Age-associated alterations in the somatic mutation level in Arabidopsis thaliana

Plant Growth Regulation

Volumn 75, Issue 2, 2015, Pages 493-501

  Kiselev, K V ^a,b   Tyunin, A P ^a   Ogneva, Z V ^a,b   Dubrovina, A S ^a  

^a INSTITUTE OF BIOLOGY AND SOIL SCIENCE   (Russian Federation)

^b FAR EASTERN FEDERAL UNIVERSITY   (Russian Federation)

Author keywords

Arabidopsis thaliana; Deletions; Insertions; Nucleotide substitutions; Plant ageing; Somatic mutations

Indexed keywords

EID: 84925482739     PISSN: 01676903     EISSN: 15735087     Source Type: Journal    
DOI: 10.1007/s10725-014-0012-z     Document Type: Article

References (36)

1. Akiyama M, Kyoizumi S, Hirai Y, Kusunoki Y, Iwamoto KS, Nakamura N (1995) Mutation frequency in human blood cells increases with age. Mutat Res 338:141–149
2. Ally D, Ritland K, Otto SP (2010) Aging in a long-lived clonal tree. PLoS Biol 8:1–8
3. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410
4. Britt AB (1996) DNA damage and repair in plants. Annu Rev Plant Physiol Plant Mol Biol 47:75–100
5. Brutovská E, Sámelová A, Dušička J, Mičieta K (2013) Ageing of trees: application of general ageing theories. Ageing Res Rev 12:855–866
6. Buss LW (1983) Evolution, development, and the units of selection. Proc Natl Acad Sci USA 80:1387–1391
7. Caetano-anollés G (1999) High genome-wide mutation rates in vegetatively propagated bermudagrass. Mol Ecol 8:1211–1221
8. Dolle ME, Snyder WK, Gossen JA, Lohman PH, Vijg J (2000) Distinct spectra of somatic mutations accumulated with age in mouse heart and small intestine. Proc Natl Acad Sci USA 97:8403–8408
9. Drake JW, Charlesworth B, Charlesworth D, Crow JF (1998) Rates of spontaneous mutation. Genetics 148:1667–1686
10. Echt CS, Erdahl LA, McCoy TJ (1992) Genetic segregation of random amplified polymorphic DNA in diploid cultivated alfalfa. Genome 35:84–87
11. Failla G (1958) The aging process and cancerogenesis. Ann NY Acad Sci 71:1124–1135
12. Golubov A, Yao Y, Maheshwari P, Bilichak A, Boyko A, Belzile F, Kovalchuk I (2010) Microsatellite instability in Arabidopsis increases with plant development. Plant Physiol 154:1415–1427
13. Jones IM, Thomas CB, Tucker B, Thompson CL, Pleshanov P, Vorobtsova I, Moore DH (1995) Impact of age and environment on somatic mutation at the hprt gene of T lymphocytes in humans. Mutat Res 338:129–139
14. Kennedy SR, Loeb LA, Herr AJ (2012) Somatic mutations in aging, cancer and neurodegeneration. Mech Ageing Dev 133:118–126
15. Kiselev KV, Turlenko AV, Tchernoded GK, Zhuravlev YN (2009) Nucleotide substitutions in rolC and nptII gene sequences during long-term cultivation of Panax ginseng cell cultures. Plant Cell Rep 28:1273–1278
16. Kiselev KV, Shumakova OA, Tchernoded GK (2011) Mutation of Panax ginseng genes during long-term cultivation of ginseng cell cultures. J Plant Physiol 168:1280–1285
17. Kiselev KV, Shumakova OA, Manyakhin AY, Mazeika AN (2012) Influence of calcium influx induced by the calcium ionophore, A23187, on resveratrol content and the expression of CDPK and STS genes in the cell cultures of Vitis amurensis. Plant Growth Regul 68:371–381
18. Kiselev KV, Dubrovina AS, Shumakova OA (2013) DNA mutagenesis in 2- and 20-year-old Panax ginseng cell cultures. In Vitro Cell Dev Biol-Plant 49:175–182
19. Kondrashov AS (1998) Measuring spontaneous deleterious mutation. Genetica 102(103):183–197
20. Lombard DB, Chua KF, Mostoslavsky R, Franco S, Gostissa M, Alt FW (2005) DNA repair, genome stability, and aging. Cell 120:497–512
21. Müller J, Sigel RK, Lippert B (2000) Heavy metal mutagenicity: insights from bioinorganic model chemistry. J Inorg Biochem 79:261–265
22. Moskalev AA, Shaposhnikov MV, Plyusnina EN, Zhavoronkov A, Budovsky A, Yanai H, Fraifeld VE (2013) The role of DNA damage and repair in aging through the prism of Koch-like criteria. Ageing Res Rev 12:661–684
23. Munne-Bosch S (2008) Do perennials really senesce? Trends Plant Sci 13:216–220
24. Noro Y, Takano-Shimizu T, Syono K, Kishima Y, Sano Y (2007) Genetic variations in rice in vitro cultures at the EPSPs–RPS20 region. Theor Appl Genet 114:705–711
25. Ossowski S, Schneeberger K, Lucas-Lledó JI, Warthmann N, Clark RM, Shaw RG, Weigel D, Lynch M (2010) The rate and molecular spectrum of spontaneous mutations in Arabidopsisthaliana. Science 327:92–94
26. Pla M, Jofré A, Martell M, Molinas M, Gómez J (2000) Large accumulation of mRNA and DNA point modifications in a plant senescent tissue. FEBS Lett 472:14–16
27. Rotskaya UN, Rogozin IB, Vasyunina EA, Malyarchuk BA, Nevinsky GA, Sinitsyna OI (2010) High frequency of somatic mutations in rat liver mitochondrial DNA. Mutat Res 685:97–102
28. Smith KC (1992) Spontaneous mutagenesis: experimental, genetic and other factors. Mutat Res 277:139–162
29. Szilard L (1959) On the nature of the aging process. Proc Natl Acad Sci USA 45:35–45
30. Thomas H (2002) Ageing in plants. Mech Ageing Dev 123:747–753
31. Thomas H (2013) Senescence, ageing and death of the whole plant. New Phytol 197:696–711
32. Tucker JD, Spruill MD, Ramsey MJ, Director AD, Nath J (1999) Frequency of spontaneous chromosome aberrations in mice: effects of age. Mutat Res 425:135–141
33. Tuteja N, Singh MB, Misra MK, Bhalla PL, Tuteja R (2001) Molecular mechanisms of DNA damage and repair: progress in plants. Crit Rev Biochem Mol Biol 36:337–397
34. Vijg J (2000) Somatic mutations and aging: a re-evaluation. Mutat Res 447:117–135
35. Vijg J (2004) Impact of genome instability on transcription regulation of aging and senescence. Mech Ageing Dev 125:747–753
36. Vijg J, Suh Y (2013) Genome instability and aging. Annu Rev Physiol 75:645–668