메뉴 건너뛰기




Volumn 2, Issue 4, 2014, Pages 419-430

A uniform random graph model for directed acyclic networks and its effect on motif-finding

Author keywords

Citation networks; Complex networks; Directed acyclic graphs; Motifs; Random network models

Indexed keywords

COMPLEX NETWORKS; SWITCHING; TOPOLOGY;

EID: 84924970402     PISSN: 20511310     EISSN: 20511329     Source Type: Journal    
DOI: 10.1093/comnet/cnu028     Document Type: Article
Times cited : (8)

References (24)
  • 1
    • 70350523756 scopus 로고    scopus 로고
    • Random graph models for directed acyclic networks.
    • Karrer, B. & Newman, M. E. J. (2009) Random graph models for directed acyclic networks. Phys. Rev. E, 80, 046110.
    • (2009) Phys. Rev. E , vol.80
    • Karrer, B.1    Newman, M.E.J.2
  • 2
    • 84894171681 scopus 로고    scopus 로고
    • Motifs in directed acyclic networks
    • In 2013 International Conference on Signal- Image Technology Internet-Based Systems (SITIS), Kyoto, Japan
    • Carstens, C. J. (2013) Motifs in directed acyclic networks. In 2013 International Conference on Signal- Image Technology Internet-Based Systems (SITIS), Kyoto, Japan. IEEE, pp. 605-611.
    • (2013) IEEE , pp. 605-611
    • Carstens, C.J.1
  • 5
    • 0037012880 scopus 로고    scopus 로고
    • Specificity and stability in topology of protein networks.
    • Maslov, S. & Sneppen, K. (2002) Specificity and stability in topology of protein networks. Science, 296, 910-913.
    • (2002) Science , vol.296 , pp. 910-913
    • Maslov, S.1    Sneppen, K.2
  • 6
    • 33646191268 scopus 로고    scopus 로고
    • A faster algorithm for detecting network motifs. Algorithms in Bioinformatics
    • Berlin, Heidelberg: Springer
    • Wernicke, S. (2005) A faster algorithm for detecting network motifs. Algorithms in Bioinformatics. Lecture Notes in Computer Science, Vol. 3692. Berlin, Heidelberg: Springer, pp. 165-177.
    • (2005) Lecture Notes in Computer Science , vol.3692 , pp. 165-177
    • Wernicke, S.1
  • 7
    • 28844487926 scopus 로고    scopus 로고
    • Generating uniformly distributed random networks.
    • Artzy-Randrup, Y. & Stone, L. (2005) Generating uniformly distributed random networks. Phys. Rev. E, 72, 056708.
    • (2005) Phys. Rev. E , vol.72
    • Artzy-Randrup, Y.1    Stone, L.2
  • 8
    • 0000949858 scopus 로고    scopus 로고
    • A Markov chain Monte Carlo method for generating random (0, 1)-matrices with given marginals.
    • Rao, A. R., Jana, R. & Bandyopadhyay, S. (1996) A Markov chain Monte Carlo method for generating random (0, 1)-matrices with given marginals. Sankhya, 58, 225-242.
    • (1996) Sankhya , vol.58 , pp. 225-242
    • Rao, A.R.1    Jana, R.2    Bandyopadhyay, S.3
  • 10
    • 78650204553 scopus 로고    scopus 로고
    • Uniform sampling of digraphs with a fixed degree sequence. In Graph Theoretic Concepts in Computer Science.
    • Berlin Heidelberg: Springer
    • Berger, A. & Müller-Hannemann, M. (2010) Uniform sampling of digraphs with a fixed degree sequence. In Graph Theoretic Concepts in Computer Science. Lecture Notes in Computer Science. Berlin Heidelberg: Springer, pp. 220-231.
    • (2010) Lecture Notes in Computer Science , pp. 220-231
    • Berger, A.1    Müller-Hannemann, M.2
  • 12
    • 0000815146 scopus 로고
    • Sur l'extension de l'ordre partiel.
    • Szpilrajnm, E. (1930) Sur l'extension de l'ordre partiel. Fundam. Math., 16, 1251-1256.
    • (1930) Fundam. Math. , vol.16 , pp. 1251-1256
    • Szpilrajnm, E.1
  • 13
    • 2342477487 scopus 로고
    • Topological sorting of large networks.
    • Kahn, A. B. (1962) Topological sorting of large networks. Commun. ACM, 5, 558-562.
    • (1962) Commun. ACM , vol.5 , pp. 558-562
    • Kahn, A.B.1
  • 15
    • 0006217743 scopus 로고
    • Random walks on graphs: a survey
    • In D. Miklós, V. T. Sós, and T. Szönyi, eds, Combinatorics, Paul Erdös is Eighty
    • Lovász, L. Random walks on graphs: a survey. In D. Miklós, V. T. Sós, and T. Sz?onyi, eds, Combinatorics, Paul Erd?os is Eighty, vol. 2. János Bolyai Mathematical Society, 1993, pp 353-398.
    • (1993) János Bolyai Mathematical Society , vol.2 , pp. 353-398
    • Lovász, L.1
  • 16
    • 84863253706 scopus 로고    scopus 로고
    • Biological network motif detection: principles and practice.
    • Wong, E., Baur, B., Quader, S. & Huang, C.-H. (2012) Biological network motif detection: principles and practice. Briefings Bioinform., 13, 202-215.
    • (2012) Briefings Bioinform , vol.13 , pp. 202-215
    • Wong, E.1    Baur, B.2    Quader, S.3    Huang, C.-H.4
  • 17
    • 84960138875 scopus 로고    scopus 로고
    • Accessed 20 May 2013.
    • Kdd cup dataset. http://www.cs.cornell.edu/projects/kddcup/datasets.html, 2003. Accessed 20 May 2013.
    • (2003)
  • 20
    • 85026969952 scopus 로고    scopus 로고
    • Implementation of Karrer-Newman algorithm and ordered switching method. https://github.com/queenBNE/DirectedAcyclicNetworks, 2014.
    • (2014)
  • 21
    • 43349094507 scopus 로고    scopus 로고
    • The igraph software package for complex network research.
    • Csardi, G. & Nepusz, T. (2006) The igraph software package for complex network research. Int. J. Complex Syst., p. 1695.
    • (2006) Int. J. Complex Syst. , pp. 1695
    • Csardi, G.1    Nepusz, T.2
  • 22
    • 33846293215 scopus 로고    scopus 로고
    • Finding scientific gems with Google's pagerank algorithm.
    • Chen, P., Xie, H., Maslov, S. & Redner, S. (2007) Finding scientific gems with Google's pagerank algorithm. J. Informetrics, 1, 8-15.
    • (2007) J. Informetrics , vol.1 , pp. 8-15
    • Chen, P.1    Xie, H.2    Maslov, S.3    Redner, S.4
  • 23
    • 70349780651 scopus 로고    scopus 로고
    • Modeling scientific-citation patterns and other triangle-rich acyclic networks
    • Wu, Z.-X. & Holme, P. (2009) Modeling scientific-citation patterns and other triangle-rich acyclic networks. Phys. Rev. E, 80, 037101.
    • (2009) Phys. Rev. E , vol.80
    • Wu, Z.-X.1    Holme, P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.