'Human bocavirus in Pakistani children with gastroenteritis'

Journal of Medical Virology

Volumn 87, Issue 4, 2015, Pages 656-663

  Alam, Muhammad Masroor ^a,b   Khurshid, Adnan ^a   Shaukat, Shahzad ^a   Sharif, Salmaan ^a   Suleman, Rana Muhammad ^a   Angez, Mehar ^a   Nisar, Nadia ^a   Aamir, Uzma Bashir ^a   Naeem, Muhammad ^b   Zaidi, Syed Sohail Zahoor ^a  

^a NATIONAL INSTITUTE OF HEALTH   (Pakistan)

^b QUAID I AZAM UNIVERSITY   (Pakistan)

Author keywords

Bocavirus; Diarrhea; Epidemiology; Gastroenteritis; Pakistan

Indexed keywords

ACUTE DIARRHEA; ACUTE GASTROENTERITIS; ARTICLE; CHILD; CLINICAL STUDY; DEMOGRAPHY; DIARRHEA; ENZYME LINKED IMMUNOSORBENT ASSAY; FECES ANALYSIS; FEMALE; GASTROINTESTINAL SYMPTOM; GENETIC VARIABILITY; GENOTYPE; HUMAN; HUMAN BOCAVIRUS; INFANT; MAJOR CLINICAL STUDY; MALE; MIXED INFECTION; PAKISTANI; PHYLOGENY; PRESCHOOL CHILD; PREVALENCE; QUESTIONNAIRE; REAL TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; ROTAVIRUS; ROTAVIRUS INFECTION; VIRUS DETECTION; VIRUS STRAIN; VOMITING; AGE DISTRIBUTION; CLASSIFICATION; COINFECTION; DNA SEQUENCE; FECES; GASTROENTERITIS; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR EPIDEMIOLOGY; PARVOVIRIDAE INFECTIONS; SEQUENCE HOMOLOGY; SEX RATIO; VIROLOGY;

BOCAVIRUS; HUMAN BOCAVIRUS; ROTAVIRUS;

AGE DISTRIBUTION; CHILD, PRESCHOOL; COINFECTION; DIARRHEA; ENZYME-LINKED IMMUNOSORBENT ASSAY; FECES; FEMALE; GASTROENTERITIS; GENETIC VARIATION; GENOTYPE; HUMAN BOCAVIRUS; HUMANS; INFANT; MALE; MOLECULAR EPIDEMIOLOGY; PARVOVIRIDAE INFECTIONS; PHYLOGENY; PREVALENCE; REAL-TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; ROTAVIRUS; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY; SEX DISTRIBUTION;

EID: 84922852865     PISSN: 01466615     EISSN: 10969071     Source Type: Journal    
DOI: 10.1002/jmv.24090     Document Type: Article

References (63)

