslow, D.K.4
Noble, M.5
DeRisi, J.L.6
Weissman, J.S.7
-
52
-
-
84885948837
-
DNA methylation is crucial for the early development in the Oyster C. gigas
-
Riviere G, Wu G-C, Fellous A, Goux D, Sourdaine P, Favrel P: DNA methylation is crucial for the early development in the Oyster C. gigas. Mar Biotechnol (NY) 2013, 15:739-753. 10.1007/s10126-013-9523-2
-
(2013)
Mar Biotechnol (NY)
, vol.15
, pp. 739-753
-
-
Riviere, G.1
Wu, G.-C.2
Fellous, A.3
Goux, D.4
Sourdaine, P.5
Favrel, P.6
-
53
-
-
84882450971
-
Gene expression under chronic heat stress in populations of the mustard hill coral (Porites astreoides) from different thermal environments
-
Kenkel CD, Meyer E, Matz MV: Gene expression under chronic heat stress in populations of the mustard hill coral (Porites astreoides) from different thermal environments. Mol Ecol 2013, 22:4322-4334. 10.1111/mec.12390
-
(2013)
Mol Ecol
, vol.22
, pp. 4322-4334
-
-
Kenkel, C.D.1
Meyer, E.2
Matz, M.V.3
-
54
-
-
70350302640
-
Genetic variation in responses to a settlement cue and elevated temperature in the reef-building coral Acropora millepora
-
Meyer E, Davies S, Wang S, Willis B, Abrego D, Juenger T, Matz M: Genetic variation in responses to a settlement cue and elevated temperature in the reef-building coral Acropora millepora. Mar Ecol Prog Ser 2009, 392:81-92.
-
(2009)
Mar Ecol Prog Ser
, vol.392
, pp. 81-92
-
-
Meyer, E.1
Davies, S.2
Wang, S.3
Willis, B.4
Abrego, D.5
Juenger, T.6
Matz, M.7
-
55
-
-
84925653631
-
Climate change in the oceans: evolutionary versus phenotypically plastic responses of marine animals and plants
-
Evol Appl 2013. ISSN 1752-4571
-
Reusch TBH: Climate change in the oceans: evolutionary versus phenotypically plastic responses of marine animals and plants. Evol Appl 2013. ISSN 1752-4571
-
(2013)
-
-
Reusch, T.B.H.1
-
56
-
-
84878951319
-
Identifying the world's most climate change vulnerable species: a systematic trait-based assessment of all birds, amphibians and corals
-
Foden WB, Butchart SHM, Stuart SN, Vié J-C, Akçakaya HR, Angulo A, DeVantier LM, Gutsche A, Turak E, Cao L, Donner SD, Katariya V, Bernard R, Holland RA, Hughes AF, O'Hanlon SE, Garnett ST, Sekercioglu CH, Mace GM: Identifying the world's most climate change vulnerable species: a systematic trait-based assessment of all birds, amphibians and corals. PLoS One 2013, 8:e65427. 10.1371/journal.pone.0065427
-
(2013)
PLoS One
, vol.8
, pp. e65427
-
-
Foden, W.B.1
Butchart, S.H.M.2
Stuart, S.N.3
Vié, J.-C.4
Akçakaya, H.R.5
Angulo, A.6
DeVantier, L.M.7
Gutsche, A.8
Turak, E.9
Cao, L.10
Donner, S.D.11
Katariya, V.12
Bernard, R.13
Holland, R.A.14
Hughes, A.F.15
O'Hanlon, S.E.16
Garnett, S.T.17
Sekercioglu, C.H.18
Mace, G.M.19
-
57
-
-
84860528360
-
2-driven acidification during the initiation of calcification
-
2 -driven acidification during the initiation of calcification. Mol Ecol 2012, 21:2440-2454. 10.1111/j.1365-294X.2012.05554.x
-
(2012)
Mol Ecol
, vol.21
, pp. 2440-2454
-
-
Moya, A.1
Huisman, L.2
Ball, E.E.3
Hayward, D.C.4
Grasso, L.C.5
