메뉴 건너뛰기




Volumn 8, Issue 1, 2015, Pages

Extracellular Onchocerca-derived small RNAs in host nodules and blood

Author keywords

Extracellular RNA; Filarial nematode; Host pathogen; microRNAs; Onchocerciasis

Indexed keywords

HELMINTH RNA; MICRORNA; MICRORNA 100; RIBOSOME RNA; TRANSFER RNA;

EID: 84924265554     PISSN: None     EISSN: 17563305     Source Type: Journal    
DOI: 10.1186/s13071-015-0656-1     Document Type: Article
Times cited : (100)

References (44)
  • 1
    • 84861866572 scopus 로고    scopus 로고
    • The mechanics of miRNA-mediated gene silencing: A look under the hood of miRISC
    • Fabian MR, Sonenberg N. The mechanics of miRNA-mediated gene silencing: a look under the hood of miRISC. Nat Struct Mol Biol. 2012;19:586-93.
    • (2012) Nat Struct Mol Biol. , vol.19 , pp. 586-593
    • Fabian, M.R.1    Sonenberg, N.2
  • 2
    • 77955920974 scopus 로고    scopus 로고
    • microRNAs: A role in drug resistance in parasitic nematodes?
    • Devaney E, Winter AD, Britton C. microRNAs: a role in drug resistance in parasitic nematodes? Trends Parasitol. 2010;26:428-33.
    • (2010) Trends Parasitol , vol.26 , pp. 428-433
    • Devaney, E.1    Winter, A.D.2    Britton, C.3
  • 6
    • 84887895214 scopus 로고    scopus 로고
    • Deep sequencing-based identification of pathogen-specific microRNAs in the plasma of rabbits infected with Schistosoma japonicum
    • Cheng G, Luo R, Hu C, Cao J, Jin Y. Deep sequencing-based identification of pathogen-specific microRNAs in the plasma of rabbits infected with Schistosoma japonicum. Parasitology. 2013;140:1751-61.
    • (2013) Parasitology , vol.140 , pp. 1751-1761
    • Cheng, G.1    Luo, R.2    Hu, C.3    Cao, J.4    Jin, Y.5
  • 7
    • 84901833952 scopus 로고    scopus 로고
    • Surface analysis of Dicrocoelium dendriticum. The molecular characterization of exosomes reveals the presence of miRNAs
    • Bernal D, Trelis M, Montaner S, Cantalapiedra F, Galiano A, Hackenberg M, et al. Surface analysis of Dicrocoelium dendriticum. The molecular characterization of exosomes reveals the presence of miRNAs. J Proteomics. 2014;105:232-41.
    • (2014) J Proteomics. , vol.105 , pp. 232-241
    • Bernal, D.1    Trelis, M.2    Montaner, S.3    Cantalapiedra, F.4    Galiano, A.5    Hackenberg, M.6
  • 8
    • 0242720366 scopus 로고    scopus 로고
    • The ultrastructural architecture of the adult Schistosoma japonicum tegument
    • Gobert GN, Stenzel DJ, McManus DP, Jones MK. The ultrastructural architecture of the adult Schistosoma japonicum tegument. Int J Parasitol. 2003;33:1561-75.
    • (2003) Int J Parasitol. , vol.33 , pp. 1561-1575
    • Gobert, G.N.1    Stenzel, D.J.2    McManus, D.P.3    Jones, M.K.4
  • 9
    • 84921530965 scopus 로고    scopus 로고
    • Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    • Buck AH, Coakley G, Simbari F, Mcsorley H, Quintana J, Le BT, et al. Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity. Nat Commun. 2014;5:5488.
    • (2014) Nat Commun. , vol.5 , pp. 5488
    • Buck, A.H.1    Coakley, G.2    Simbari, F.3    McSorley, H.4    Quintana, J.5    Le, B.T.6
  • 11
    • 84905507693 scopus 로고    scopus 로고
    • The global burden of disease study 2010: Interpretation and implications for the neglected tropical diseases
    • Hotez PJ, Alvarado M, Basáñez M-G, Bolliger I, Bourne R, Boussinesq M, et al. The global burden of disease study 2010: interpretation and implications for the neglected tropical diseases. PLoS Negl Trop Dis. 2014;8:e2865.
