Head-to-head comparison of two popular cortical thickness extraction algorithms: A cross-sectional and longitudinal study

PLoS ONE

Volumn 10, Issue 3, 2015, Pages

  Redolfi, Alberto ^a   Manset, David ^b   Barkhof, Frederik ^c   Wahlund, Lars Olof ^d   Glatard, Tristan ^e,f   Mangin, Jean Franҫois ^g   Frisoni, Giovanni B ^a,h  

^a IRCCS ISTITUTO CENTRO SAN GIOVANNI DI DIO FATEBENEFRATELLI   (Italy)

^b GNUBILA France   (France)

^c VU UNIVERSITY MEDICAL CENTER   (Netherlands)

^d KAROLINSKA INSTITUTE   (Sweden)

^e UNIVERSITÉ DE LYON   (France)

^f MCGILL UNIVERSITY   (Canada)

^g NeuroSpin   (France)

^h UNIVERSITY OF GENEVA   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

AGED; ALGORITHM; ALZHEIMER DISEASE; ARTICLE; BRAIN ATROPHY; COMPARATIVE STUDY; CONTROLLED STUDY; CORRELATION ANALYSIS; CORTICAL THICKNESS (BRAIN); CROSS-SECTIONAL STUDY; DISCRIMINANT ANALYSIS; EFFECT SIZE; EXTRACTION ALGORITHM; FEMALE; FRONTAL CORTEX; HIPPOCAMPUS; HUMAN; LONGITUDINAL STUDY; MAJOR CLINICAL STUDY; MALE; MEASUREMENT; MINI MENTAL STATE EXAMINATION; OCCIPITAL CORTEX; PARIETAL CORTEX; SUPRAMARGINAL GYRUS; TEMPORAL CORTEX; TEMPORAL GYRUS; VOLUMETRY; BRAIN; COGNITIVE DYSFUNCTION; IMAGE PROCESSING; NUCLEAR MAGNETIC RESONANCE IMAGING; PATHOLOGY; PATHOPHYSIOLOGY; PROCEDURES; RECEIVER OPERATING CHARACTERISTIC; SENSITIVITY AND SPECIFICITY;

AGED; ALGORITHMS; ALZHEIMER DISEASE; BRAIN; COGNITIVE DYSFUNCTION; CROSS-SECTIONAL STUDIES; FEMALE; HIPPOCAMPUS; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; LONGITUDINAL STUDIES; MAGNETIC RESONANCE IMAGING; MALE; ROC CURVE; SENSITIVITY AND SPECIFICITY;

EID: 84924985634     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0117692     Document Type: Article

References (43)

