Correction: Ecosystem functions across trophic levels are linked to functional and phylogenetic diversity (PLoS One (2015) 10:2 (e0117595) DOI: 10.1371/journal.pone.0117595);Ecosystem functions across trophic levels are linked to functional and phylogenetic diversity

PLoS ONE

Volumn 10, Issue 2, 2015, Pages

  Thompson, Patrick L ^a   Davies, T Jonathan ^a   Gonzalez, Andrew ^a  

^a MCGILL UNIVERSITY   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIODIVERSITY; BIOMASS; CONTROLLED STUDY; ECOSYSTEM; ENVIRONMENTAL FACTOR; FUNCTIONAL DIVERSITY; GENETIC TRAIT; GENETIC VARIABILITY; NONHUMAN; ORGANISM COMMUNITY; PHYLOGENY; PHYTOPLANKTON; POND; POPULATION ABUNDANCE; PREDICTION; SPECIES DIVERSITY; SPECIES RICHNESS; TROPHIC LEVEL; ZOOPLANKTON; ANIMAL; CLASSIFICATION; FOOD CHAIN; STATISTICAL MODEL;

ANIMALS; BIODIVERSITY; BIOMASS; FOOD CHAIN; MODELS, STATISTICAL; PHYLOGENY; PHYTOPLANKTON; ZOOPLANKTON;

EID: 84923274278     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0220213     Document Type: Erratum

References (58)

