Identification of mVOCs from Andean Rhizobacteria and Field Evaluation of Bacterial and Mycorrhizal Inoculants on Growth of Potato in its Center of Origin

Microbial Ecology

Volumn 69, Issue 3, 2015, Pages 652-667

  Velivelli, Siva L S ^a   Kromann, Peter ^b   Lojan, Paul ^c   Rojas, Mercy ^d   Franco, Javier ^e   Suarez, Juan Pablo ^c   Prestwich, Barbara Doyle ^a  

^a UNIVERSITY COLLEGE CORK   (Ireland)

^b International Potato Centre Quito   (Ecuador)

^c UNIVERSIDAD TÉCNICA PARTICULAR DE LOJA   (Ecuador)

^d INTERNATIONAL POTATO CENTER   (Peru)

^e Fundacion Promocion e Investigacion de Productos Andinos Bolivia   (Bolivia)

Author keywords

AMF; Andean potato; Biocontrol; mVOCs; Rhizobacteria; Sustainability

Indexed keywords

FUNGICIDE; VOLATILE ORGANIC COMPOUND;

BACTERIUM; BOLIVIA; CHEMISTRY; DRUG EFFECTS; ECUADOR; GROWTH, DEVELOPMENT AND AGING; ISOLATION AND PURIFICATION; MASS FRAGMENTOGRAPHY; MICROBIOLOGY; MYCORRHIZA; PERU; PLANT ROOT; POTATO; RHIZOCTONIA; SOLID PHASE MICROEXTRACTION;

BACTERIA; BOLIVIA; ECUADOR; FUNGICIDES, INDUSTRIAL; GAS CHROMATOGRAPHY-MASS SPECTROMETRY; MYCORRHIZAE; PERU; PLANT ROOTS; RHIZOCTONIA; SOIL MICROBIOLOGY; SOLANUM TUBEROSUM; SOLID PHASE MICROEXTRACTION; VOLATILE ORGANIC COMPOUNDS;

EID: 84925461214     PISSN: 00953628     EISSN: 1432184X     Source Type: Journal    
DOI: 10.1007/s00248-014-0514-2     Document Type: Article

References (42)