1. Al-Rousan HO, Meqdam MM, Alkhateeb A, Al-Shorman A, Qaisy LM, Al-Moqbel MS. 2011. Human bocavirus in Jordan: Prevalence and clinical symptoms in hospitalised paediatric patients and molecular virus characterisation. Singapore Med J 52:365-369.
2. Alam MM, Khurshid A, Shaukat S, Suleman RM, Sharif S, Angez M, Malik SA, Ahmed TM, Aamir UB, Naeem M, Zaidi SS. 2013. Epidemiology and genetic diversity of rotavirus strains in children with acute gastroenteritis in Lahore, Pakistan. PloS ONE 8:e67998.
3. Albuquerque MC, Rocha LN, Benati FJ, Soares CC, Maranhao AG, Ramirez ML, Erdman D, Santos N. 2007. Human bocavirus infection in children with gastroenteritis, Brazil. Emerg Infect Dis 13:1756-1758.
4. Allander T, Jartti T, Gupta S, Niesters HG, Lehtinen P, Osterback R, Vuorinen T, Waris M, Bjerkner A, Tiveljung- Lindell A, van den Hoogen BG, Hyypia T, Ruuskanen O. 2007. Human bocavirus and acute wheezing in children. Clin Infect Dis 44:904-910.
5. Allander T, Tammi MT, Eriksson M, Bjerkner A, Tiveljung-Lindell A, Andersson B. 2005. Cloning of a human parvovirus by molecular screening of respiratory tract samples. Proc Natl Acad Sci USA 102:12891-12896.
6. Arden KE, McErlean P, Nissen MD, Sloots TP, Mackay IM. 2006. Frequent detection of human rhinoviruses, paramyxoviruses, coronaviruses, and bocavirus during acute respiratory tract infections. J Med Virol 78:1232-1240.
7. Arnold JC, Singh KK, Spector SA, Sawyer MH. 2006. Human bocavirus: Prevalence and clinical spectrum at a children's hospital. Clin Infect Dis 43:283-288.
8. Arthur JL, Higgins GD, Davidson GP, Givney RC, Ratcliff RM. 2009. A novel bocavirus associated with acute gastroenteritis in Australian children. PLoS Pathog 5:e1000391.
9. Bastien N, Brandt K, Dust K, Ward D, Li Y. 2006. Human Bocavirus infection, Canada. Emerg Infect Dis 12:848-850.
10. Berns KI. 1996. Parvoviridae: The viruses and their replication. In: Fields BN, Knipe DM, Howley PM, editors. Fields virology. Philadelphia, PA: Lippincott-Raven, pp 2173-2198.
11. Bhutta ZA, Das JK, Walker N, Rizvi A, Campbell H, Rudan I, Black RE, Lancet D, Pneumonia Interventions, Study G. 2013. Interventions to address deaths from childhood pneumonia and diarrhoea equitably: What works and at what cost. Lancet 381:1417-1429.
12. Blinkova O, Rosario K, Li L, Kapoor A, Slikas B, Bernardin F, Breitbart M, Delwart E. 2009. Frequent detection of highly diverse variants of cardiovirus, cosavirus, bocavirus, and circovirus in sewage samples collected in the United States. J Clin Microbiol 47:3507-3513.
13. Campe H, Hartberger C, Sing A. 2008. Role of human bocavirus infections in outbreaks of gastroenteritis. J Clin Virol 43:340-342.
14. Catalano-Pons C, Giraud C, Rozenberg F, Meritet JF, Lebon P, Gendrel D. 2007. Detection of human bocavirus in children with Kawasaki disease. Clin Microbiol Infect 13:1220-1222.
15. Cheng W, Chen J, Xu Z, Yu J, Huang C, Jin M, Li H, Zhang M, Jin Y, Duan ZJ. 2011. Phylogenetic and recombination analysis of human bocavirus 2. BMC Infect Dis 11:50.
16. Cheng WX, Jin Y, Duan ZJ, Xu ZQ, Qi HM, Zhang Q, Yu JM, Zhu L, Jin M, Liu N, Cui SX, Li HY, Fang ZY. 2008. Human bocavirus in children hospitalized for acute gastroenteritis: A case-control study. Clin Infect Dis 47:161-167.
17. Chhabra P, Payne DC, Szilagyi PG, Edwards KM, Staat MA, Shirley SH, Wikswo M, Nix WA, Lu X, Parashar UD, Vinje J. 2013. Etiology of viral gastroenteritis in children 5 years of age in the United States, 2008-2009. J Infect Dis 208:790-800.
18. Chieochansin T, Thongmee C, Vimolket L, Theamboonlers A, Poovorawan Y. 2008. Human bocavirus infection in children with acute gastroenteritis and healthy controls. Jpn J Infect Dis 61:479-481.