1. Hooper DU, Chapin FS, Ewel JJ, Hector A, Inchausti P, et al. (2005) Effects of biodiversity on ecosystem functioning: a consensus of current knowledge. Ecol Monogr 75:3-35. doi: 10.1890/04-0922
2. Cardinale BJ, Matulich KL, Hooper DU, Byrnes JE, Duffy E, et al. (2011) The functional role of producer diversity in ecosystems. Am J Bot 98:572-592. doi: 10.3732/ajb.1000364 PMID: 21613148
3. Cardinale BJ, Srivastava DS, Duffy JE, Wright JP, Downing AL, et al. (2006) Effects of biodiversity on the functioning of trophic groups and ecosystems. Nature 443:989-992. doi: 10.1038/nature05202 PMID: 17066035
4. Reiss J, Bridle JR, Montoya JM, Woodward G (2009) Emerging horizons in biodiversity and ecosystem functioning research. Trends Ecol Evol 24:505-514. doi: 10.1016/j.tree.2009.03.018 PMID: 19595476
5. Cadotte MW, Carscadden K, Mirotchnick N (2011) Beyond species: functional diversity and the maintenance of ecological processes and services. J Appl Ecol 48:1079-1087. doi: 10.1111/j.1365-2664. 2011.02048.x
6. Naeem S, Duffy JE, Zavaleta E (2012) The functions of biological diversity in an age of extinction. Science 336:1401-1406. doi: 10.1126/science.1215855 PMID: 22700920
7. Petchey OL, Gaston KJ (2006) Functional diversity: back to basics and looking forward. Ecol Lett 9:741-758. doi: 10.1111/j.1461-0248.2006.00924.x PMID: 16706917
8. Petchey OL, Hector A, Gaston KJ (2004) How Do Different Measures of Functional Diversity Perform? Ecology 85:847-857. doi: 10.1890/03-0226
9. Flynn DFB, Mirotchnick N, Jain M, Palmer MI, Naeem S (2011) Functional and phylogenetic diversity as predictors of biodiversity-ecosystem-function relationships. Ecology 92:1573-1581. doi: 10.1890/10-1245.1 PMID: 21905424
10. Srivastava DS, Cadotte MW, MacDonald AAM, Marushia RG, Mirotchnick N (2012) Phylogenetic diversity and the functioning of ecosystems. Ecol Lett 15:637-648. doi: 10.1111/j.1461-0248.2012.01795.x PMID: 22583836
11. Cadotte MW, Cavender-Bares J, Tilman D, Oakley TH (2009) Using Phylogenetic, Functional and Trait Diversity to Understand Patterns of Plant Community Productivity. PLoS ONE 4:e5695. doi: 10.1371/journal.pone.0005695 PMID: 19479086
12. Clark CM, Flynn DFB, Butterfield BJ, Reich PB (2012) Testing the Link between Functional Diversity and Ecosystem Functioning in a Minnesota Grassland Experiment. PLoS ONE 7:e52821. doi: 10. 1371/journal.pone.0052821 PMID: 23300787
13. Ye L, Chang C-Y, García-Comas C, Gong G-C, Hsieh C-H (2013) Increasing zooplankton size diversity enhances the strength of top-down control on phytoplankton through diet niche partitioning. J Anim Ecol 82:1052-1061. doi: 10.1111/1365-2656.12067 PMID: 23506226
14. Best RJ, Caulk NC, Stachowicz JJ (2012) Trait vs. phylogenetic diversity as predictors of competition and community composition in herbivorous marine amphipods. Ecol Lett 16:72-80. doi: 10.1111/ele. 12016 PMID: 23066869
15. Leduc D, Rowden AA, Pilditch CA, Maas EW, Probert PK (2013) Is there a link between deep-sea biodiversity and ecosystem function? Mar. Ecol Prog Ser 34:334-344. doi: 10.1111/maec.12019
16. Griffin JN, Byrnes J, Cardinale BJ (2013) Effects of predator richness on prey suppression: a metaanalysis. Ecology 94:2180-2187. doi: 10.1890/13-0179.1 PMID: 24358704
17. Dinnage R, Cadotte MW, Haddad NM, Crutsinger GM, Tilman D (2012) Diversity of plant evolutionary lineages promotes arthropod diversity. Ecol Lett 15:1308-1317. doi: 10.1111/j.1461-0248.2012. 01854.x PMID: 22913753
18. Duffy JE, Cardinale BJ, France KE, McIntyre PB, Thébault E, et al. (2007) The functional role of biodiversity in ecosystems: incorporating trophic complexity. Ecol Lett 10:522-538. doi: 10.1111/j.1461-0248.2007.01037.x PMID: 17498151
19. McQueen DJ, Post JR, Mills EL (1986) Trophic relationships in freshwater pelagic ecosystems. Can J Fish Aquat Sci 43:1571-1581.
20. Cardinale BJ, Bennett DM, Nelson CE, Gross K (2009) Does productivity drive diversity or vice versa? A test of the multivariate productivity-diversity hypothesis in streams. Ecology 90:1227-1241. PMID: 19537544
21. Haney JF (2010) An-image-based Key to the Zooplankton of the Northeast, USA. version 5.0 released 2013. University of New Hampshire Center for Freshwater Biology
22. McCauley E (1984) The estimation of the abundance and biomass of zooplankton in samples. In: Downing J, Rigler FH, editors. A Manual on Methods for the Assessment of Secondary Productivity in Fresh Waters. Oxford, UK: Blackwell Scientific. pp. 228-265.
23. Wetzel RG, Likens GE (1979) Limnological Analyses. New York, NY: Springer. PMID: 11652410
24. Oksanen J, Blanchet FG, Kindt R, Legendre P, Minchin PR, et al. (2011) vegan: Community Ecology Package. R package version 2.0-10. Available: http://CRAN. R-project.org/package=vegan.
25. R Development Core Team (2014) R: A language and environment for statistical computing. Version 3.0.2. Available: http://www.R-project.org/.
26. Petchey OL, O'Gorman E, Flynn DFB (2009) A functional guide to functional diversity measures. In: Naeem S, Bunker D, Hector A, Loreau M, Perrings C, editors. Biodiversity, Ecosystem Functioning, and Human Wellbeing. Oxford: Oxford University Press. doi: 10.1093/acprof:oso/9780199547951.003.0004
27. Cadotte MW, Jonathan Davies T, Regetz J, Kembel SW, Cleland E, et al. (2010) Phylogenetic diversity metrics for ecological communities: integrating species richness, abundance and evolutionary history. Ecol Lett 13:96-105. doi: 10.1111/j.1461-0248.2009.01405.x PMID: 19903196