1. Fox NC, Kennedy J (2009) Structural imaging markers for therapeutic trials in Alzheimer's disease. J Nutr 13(4): 350-352.
2. Jack CR Jr, Shiung MM, Gunter JL, O'Brien PC, Weigand SD, et al. (2004) Comparison of different MRI brain atrophy rate measures with clinical disease progression in AD. Neurology 62(4): 591-600. PMID: 14981176
3. Fox NC, Black RS, Gilman S, Rossor MN, Griffith SG, et al. (2005) Effects of Abeta immunization (AN1792) on MRI measures of cerebral volume in Alzheimer disease. Neurology 64(9): 1563-1572. PMID: 15883317
4. Thompson P, Hayashi KM, Zubicaray G, Janke AL, Rose SE, et al. (2003) Dynamics of gray matter loss in Alzheimer's disease. J Neurosci 23: 994-1005. PMID: 12574429
5. Han X, Jovicich J, Salat D, van der Kouwe A, Quinn B, et al. (2006) Reliability of MRI-derived measurements of human cerebral cortical thickness: the effects of field strength, scanner upgrade and manufacturer. Neuroimage 32(1): 180-94. PMID: 16651008
6. Dickerson BC, Sperling RA (2005) Neuroimaging biomarkers for clinical trials of disease-modifying therapies in Alzheimer's disease. NeuroRx 2: 348-360. PMID: 15897955
7. MacDonald D, Kabani N, Avis D, Evans AC (2000) Automated 3-D extraction of inner and outer surfaces of cerebral cortex from MRI. Neuroimage 12(3): 340-356. PMID: 10944416
8. Fischl B, Dale AM (2000) Measuring the thickness of the human cerebral cortex from magnetic resonance images. Proc Natl Acad Sci U S A 97(20): 11050-11055. PMID: 10984517
9. Dahnke R, Yotter RA, Gaser C (2013) Cortical thickness and central surface estimation. Neuroimage 65:336-48. doi: 10.1016/j.neuroimage.2012.09.050 PMID: 23041529
10. Kim JS, Singh V, Lee JK, Lerch J, Ad-Dab' bagh Y, et al. (2005) Automated 3-D extraction and evaluation of the inner and outer cortical surfaces using a laplacian map and partial volume effect classification. Neuroimage 27(1): 210-221. PMID: 15896981
11. Dale AM, Fischl B, Sereno MI (1999) Cortical surface-based analysis. I. segmentation and surface reconstruction. Neuroimage 9(2): 179-194. PMID: 9931268
12. Frisoni GB, Fox NC, Jack CR Jr, Scheltens P, Thompson PM (2010) The clinical use of structural MRI in Alzheimer disease. Nat Rev Neurol 6(2): 67-77. doi: 10.1038/nrneurol.2009.215 PMID: 20139996
13. Clarkson MJ, Cardoso MJ, Ridgway GR, Modat M, Leung KK, et al. (2011) A comparison of voxel and surface based cortical thickness estimation methods. Neuroimage 57(3): 856-865. doi: 10.1016/j. neuroimage.2011.05.053 PMID: 21640841
14. Redolfi A, Bosco P, Manset D, Frisoni GB; neuGRID consortium (2013) Brain investigation and brain conceptualization. Funct Neurol 28(3): 175-190. doi: 10.11138/FNeur/2013.28.3.175 PMID: 24139654
15. Glatard T, Lartizien C, Gibaud B, da Silva RF, Forestier G, et al. (2013) A virtual imaging platform for multi-modality medical image simulation. IEEE Trans Med Imaging 32(1): 110-118. PMID: 23014715
16. Reuter M, Schmansky NJ, Rosas HD, Fischl B (2012) Within-subject template estimation for unbiased longitudinal image analysis. Neuroimage 61(4): 1402-1418. doi: 10.1016/j.neuroimage.2012.02.084 PMID: 22430496
17. Desikan RS, Segonne F, Fischl B, Quinn BT, Dickerson BC, et al. (2006) An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest. Neuroimage 31(3): 968-980. PMID: 16530430
18. Dickerson BC, Feczko E, Augustinack JC, Pacheco J, Morris JC, et al. (2009a) Differential effects of aging and alzheimer's disease on medial temporal lobe cortical thickness and surface area. Neurobiol Aging 30(3): 432-440. PMID: 17869384
19. Dickerson BC, Bakkour A, Salat DH, Feczko E, Pacheco J, et al. (2009b) The cortical signature of Alzheimer's disease: Regionally specific cortical thinning relates to symptom severity in very mild to mild AD dementia and is detectable in asymptomatic amyloid-positive individuals. Cereb Cortex 19(3): 497-510. doi: 10.1093/cercor/bhn113 PMID: 18632739
20. Liu T, Nie J, Tarokh A, Guo L, Wong ST (2008) Reconstruction of central cortical surface from brain MRI images: Method and application. Neuroimage 40(3): 991-1002. doi: 10.1016/j.neuroimage.2007.12.027 PMID: 18289879
21. Querbes O, Aubry F, Pariente J, Lotterie JA, Démonet JF, et al. (2009) Early diagnosis of Alzheimer's disease using cortical thickness: Impact of cognitive reserve. Brain 132: 2036-2047. doi: 10.1093/brain/awp105 PMID: 19439419
22. Genovese CR, Lazar NA, Nichols T (2002) Thresholding of statistical maps in functional neuroimaging using the false discovery rate. Neuroimage 15(4): 870-878. PMID: 11906227