    • (2014) PLoS Negl Trop Dis. , vol.8 , pp. e2865
    • Hotez, P.J.1    Alvarado, M.2    Basáñez, M.-G.3    Bolliger, I.4    Bourne, R.5    Boussinesq, M.6
  • 12
    • 33846547016 scopus 로고    scopus 로고
    • Molecular systematics of five Onchocerca species (Nematoda: Filarioidea) including the human parasite, O. Volvulus, suggest sympatric speciation
    • Morales-Hojas R, Cheke RA, Post RJ. Molecular systematics of five Onchocerca species (Nematoda: Filarioidea) including the human parasite, O. volvulus, suggest sympatric speciation. J Helminthol. 2006;80:281-90.
    • (2006) J Helminthol. , vol.80 , pp. 281-290
    • Morales-Hojas, R.1    Cheke, R.A.2    Post, R.J.3
  • 13
    • 84862317625 scopus 로고    scopus 로고
    • The onchocerciasis chronicle: From the beginning to the end?
    • Crump A, Morel CM, Omura S. The onchocerciasis chronicle: from the beginning to the end? Trends Parasitol. 2012;28:280-8.
    • (2012) Trends Parasitol , vol.28 , pp. 280-288
    • Crump, A.1    Morel, C.M.2    Omura, S.3
  • 14
    • 33750627343 scopus 로고    scopus 로고
    • Eosinophils contribute to killing of adult Onchocerca ochengi within onchocercomata following elimination of Wolbachia
    • Nfon CK, Makepeace BL, Njongmeta LM, Tanya VN, Bain O, Trees AJ. Eosinophils contribute to killing of adult Onchocerca ochengi within onchocercomata following elimination of Wolbachia. Microbes Infect. 2006;8:2698-705.
    • (2006) Microbes Infect. , vol.8 , pp. 2698-2705
    • Nfon, C.K.1    Makepeace, B.L.2    Njongmeta, L.M.3    Tanya, V.N.4    Bain, O.5    Trees, A.J.6
  • 15
    • 0031950099 scopus 로고    scopus 로고
    • Onchocerca ochengi: Epidemiological evidence of cross-protection against Onchocerca volvulus in man
    • Wahl G, Enyong P, Ngosso A, Schibel JM, Moyou R, Tubbesing H, et al. Onchocerca ochengi: epidemiological evidence of cross-protection against Onchocerca volvulus in man. Parasitology. 1998;116(Pt 4):349-62.
    • (1998) Parasitology , vol.116 , pp. 349-362
    • Wahl, G.1    Enyong, P.2    Ngosso, A.3    Schibel, J.M.4    Moyou, R.5    Tubbesing, H.6
  • 16
    • 34250196496 scopus 로고    scopus 로고
    • Prevalence and intensity of Onchocerca volvulus infection and efficacy of ivermectin in endemic communities in Ghana: A two-phase epidemiological study
    • Osei-Atweneboana MY, Eng JKL, Boakye DA, Gyapong JO, Prichard RK. Prevalence and intensity of Onchocerca volvulus infection and efficacy of ivermectin in endemic communities in Ghana: a two-phase epidemiological study. Lancet. 2007;369:2021-9.
    • (2007) Lancet , vol.369 , pp. 2021-2029
    • Osei-Atweneboana, M.Y.1    Eng, J.K.L.2    Boakye, D.A.3    Gyapong, J.O.4    Prichard, R.K.5
  • 17
    • 0030981519 scopus 로고    scopus 로고
    • Serious reactions after mass treatment of onchocerciasis with ivermectin in an area endemic for Loa loa infection
    • Gardon J, Gardon-Wendel N, Demanga-Ngangue, Kamgno J, Chippaux JP, Boussinesq M: Serious reactions after mass treatment of onchocerciasis with ivermectin in an area endemic for Loa loa infection. Lancet. 1997;350:18-22.