1. Ampofo JA, Tetteh W, Bello M (2009) Impact of commonly used agrochemicals on bacterial diversity in cultivated soils. Indian J Microbiol 49:223–229. doi:10.1007/s12088-009-0042-9
2. Adesemoye AO, Kloepper JW (2009) Plant-microbes interactions in enhanced fertilizer-use efficiency. Appl Microbiol Biotechnol 85:1–12. doi:10.1007/s00253-009-2196-0
3. Kloeppe JW, Rodríguez-Kábana R, Zehnder AW, Murphy JF, Sikora E, Fernández C (1999) Plant root-bacterial interactions in biological control of soilborne diseases and potential extension to systemic and foliar diseases. Australas Plant Pathol 28:21–26. doi:10.1071/AP99003
4. Ryu C-M, Hu C-H, Locy R, Kloepper J (2005) Study of mechanisms for plant growth-promotion elicited by rhizobacteria in Arabidopsis thaliana. Plant Soil 268:285–292. doi:10.1007/s11104-004-0301-9
5. Schüβler A, Schwarzott D, Walker C (2001) A new fungal phylum, the Glomeromycota: phylogeny and evolution. Mycol Res 105:1413–1421. doi:10.1017/S0953756201005196
6. Senés-Guerrero C, Torres-Cortés G, Pfeiffer S, Rojas M, Schüßler A (2014) Potato-associated arbuscular mycorrhizal fungal communities in the Peruvian Andes. Mycorrhiza 24:405–417. doi:10.1007/s00572-013-0549-0
7. Vespermann A, Kai M, Piechulla B (2007) Rhizobacterial volatiles affect the growth of fungi and Arabidopsis thaliana. Appl Environ Microbiol 73:5639–5641. doi:10.1128/aem. 01078-07
8. Effmert U, Kalderás J, Warnke R, Piechulla B (2012) Volatile mediated interactions between bacteria and fungi in the soil. J Chem Ecol 38:665–703. doi:10.1007/s10886-012-0135-5
9. Ryu C-M, Farag MA, Hu C-H, Reddy MS, Wei H-X, Paré PW, Kloepper JW (2003) Bacterial volatiles promote growth in Arabidopsis. Proc Natl Acad Sci 100:4927–4932. doi:10.1073/pnas.0730845100
10. Ryu C-M, Farag MA, Hu C-H, Reddy MS, Kloepper JW, Paré PW (2004) Bacterial volatiles induce systemic resistance in Arabidopsis. Plant Physiol 134:1017–1026. doi:10.1104/pp. 103.026583
11. Velázquez-Becerra C, Macías-Rodríguez L, López-Bucio J, Altamirano-Hernández J, Flores-Cortez I, Valencia-Cantero E (2011) A volatile organic compound analysis from Arthrobacter agilis identifies dimethylhexadecylamine, an amino-containing lipid modulating bacterial growth and Medicago sativa morphogenesis in vitro. Plant Soil 339:329–340. doi:10.1007/s11104-010-0583-z
12. Zou C, Li Z, Yu D (2010) Bacillus megaterium strain XTBG34 promotes plant growth by producing 2-pentylfuran. J Microbiol 48:460–466. doi:10.1007/s12275-010-0068-z
13. Blom D, Fabbri C, Connor EC, Schiestl FP, Klauser DR, Boller T, Eberl L, Weisskopf L (2011) Production of plant growth modulating volatiles is widespread among rhizosphere bacteria and strongly depends on culture conditions. Environ Microbiol 13:3047–3058. doi:10.1111/j.1462-2920.2011.02582.x
14. Yu S-M, Lee Y (2013) Plant growth promoting rhizobacterium Proteus vulgaris JBLS202 stimulates the seedling growth of Chinese cabbage through indole emission. Plant Soil 370:485–495. doi:10.1007/s11104-013-1652-x
15. Groenhagen U, Baumgartner R, Bailly A, Gardiner A, Eberl L, Schulz S, Weisskopf L (2013) Production of bioactive volatiles by different Burkholderia ambifaria strains. J Chem Ecol 39:892–906. doi:10.1007/s10886-013-0315-y
16. Blom D, Fabbri C, Eberl L, Weisskopf L (2010) Volatile-mediated killing of Arabidopsis thaliana by bacteria is mainly due to hydrogen cyanide. Appl Environ Microbiol 77:1000–1008. doi:10.1128/aem. 01968-10
17. Kai M, Crespo E, Cristescu SM, Harren FJ, Francke W, Piechulla B (2010) Serratia odorifera: analysis of volatile emission and biological impact of volatile compounds on Arabidopsis thaliana. Appl Microbiol Biotechnol 88:965–976. doi:10.1007/s00253-010-2810-1
18. Weise T, Kai M, Piechulla B (2013) Bacterial ammonia causes significant plant growth inhibition. PLoS ONE 8:e63538. doi:10.1371/journal.pone.0063538
19. Fernando WGD, Ramarathnam R, Krishnamoorthy AS, Savchuk SC (2005) Identification and use of potential bacterial organic antifungal volatiles in biocontrol. Soil Biol Biochem 37:955–964. doi:10.1016/j.soilbio.2004.10.021
20. Yuan J, Raza W, Shen Q, Huang Q (2012) Antifungal activity of Bacillus amyloliquefaciens NJN-6 volatile compounds against Fusarium oxysporum f. sp. cubense. Appl Environ Microbiol 78:5942–5944. doi:10.1128/aem. 01357-12
21. Ghyselinck J, Velivelli SL, Heylen K, O’Herlihy E, Franco J, Rojas M, De Vos P, Prestwich BD (2013) Bioprospecting in potato fields in the Central Andean Highlands: screening of rhizobacteria for plant growth-promoting properties. Syst Appl Microbiol 36:116–127. doi:10.1016/j.syapm.2012.11.007