Chua, C.M.6
Woo, H.N.7
Gattuso, J.-P.8
Forêt, S.9
Miller, D.J.10
-
58
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25:3389-3402. 10.1093/nar/25.17.3389
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
59
-
-
34447300950
-
Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization
-
Putnam NH, Srivastava M, Hellsten U, Dirks B, Chapman J, Salamov A, Terry A, Shapiro H, Lindquist E, Kapitonov VV, Jurka J, Genikhovich G, Grigoriev IV, Lucas SM, Steele RE, Finnerty JR, Technau U, Martindale MQ, Rokhsar DS: Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization. Science 2007, 317:86-94. 10.1126/science.1139158
-
(2007)
Science
, vol.317
, pp. 86-94
-
-
Putnam, N.H.1
Srivastava, M.2
Hellsten, U.3
Dirks, B.4
Chapman, J.5
Salamov, A.6
Terry, A.7
Shapiro, H.8
Lindquist, E.9
Kapitonov, V.V.10
Jurka, J.11
Genikhovich, G.12
Grigoriev, I.V.13
Lucas, S.M.14
Steele, R.E.15
Finnerty, J.R.16
Technau, U.17
Martindale, M.Q.18
Rokhsar, D.S.19
-
60
-
-
84880875554
-
KEGG orthology-based annotation of the predicted proteome of Acropora digitifera: ZoophyteBase - an open access and searchable database of a coral genome
-
Dunlap WC, Starcevic A, Baranasic D, Diminic J, Zucko J, Gacesa R, van Oppen MJ, Hranueli D, Cullum J, Long PF: KEGG orthology-based annotation of the predicted proteome of Acropora digitifera: ZoophyteBase - an open access and searchable database of a coral genome. BMC Genomics 2013, 14:509. 10.1186/1471-2164-14-509
-
(2013)
BMC Genomics
, vol.14
, pp. 509
-
-
Dunlap, W.C.1
Starcevic, A.2
Baranasic, D.3
Diminic, J.4
Zucko, J.5
Gacesa, R.6
van Oppen, M.J.7
Hranueli, D.8
Cullum, J.9
Long, P.F.10
-
61
-
-
84874724662
-
Update on activities at the Universal Protein Resource (UniProt) in 2013
-
Consortium TU: Update on activities at the Universal Protein Resource (UniProt) in 2013. Nucleic Acids Res 2013, 41:43-47.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 43-47
-
-
Consortium, T.U.1
-
62
-
-
33846820527
-
Model-based methods of classification: using the mclust Software in Chemometrics
-
Fraley C, Raftery AE: Model-based methods of classification: using the mclust Software in Chemometrics. J Stat Softw 2007, 18:1-13. 10.1360/jos180001
-
(2007)
J Stat Softw
, vol.18
, pp. 1-13
-
-
Fraley, C.1
Raftery, A.E.2
-
63
-
-
84863304598
-
R: a language and environment for statistical computing
-
Team RC: R: a language and environment for statistical computing. 2013.
-
(2013)
-
-
-
65
-
-
0002386913
-
On the interpretation of χ2 from contingency tables, and the calculation of P
-
Fisher RA: On the interpretation of χ2 from contingency tables, and the calculation of P. J R Stat Soc 1922, 85:87-94. 10.2307/2340521
-
(1922)
J R Stat Soc
, vol.85
, pp. 87-94
-
-
Fisher, R.A.1
-
66
-
-
0001677717
-
Controlling the false discovery rate: a practical and powerful approach to multiple testing
-
Bejamini Y, Hochberg Y: Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc 1995, 57:289-300.
-
(1995)
J R Stat Soc
, vol.57
, pp. 289-300
-
-
Bejamini, Y.1
Hochberg, Y.2
|