    • (1997) Lancet , vol.350 , pp. 18-22
    • Gardon, J.1    Gardon-Wendel, N.2    Demanga-Ngangue3    Kamgno, J.4    Chippaux, J.P.5    Boussinesq, M.6
  • 18
    • 0036968301 scopus 로고    scopus 로고
    • Detection of Onchocerca volvulus infection in low prevalence areas: A comparison of three diagnostic methods
    • Boatin BA, Toé L, Alley ES, Nagelkerke NJD, Borsboom G, Habbema JDF. Detection of Onchocerca volvulus infection in low prevalence areas: a comparison of three diagnostic methods. Parasitology. 2002;125(Pt 6):545-52.
    • (2002) Parasitology , vol.125 , pp. 545-552
    • Boatin, B.A.1    Toé, L.2    Alley, E.S.3    Nagelkerke, N.J.D.4    Borsboom, G.5    Habbema, J.D.F.6
  • 19
    • 48449085104 scopus 로고    scopus 로고
    • Major sperm protein as a diagnostic antigen for onchocerciasis
    • Park J, Dickerson TJ, Janda KD. Major sperm protein as a diagnostic antigen for onchocerciasis. Bioorg Med Chem. 2008;16:7206-9.
    • (2008) Bioorg Med Chem. , vol.16 , pp. 7206-7209
    • Park, J.1    Dickerson, T.J.2    Janda, K.D.3
  • 20
    • 0033681551 scopus 로고    scopus 로고
    • A rapid-format antibody card test for diagnosis of onchocerciasis
    • Weil GJ, Steel C, Liftis F, Li B, Mearns G, Lobos E, et al. A rapid-format antibody card test for diagnosis of onchocerciasis. J Infect Dis. 2000;186:1796-9.
    • (2000) J Infect Dis. , vol.186 , pp. 1796-1799
    • Weil, G.J.1    Steel, C.2    Liftis, F.3    Li, B.4    Mearns, G.5    Lobos, E.6
  • 21
    • 79952647924 scopus 로고    scopus 로고
    • High throughput multiplex PCR and probe-based detection with luminex beads for seven intestinal parasites
    • Taniuchi M, Verweij JJ, Noor Z, Sobuz SU, Van Lieshout L, Petri Jr WA, et al. High throughput multiplex PCR and probe-based detection with luminex beads for seven intestinal parasites. Am J Trop Med Hyg. 2011;84:332-7.
    • (2011) Am J Trop Med Hyg. , vol.84 , pp. 332-337
    • Taniuchi, M.1    Verweij, J.J.2    Noor, Z.3    Sobuz, S.U.4    Van Lieshout, L.5    Petri, W.A.6
  • 22
    • 79955766597 scopus 로고    scopus 로고
    • Diagnosis of Indian visceral leishmaniasis by nucleic acid detection using PCR
    • Srivastava P, Mehrotra S, Tiwary P, Chakravarty J, Sundar S. Diagnosis of Indian visceral leishmaniasis by nucleic acid detection using PCR. PLoS One. 2011;6:4-8.
    • (2011) PLoS One , vol.6 , pp. 4-8
    • Srivastava, P.1    Mehrotra, S.2    Tiwary, P.3    Chakravarty, J.4    Sundar, S.5
  • 23
    • 84864382291 scopus 로고    scopus 로고
    • Extracellular small RNAs: What, where, why?
    • Hoy AM, Buck AH. Extracellular small RNAs: what, where, why? Biochem Soc Trans. 2012;40:886-90.
    • (2012) Biochem Soc Trans. , vol.40 , pp. 886-890
    • Hoy, A.M.1    Buck, A.H.2
  • 25
    • 84895773706 scopus 로고    scopus 로고
    • Immunoepidemiological profiling of onchocerciasis patients reveals associations with microfilaria loads and ivermectin intake on both individual and community levels
    • Arndts K, Specht S, Debrah AY, Tamarozzi F, Klarmann Schulz U, Mand S, et al. Immunoepidemiological profiling of onchocerciasis patients reveals associations with microfilaria loads and ivermectin intake on both individual and community levels. PLoS Negl Trop Dis. 2014;8:e2679.