19. Choi EH, Lee HJ, Kim SJ, Eun BW, Kim NH, Lee JA, Lee JH, Song EK, Kim SH, Park JY, Sung JY. 2006. The association of newly identified respiratory viruses with lower respiratory tract infections in Korean children, 2000-2005. Clin Infect Dis 43:585-592.
20. Chow BD, Esper FP. 2009. The human bocaviruses: A review and discussion of their role in infection. Clin Lab Med 29:695-713.
21. Chung JY, Han TH, Kim CK, Kim SW. 2006. Bocavirus infection in hospitalized children, South Korea. Emerg Infect Dis 12:1254-1256.
22. Foulongne V, Olejnik Y, Perez V, Elaerts S, Rodiere M, Segondy M. 2006. Human bocavirus in French children. Emerg Infect Dis 12:1251-1253.
23. Fry AM, Lu X, Chittaganpitch M, Peret T, Fischer J, Dowell SF, Anderson LJ, Erdman D, Olsen SJ. 2007. Human bocavirus: A novel parvovirus epidemiologically associated with pneumonia requiring hospitalization in Thailand. J Infect Dis 195:1038-1045.
24. Gill CJ, Young M, Schroder K, Carvajal-Velez L, McNabb M, Aboubaker S, Qazi S, Bhutta ZA. 2013. Bottlenecks, barriers, and solutions: Results from multicountry consultations focused on reduction of childhood pneumonia and diarrhoea deaths. Lancet 381:1487-1498.
25. Han TH, Chung JY, Hwang ES. 2009a. Human bocavirus 2 in children, South Korea. Emerg Infect Dis 15:1698-1700.
26. Heegaard ED, Brown KE. 2002. Human parvovirus B19. Clin Microbiol Rev 15:485-505.
27. Hustedt JW, Christie C, Hustedt MM, Esposito D, Vazquez M. 2012. Seroepidemiology of human bocavirus infection in Jamaica. PloS ONE 7:e38206.
28. IPM, Nelson EA, Cheuk ES, Leung E, Sung R, Chan PK. 2008. Pediatric hospitalization of acute respiratory tract infections with Human Bocavirus in Hong Kong. J Clin Virol 42:72-74.
29. Jacques J, Moret H, Renois F, Leveque N, Motte J, Andreoletti L. 2008. Human Bocavirus quantitative DNA detection in French children hospitalized for acute bronchiolitis. J Clin Virol 43:142-147.
30. Jartti T, Hedman K, Jartti L, Ruuskanen O, Allander T, Soderlund- Venermo M. 2012. Human bocavirus-the first 5 years. Rev Med Virol 22:46-64.
31. Jin Y, Cheng WX, Xu ZQ, Liu N, Yu JM, Li HY, Jin M, Li DD, Zhang Q, Duan ZJ. 2011. High prevalence of human bocavirus 2 and its role in childhood acute gastroenteritis in China. J Clin Virol 52:251-253.
32. Kainulainen L, Waris M, Soderlund-Venermo M, Allander T, Hedman K, Ruuskanen O. 2008. Hepatitis and human bocavirus primary infection in a child with T-cell deficiency. J Clin Microbiol 46:4104-4105.
33. Kantola K, Hedman L, Allander T, Jartti T, Lehtinen P, Ruuskanen O, Hedman K, Soderlund-Venermo M. 2008. Serodiagnosis of human bocavirus infection. Clin Infect Dis 46:540-546.
34. Kantola K, Hedman L, Arthur J, Alibeto A, Delwart E, Jartti T, Ruuskanen O, Hedman K, Soderlund-Venermo M. 2011. Seroepidemiology of human bocaviruses 1-4. J Infect Dis 204:1403-1412.
35. Kantola K, Sadeghi M, Antikainen J, Kirveskari J, Delwart E, Hedman K, Soderlund-Venermo M. 2010. Real-time quantitative PCR detection of four human bocaviruses. J Clin Microbiol 48:4044-4050.
36. Kaplan NM, Dove W, Abu-Zeid AF, Shamoon HE, Abd-Eldayem SA, Hart CA. 2006. Human bocavirus infection among children, Jordan. Emerg Infect Dis 12:1418-1420.
37. Kapoor A, Simmonds P, Slikas E, Li L, Bodhidatta L, Sethabutr O, Triki H, Bahri O, Oderinde BS, Baba MM, Bukbuk DN, Besser J, Bartkus J, Delwart E. 2010. Human bocaviruses are highly diverse, dispersed, recombination prone, and prevalent in enteric infections. J Infect Dis 201:1633-1643.
38. Kapoor A, Slikas E, Simmonds P, Chieochansin T, Naeem A, Shaukat S, Alam MM, Sharif S, Angez M, Zaidi S, Delwart E. 2009. A newly identified bocavirus species in human stool. J Infect Dis 199:196-200.
39. Kawai K, O'Brien MA, Goveia MG, Mast TC, El Khoury. 2012. Burden of rotavirus gastroenteritis and distribution of rotavirus strains in Asia: A systematic review. Vaccine 30:1244-1254.