28. Villeger S, Mason NW, Mouillot D (2008) New multidimensional functional diversity indices for a multifaceted framework in functional ecology. Ecology 89:2290-2301. doi: 10.1890/07-1206.1 PMID: 18724739
29. Barnett AJ, Finlay K, Beisner BE (2007) Functional diversity of crustacean zooplankton communities: towards a trait-based classification. Freshwater Biol 52:796-813. doi: 10.1111/j.1365-2427.2007. 01733.x
30. Laliberté E, Legendre P, Shipley B (2014) FD: measuring functional diversity from multiple traits, and other tools for functional ecology. R package version. 1.0-12.
31. Faith DP (1992) Conservation evaluation and phylogenetic diversity. Biol Conserv 61:1-10. doi: 10. 1016/0006-3207 (92) 91201-3
32. Webb CO, Ackerly DD, McPeek MA, Donoghue MJ (2002) Phylogenies and Community Ecology. Annu Rev Ecol Syst 33:475-505. doi: 10.1146/annurev. ecolsys.33.010802.150448
33. Kembel SW, Cowan PD, Helmus MR, Cornwell WK, Morlon H, et al. (2010) Picante: R tools for integrating phylogenies and ecology. Bioinformatics 26:1463-1464. doi: 10.1093/bioinformatics/btq166 PMID: 20395285
34. Helmus MR, Keller WB, Paterson MJ, Yan ND, Cannon CH, et al. (2010) Communities contain closely related species during ecosystem disturbance. Ecol Lett 13:162-174. doi: 10.1111/j.1461-0248.2009. 01411.x PMID: 20015255
35. Huys R, Boxshall GA (1991) Copepod Evolution. London: The Ray Society.
36. Legendre P (2013) lmodel2: Model II Regression. R package version 1.7-2. Available: http://CRAN. Rproject.org/package=lmodel2.
37. Pavoine S, Gasc A, Bonsall MB, Mason NWH (2013) Correlations between phylogenetic and functional diversity: mathematical artefacts or true ecological and evolutionary processes? J Veg Sci 24:781-793. doi: 10.1111/jvs.12051
38. Fritz SA, Purvis A (2010) Selectivity in mammalian extinction risk and threat types: a new measure of phylogenetic signal strength in binary traits. Conserv Biol 24:1042-1051. doi: 10.1111/j.1523-1739. 2010.01455.x PMID: 20184650
39. Orme D, Freckleton R, Thomas G, Petzoldt T, Fritz SA, et al. (2013) caper: Comparative Analyses of Phylogenetics and Evolution in R. R package version 0.5.2. Available: http://CRAN. R-project.org/package=caper.
40. Pagel M (1999) Inferring the historical patterns of biological evolution. Nature 401:877-884. PMID: 10553904
41. Harmon LJ, Weir JT, Brock CD, Glor RE, Challenger W (2008) GEIGER: investigating evolutionary radiations. Bioinformatics 24:129-131. PMID: 18006550
42. Grace JB (2006) Structural Equation Modeling and Natural Systems. Cambridge: Cambridge University Press.
43. Lumley T, Miller A (2009) leaps: regression subset selection. R package 2.9. Available: http://CRAN. Rproject.org/package=leaps
44. Brandl Z (1998) Feeding strategies of planktonic cyclopoids in lacustrine ecosystems. J Marine Syst 15:87-95. PMID: 9523213
45. Cadotte MW (2013) Experimental evidence that evolutionarily diverse assemblages result in higher productivity. P Natl Acad Sci USA 110:8996-9000. doi: 10.1073/pnas.1301685110 PMID: 23674676
46. Carlson RE (1977) A trophic state index for lakes. Limnol Oceanogr 22:361-369.
47. Gamfeldt L, Hillebrand H, Jonsson PR (2005) Species richness changes across two trophic levels simultaneously affect prey and consumer biomass. Ecol Lett 8:696-703. doi: 10.1111/j.1461-0248. 2005.00765.x
48. Petchey OL, McPhearson PT, Casey TM, Morin PJ (1999) Environmental warming alters food-web structure and ecosystem function. Nature 402:69-72. doi: 10.1038/47023
49. Burkepile DE, Hay ME (2008) Herbivore species richness and feeding complementarity affect community structure and function on a coral reef. P Natl Acad Sci USA 105:16201-16206. doi: 10.1073/pnas. 0801946105 PMID: 18845686
50. Schmitz OJ (2009) Effects of predator functional diversity on grassland ecosystem function. Ecology 90:2339-2345. doi: 10.1890/08-1919.1 PMID: 19769111
51. Mittelbach GG, Steiner CF, Scheiner SM, Gross KL, Reynolds HL, et al. (2001) What is the observed relationship between species richness and productivity? Ecology 82:2381-2396.
52. Freckleton RP, Harvey PH, Pagel M (2002) Phylogenetic Analysis and Comparative Data: A Test and Review of Evidence. Am Nat 160:712-726. doi: 10.1086/343873 PMID: 18707460
53. Loreau M, Hector A (2001) Partitioning selection and complementarity in biodiversity experiments. Nature 412:72-76. doi: 10.1038/35083573 PMID: 11452308
54. Jeppesen E, Jensen JP, Spndergaard M, Torben Lauridsen LJPLJ (1997) Top-down control in freshwater lakes: the role of nutrient state, submerged macrophytes and water depth. Hydrobiologia 342/343:151-164.
55. Zavaleta ES, Pasari JR, Hulvey KB, Tilman GD (2010) Sustaining multiple ecosystem functions in grassland communities requires higher biodiversity. P Natl Acad Sci USA 107:1443-1446. doi: 10. 1073/pnas.0906829107 PMID: 20080690
56. Mouillot D, Bellwood DR, Baraloto C, Chave J, Galzin R, et al. (2013) Rare Species Support Vulnerable Functions in High-Diversity Ecosystems. PLoS Biol 11:e1001569. doi: 10.1371/journal.pbio.1001569 PMID: 23723735
57. Schindler DW (1977) Evolution of Phosphorus Limitation in Lakes. Science 195:260-262. doi: 10. 1126/science.195.4275.260 PMID: 17787798
58. Elser JJ, Marzolf ER, Goldrnan CR (1990) Phosphorous and Nitrogen Limitation of Phytoplankton Growth in the Freshwaters of North America: A Review and Critique of Experimental Enrichments. Can J Fish Aquat Sci 47:1468-1477.