    • (2014) PLoS Negl Trop Dis. , vol.8 , pp. e2679
    • Arndts, K.1    Specht, S.2    Debrah, A.Y.3    Tamarozzi, F.4    Schulz, U.K.5    Mand, S.6
  • 26
    • 84876581756 scopus 로고    scopus 로고
    • Identification of extracellular miRNA in human cerebrospinal fluid by next-generation sequencing
    • Burgos KL, Javaherian A, Bomprezzi R, Ghaffari L, Rhodes S, Courtright A, et al. Identification of extracellular miRNA in human cerebrospinal fluid by next-generation sequencing. RNA. 2013;19:712-22.
    • (2013) RNA. , vol.19 , pp. 712-722
    • Burgos, K.L.1    Javaherian, A.2    Bomprezzi, R.3    Ghaffari, L.4    Rhodes, S.5    Courtright, A.6
  • 27
    • 80255127234 scopus 로고    scopus 로고
    • Cutadapt removes adapter sequences from high-throughput sequencing reads
    • Martin M. Cutadapt removes adapter sequences from high-throughput sequencing reads. Bioinformatics Act. 2011;17:10-2.
    • (2011) Bioinformatics Act. , vol.17 , pp. 10-12
    • Martin, M.1
  • 28
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead B, Trapnell C, Pop M, Salzberg SL. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 2009;10:R25.
    • (2009) Genome Biol. , vol.10 , pp. R25
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 29
    • 0037252684 scopus 로고    scopus 로고
    • Rfam: An RNA family database
    • Griffiths-Jones S. Rfam: an RNA family database. Nucleic Acids Res. 2003;31:439-41.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 439-441
    • Griffiths-Jones, S.1
  • 30
    • 84855293838 scopus 로고    scopus 로고
    • miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
    • Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N. miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades. Nucleic Acids Res. 2012;40:37-52.
    • (2012) Nucleic Acids Res. , vol.40 , pp. 37-52
    • Friedlander, M.R.1    Mackowiak, S.D.2    Li, N.3    Chen, W.4    Rajewsky, N.5
  • 31
    • 84891818318 scopus 로고    scopus 로고
    • miRBase: Annotating high confidence microRNAs using deep sequencing data
    • Database issue
    • Kozomara A, Griffiths-Jones S. miRBase: annotating high confidence microRNAs using deep sequencing data. Nucleic Acids Res. 2014;42(Database issue):D68-73.
    • (2014) Nucleic Acids Res. , vol.42 , pp. D68-D73
    • Kozomara, A.1    Griffiths-Jones, S.2
  • 34
    • 84877839958 scopus 로고    scopus 로고
    • 5' tRNA halves are present as abundant complexes in serum, concentrated in blood cells, and modulated by aging and calorie restriction
    • Dhahbi JM, Spindler SR, Atamna H, Yamakawa A, Boffelli D, Mote P, et al. 5' tRNA halves are present as abundant complexes in serum, concentrated in blood cells, and modulated by aging and calorie restriction. BMC Genomics. 2013;14:298.
    • (2013) BMC Genomics. , vol.14 , pp. 298
    • Dhahbi, J.M.1    Spindler, S.R.2    Atamna, H.3    Yamakawa, A.4    Boffelli, D.5    Mote, P.6
  • 35
    • 0022355935 scopus 로고
    • The onchocercal nodule: Interrelationship of adult worms and blood vessels
    • George GH, Palmieri JR, Connor DH. The onchocercal nodule: interrelationship of adult worms and blood vessels. Am J Trop Med Hyg. 1985;34:1144-8.
    • (1985) Am J Trop Med Hyg. , vol.34 , pp. 1144-1148
    • George, G.H.1    Palmieri, J.R.2    Connor, D.H.3
  • 36
    • 84904528181 scopus 로고    scopus 로고
    • The geographic distribution of onchocerciasis in the 20 participating countries of the African Programme for Onchocerciasis Control: (2) pre-control endemicity levels and estimated number infected
    • Zoure HGM, Noma M, Tekle AH, Amazigo UV, Diggle PJ, Giorgi E, et al. The geographic distribution of onchocerciasis in the 20 participating countries of the African Programme for Onchocerciasis Control: (2) pre-control endemicity levels and estimated number infected. Parasit Vectors. 2014;7:326.