22. Velivelli S, O’Herlihy E, Janczura B, Doyle Prestwich B, Ghyselinck J, De Vos P (2012) Efficacy of rhizobacteria on plant growth-promotion and disease suppression in vitro. Acta Horticult 961:525–532
23. Athukorala SNP, Fernando WGD, Rashid KY, de Kievit T (2010) The role of volatile and non-volatile antibiotics produced by Pseudomonas chlororaphis strain PA23 in its root colonization and control of Sclerotinia sclerotiorum. Biocontrol Sci Tech 20:875–890. doi:10.1080/09583157.2010.484484
24. Farag MA, Ryu C-M, Sumner LW, Paré PW (2006) GC–MS SPME profiling of rhizobacterial volatiles reveals prospective inducers of growth promotion and induced systemic resistance in plants. Phytochemistry 67:2262–2268. doi:10.1016/j.phytochem.2006.07.021
25. Jones DL, Nguyen C, Finlay RD (2009) Carbon flow in the rhizosphere: carbon trading at the soil–root interface. Plant Soil 321:5–33. doi:10.1007/s11104-009-9925-0
26. Kai M, Effmert U, Berg G, Piechulla B (2007) Volatiles of bacterial antagonists inhibit mycelial growth of the plant pathogen Rhizoctonia solani. Arch Microbiol 187:351–360. doi:10.1007/s00203-006-0199-0
27. Sang MK, Kim JD, Kim BS, Kim KD (2011) Root treatment with rhizobacteria antagonistic to Phytophthora blight affects anthracnose occurrence, ripening, and yield of pepper fruit in the plastic house and field. Phytopathology 101:666–678. doi:10.1094/phyto-08-10-0224
28. Kai M, Haustein M, Molina F, Petri A, Scholz B, Piechulla B (2009) Bacterial volatiles and their action potential. Appl Microbiol Biotechnol 81:1001–1012. doi:10.1007/s00253-008-1760-3
29. Dandurishvili N, Toklikishvili N, Ovadis M, Eliashvili P, Giorgobiani N, Keshelava R, Tediashvili M, Vainstein A, Khmel I, Szegedi E, Chernin L (2011) Broad-range antagonistic rhizobacteria Pseudomonas fluorescens and Serratia plymuthica suppress Agrobacterium crown gall tumours on tomato plants. J Appl Microbiol 110:341–352. doi:10.1111/j.1365-2672.2010.04891.x
30. Zou C-S, Mo M-H, Gu Y-Q, Zhou J-P, Zhang K-Q (2007) Possible contributions of volatile-producing bacteria to soil fungistasis. Soil Biol Biochem 39:2371–2379. doi:10.1016/j.soilbio.2007.04.009
31. Fiddaman PJ, Rossall S (1993) The production of antifungal volatiles by Bacillus subtilis. J Appl Bacteriol 74:119–126. doi:10.1111/j.1365-2672.1993.tb03004.x
32. Fiddaman PJ, Rossall S (1994) Effect of substrate on the production of antifungal volatiles from Bacillus subtilis. J Appl Bacteriol 76:395–405
33. Weise T, Kai M, Gummesson A, Troeger A, von Reuss S, Piepenborn S, Kosterka F, Sklorz M, Zimmermann R, Francke W, Piechulla B (2012) Volatile organic compounds produced by the phytopathogenic bacterium Xanthomonas campestris pv. vesicatoria 85–10. Beilstein J Org Chem 8:579–596. doi:10.3762/bjoc.8.65
34. Nicholson WL (2008) The Bacillus subtilis ydjL (bdhA) gene encodes acetoin reductase/2,3-butanediol dehydrogenase. Appl Environ Microbiol 74:6832–6838. doi:10.1128/aem. 00881-08
35. Marquez-Villavicencio MP, Weber B, Witherell RA, Willis DK, Charkowski AO (2011) The 3-hydroxy-2-butanone pathway is required for Pectobacterium carotovorum pathogenesis. PLoS ONE 6:e22974. doi:10.1371/journal.pone.0022974
36. Huang C-J, Tsay J-F, Chang S-Y, Yang H-P, Wu W-S, Chen C-Y (2012) Dimethyl disulfide is an induced systemic resistance elicitor produced by Bacillus cereus C1L. Pest Manag Sci 68:1306–1310. doi:10.1002/ps.3301
37. Song G, Ryu C-M (2013) Two volatile organic compounds trigger plant self-defense against a bacterial pathogen and a sucking insect in cucumber under open field conditions. Int J Mol Sci 14:9803–9819
38. Spinelli F, Cellini A, Vanneste J, Rodriguez-Estrada M, Costa G, Savioli S, Harren FM, Cristescu S (2012) Emission of volatile compounds by Erwinia amylovora: biological activity in vitro and possible exploitation for bacterial identification. Trees 26:141–152. doi:10.1007/s00468-011-0667-2
39. de Faria, S.M., Resende A.S., Júnior O.J.S., Boddey, R.M.: Exploiting mycorrhizae and Rhizobium symbioses to recover seriously gegraded soils. In: Polacco, JC, Todd, CD (eds.) Ecological Aspects of Nitrogen Metabolism in Plants. John Wiley & Sons, Inc., pp. 195–215. (2011)
40. Compant S, Duffy B, Nowak J, Clément C, Barka EA (2005) Use of plant growth-promoting bacteria for biocontrol of plant diseases: principles, mechanisms of action, and future prospects. Appl Environ Microbiol 71:4951–4959. doi:10.1128/aem. 71.9.4951-4959.2005
41. Lugtenberg B, Kamilova F (2009) Plant growth-promoting rhizobacteria. Annu Rev Microbiol 63:541–556. doi:10.1146/annurev.micro.62.081307.162918
42. Glick BR (2012) Plant growth-promoting bacteria: mechanisms and applications. Sci 2012:15. doi:10.6064/2012/963401