23. Hanley JA, McNeil BJ (1983) A method of comparing the areas under receiver operating characteristic curves derived from the same cases. Radiology 148(3): 839-843. PMID: 6878708
24. Lerch JP, Evans AC (2005) Cortical thickness analysis examined through power analysis and a population simulation. Neuroimage 24(1): 163-173. PMID: 15588607
25. Jones R, Payne R (1997) Clinical Investigation and Statistics in Laboratory Medicine (Management & Technology in Laboratory Medicine). ACB Venture Publications. 188 p. ISBN-10: 0902429213. ISBN-13: 978-0902429215.
26. Brewer JB, Magda S, Airriess C, Smith ME (2009) Fully-automated quantification of regional brain volumes for improved detection of focal atrophy in Alzheimer Disease. Am J Neuroradiol 30(3): 578-580. doi: 10.3174/ajnr.A1402 PMID: 19112065
27. Lee JK, Lee JM, Kim JS, Kim IY, Evans AC, et al. (2006a) A novel quantitative cross-validation of different cortical surface reconstruction algorithms using MRI phantom. Neuroimage 31(2): 572-584.
28. Lee J, Lee JM, Kim JH, Kim IY, Evans AC, et al. (2006b) A novel quantitative validation of the cortical surface reconstruction algorithm using MRI phantom: issues on local geometric accuracy and cortical thickness. Med Image Comput Comput Assist Interv 9: 183-190. PMID: 17354889
29. Knight WD, Kim LG, Douiri A, Frost C, Rossor MN, et al. (2011) Acceleration of cortical thinning in familial Alzheimer's disease. Neurobiol Aging 32(10): 1765-1773. doi: 10.1016/j.neurobiolaging.2009.11.013 PMID: 20005601
30. Ridgway GR, Lehmann M, Barnes J, Rohrer JD, Warren JD, et al. (2012) Early-onset Alzheimer disease clinical variants: multivariate analyses of cortical thickness. Neurology 79(1): 80-84. doi: 10.1212/WNL.0b013e31825dce28 PMID: 22722624
31. Kabani N, Le Goualher G, MacDonald D, Evans AC (2001) Measurement of cortical thickness using an automated 3-D algorithm: A validation study. Neuroimage 13(2): 375-380. PMID: 11162277
32. Kuperberg GR, Broome MR, McGuire PK, David AS, Eddy M, et al. (2003) Regionally localized thinning of the cerebral cortex in schizophrenia. Arch Gen Psychiatry 60(9): 878-888. PMID: 12963669
33. Rosas HD, Liu AK, Hersch S, Glessner M, Ferrante RJ, et al. (2002) Regional and progressive thinning of the cortical ribbon in Huntington's disease. Neurology 58(5): 695-701. PMID: 11889230
34. Salat DH, Buckner RL, Snyder AZ, Greve DN, Desikan RS, et al. (2004) Thinning of the cerebral cortex in aging. Cereb Cortex 14(7): 721-730. PMID: 15054051
35. Han X, Pham DL, Tosun D, Rettmann ME, Xu C, et al. (2004) CRUISE: Cortical reconstruction using implicit surface evolution. Neuroimage 23(3): 997-1012. PMID: 15528100
36. Hazlett HC, Poe MD, Gerig G, Styner M, Chappell C, et al. (2011) Early brain overgrowth in autism associated with an increase in cortical surface area before age 2 years. Arch Gen Psychiatry 68(5): 467-476. doi: 10.1001/archgenpsychiatry.2011.39 PMID: 21536976
37. Acosta O, Fripp J, Doré V, Bourgeat P, Favreau JM, et al. (2012) Cortical surface mapping using topology correction, partial flattening and 3D shape context-based non-rigid registration for use in quantifying atrophy in Alzheimer's disease. J Neurosci Methods 205(1): 96-109. doi: 10.1016/j.jneumeth.2011.12.011 PMID: 22226742
38. Das SR, Avants BB, Grossman M, Gee JC (2009) Registration based cortical thickness measurement. Neuroimage 45: 867-879. doi: 10.1016/j.neuroimage.2008.12.016 PMID: 19150502
39. Nakamura K, Fox R, Fisher E (2011) CLADA: Cortical longitudinal atrophy detection algorithm. Neuro- Image 54(1): 278-289. doi: 10.1016/j.neuroimage.2010.07.052 PMID: 20674750
40. Wyman BT, Harvey DJ, Crawford K, Bernstein MA, Carmichael O, et al. (2013) Standardization of analysis sets for reporting results from ADNI MRI data. Alzheimers Dement 9(3):332-7. doi: 10.1016/j.jalz.2012.06.004 PMID: 23110865
41. Carrillo MC, Bain LJ, Frisoni GB, Weiner MW (2012) Worldwide Alzheimer's disease neuroimaging initiative. Alzheimers Dement 8(4): 337-342. doi: 10.1016/j.jalz.2012.04.007 PMID: 22748939
42. Westman E, Simmons A, Muehlboeck JS, Mecocci P, Vellas B, et al. (2011) AddNeuroMed and ADNI: similar patterns of Alzheimer's atrophy and automated MRI classification accuracy in Europe and North America. Neuroimage 58(3): 818-828. doi: 10.1016/j.neuroimage.2011.06.065 PMID: 21763442
43. Ardekani BA, Figarsky K, Sidtis JJ (2013) Sexual Dimorphism in the Human Corpus Callosum: An MRI Study Using the OASIS Brain Database. Cereb Cortex 23(10): 2514-2520. doi: 10.1093/cercor/bhs253 PMID: 22891036