    • (2014) Parasit Vectors. , vol.7 , pp. 326
    • Zoure, H.G.M.1    Noma, M.2    Tekle, A.H.3    Amazigo, U.V.4    Diggle, P.J.5    Giorgi, E.6
  • 37
    • 84884696199 scopus 로고    scopus 로고
    • The cost of annual versus biannual community-directed treatment of onchocerciasis with ivermectin: Ghana as a case study
    • Turner HC, Osei-Atweneboana MY, Walker M, Tettevi EJ, Churcher TS, Asiedu O, et al. The cost of annual versus biannual community-directed treatment of onchocerciasis with ivermectin: Ghana as a case study. PLoS Negl Trop Dis. 2013;7:e2452.
    • (2013) PLoS Negl Trop Dis. , vol.7 , pp. e2452
    • Turner, H.C.1    Osei-Atweneboana, M.Y.2    Walker, M.3    Tettevi, E.J.4    Churcher, T.S.5    Asiedu, O.6
  • 38
    • 84870930338 scopus 로고    scopus 로고
    • The complex exogenous RNA spectra in human plasma: An interface with human gut biota?
    • Wang K, Li H, Yuan Y, Etheridge A, Zhou Y, Huang D, et al. The complex exogenous RNA spectra in human plasma: an interface with human gut biota? PLoS One. 2012;7:e51009.
    • (2012) PLoS One , vol.7 , pp. e51009
    • Wang, K.1    Li, H.2    Yuan, Y.3    Etheridge, A.4    Zhou, Y.5    Huang, D.6
  • 39
    • 84964314461 scopus 로고    scopus 로고
    • Small RNAs from plants, bacteria and fungi within the order Hypocreales are ubiquitous in human plasma
    • Beatty M, Guduric-fuchs J, Brown E, Bridgett S, Chakravarthy U, Hogg RE, et al. Small RNAs from plants, bacteria and fungi within the order Hypocreales are ubiquitous in human plasma. BMC Genomics. 2014;15:933.
    • (2014) BMC Genomics. , vol.15 , pp. 933
    • Beatty, M.1    Guduric-fuchs, J.2    Brown, E.3    Bridgett, S.4    Chakravarthy, U.5    Hogg, R.E.6
  • 40
    • 34250877841 scopus 로고    scopus 로고
    • A mammlian microRNA expression atlas based on small RNA library sequencing
    • Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, et al. A mammlian microRNA expression atlas based on small RNA library sequencing. Cell. 2007;129:1401-14.
    • (2007) Cell , vol.129 , pp. 1401-1414
    • Landgraf, P.1    Rusu, M.2    Sheridan, R.3    Sewer, A.4    Iovino, N.5    Aravin, A.6
  • 42
    • 77956179557 scopus 로고    scopus 로고
    • The conserved miR-51 microRNA family is redundantly required for embryonic development and pharynx attachment in Caenorhabditis elegans
    • Shaw WR, Armisen J, Lehrbach NJ, Miska EA. The conserved miR-51 microRNA family is redundantly required for embryonic development and pharynx attachment in Caenorhabditis elegans. Genetics. 2010;185:897-905.
    • (2010) Genetics , vol.185 , pp. 897-905
    • Shaw, W.R.1    Armisen, J.2    Lehrbach, N.J.3    Miska, E.A.4
  • 43
    • 84861217402 scopus 로고    scopus 로고
    • The mir-51 family of microRNAs functions in diverse regulatory pathways in Caenorhabditis elegans
    • Brenner JL, Kemp BJ, Abbott AL. The mir-51 family of microRNAs functions in diverse regulatory pathways in Caenorhabditis elegans. PLoS One. 2012;7:e37185.
    • (2012) PLoS One , vol.7 , pp. e37185
    • Brenner, J.L.1    Kemp, B.J.2    Abbott, A.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.