Annotation of glycomics MS and MS/MS spectra using the glycoworkbench software tool

Methods in Molecular Biology

Volumn 1273, Issue , 2015, Pages 3-15

  Damerell, David ^a   Ceroni, Alessio ^a   Maass, Kai ^a   Ranzinger, René ^a   Dell, Anne ^a   Haslam, Stuart M ^a  

^a NONE

Author keywords

Bioinformatics; Glycobiology; Glycoinformatics; Glycomics; Glycoproteomics; Mass spectrometry

Indexed keywords

GLYCAN; KERATAN SULFATE; POLYSACCHARIDE;

ARTICLE; CARBOHYDRATE ANALYSIS; COMPUTER PROGRAM; FUCOSYLATION; GLYCOBIOLOGY; GLYCOWORKBENCH SOFTWARE TOOL; PRIORITY JOURNAL; TANDEM MASS SPECTROMETRY; CHEMISTRY; MOLECULAR WEIGHT; PROCEDURES;

GLYCOMICS; MOLECULAR WEIGHT; POLYSACCHARIDES; SOFTWARE; TANDEM MASS SPECTROMETRY;

EID: 84924534087     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-2343-4_1     Document Type: Article

References (6)

1. Ceroni A et al (2008) GlycoWorkbench: A tool for the computer-assisted annotation of mass spectra of glycans. J Proteome Res 7:1650–1659
2. Ceroni A, Dell A, Haslam SM (2007) The GlycanBuilder: A fast, intuitive and fl exible software tool for building and displaying glycan structures. Source Code Biol Med 2:3
3. Domon B, Costello CE (1988) A systematic nomenclature for carbohydrate fragmentations in FAB-MS/MS spectra of glycoconjugates. Glycoconj J 5:397–409
4. Tissot B et al (2008) Software tool for the structural determination of glycosaminoglycans by mass spectrometry. Anal Chem 80:9204–9212
5. Maass K et al (2007) “Glyco-peakfi nder–de novo composition analysis of glycoconjugates”. Proteomics 7:4435–4444
6. Klisch K et al (2008) A tetraantennary glycan with bisecting N-acetylglucosamine and the Sd a antigen is the predominant N-glycan on bovine pregnancy-associated glycoproteins. Glycobiology 18–1:42–62