40. Kesebir D, Vazquez M, Weibel C, Shapiro ED, Ferguson D, Landry ML, Kahn JS. 2006. Human bocavirus infection in young children in the United States: Molecular epidemiological profile and clinical characteristics of a newly emerging respiratory virus. J Infect Dis 194:1276-1282.
41. Khamrin P, Thongprachum A, Shimizu H, Okitsu S, Mizuguchi M, Hayakawa S, Maneekarn N, Ushijima H. 2012. Detection of human bocavirus 1 and 2 from children with acute gastroenteritis in Japan. J Med Virol 84:901-905.
42. Lau SK, Yip CC, Que TL, Lee RA, Au-Yeung RK, Zhou B, So LY, Lau YL, Chan KH, Woo PC, Yuen KY. 2007. Clinical and molecular epidemiology of human bocavirus in respiratory and fecal samples from children in Hong Kong. J Infect Dis 196:986-993.
43. Lee JI, Chung JY, Han TH, Song MO, Hwang ES. 2007. Detection of human bocavirus in children hospitalized because of acute gastroenteritis. J Infect Dis 196:994-997.
44. Lin F, Zeng A, Yang N, Lin H, Yang E, Wang S, Pintel D, Qiu J. 2007. Quantification of human bocavirus in lower respiratory tract infections in China. Infect Agent Cancer 2:3.
45. Lindner J, Modrow S. 2008. Human bocavirus-A novel parvovirus to infect humans. Intervirology 51:116-122.
46. Ma X, Endo R, Ishiguro N, Ebihara T, Ishiko H, Ariga T, Kikuta H. 2006. Detection of human bocavirus in Japanese children with lower respiratory tract infections. J Clin Microbiol 44:1132-1134.
47. Manning A, Russell V, Eastick K, Leadbetter GH, Hallam N, Templeton K, Simmonds P. 2006. Epidemiological profile and clinical associations of human bocavirus and other human parvoviruses. J Infect Dis 194:1283-1290.
48. Nawaz S, Allen DJ, Aladin F, Gallimore C, Iturriza-Gomara M. 2012. Human bocaviruses are not significantly associated with gastroenteritis: Results of retesting archive DNA from a case control study in the UK. PloS ONE 7:e41346.
49. Neske F, Blessing K, Tollmann F, Schubert J, Rethwilm A, Kreth HW, Weissbrich B. 2007. Real-time PCR for diagnosis of human bocavirus infections and phylogenetic analysis. J Clin Microbiol 45:2116-2122.
50. Qu XW, Duan ZJ, Qi ZY, Xie ZP, Gao HC, Liu WP, Huang CP, Peng FW, Zheng LS, Hou YD. 2007. Human bocavirus infection, People's Republic of China. Emerg Infect Dis 13:165-168.
51. Regamey N, Frey U, Deffernez C, Latzin P, Kaiser L, Swiss Paediatric, Respiratory Research. 2007. Isolation of human bocavirus from Swiss infants with respiratory infections. Pediatr Infect Dis J 26:177-179.
52. Risku M, Katka M, Lappalainen S, Rasanen S, Vesikari T. 2012. Human bocavirus types 1, 2 and 3 in acute gastroenteritis of childhood. Acta paediatrica 101:e405-e410.
53. Schildgen O, Muller A, Allander T, Mackay IM, Volz S, Kupfer B, Simon A. 2008. Human bocavirus: Passenger or pathogen in acute respiratory tract infections?. Clin Microbiol Rev 21:291-304.
54. Schildgen O, Muller A, Simon A. 2007. Human bocavirus and gastroenteritis. Emerg Infect Dis 13:1620-1621.
55. Simmonds P, Smith DB. 1999. Structural constraints on RNA virus evolution. J Virol 73:5787-5794.
56. Sloots TP, McErlean P, Speicher DJ, Arden KE, Nissen MD, Mackay IM. 2006. Evidence of human coronavirus HKU1 and human bocavirus in Australian children. J Clin Virol 35:99-102.
57. Storz J, Leary JJ, Carlson JH, Bates RC. 1978. Parvoviruses associated with diarrhea in calves. J Am Vet Med Assoc 173:624-627.
58. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731-2739.
59. Vicente D, Cilla G, Montes M, Perez-Yarza EG, Perez-Trallero E. 2007. Human bocavirus, a respiratory and enteric virus. Emerg Infect Dis 13:636-637.
60. Walker CL, Rudan I, Liu L, Nair H, Theodoratou E, Bhutta ZA, O'Brien KL, Campbell H, Black RE. 2013. Global burden of childhood pneumonia and diarrhoea. Lancet 381:1405-1416.
61. Weissbrich B, Neske F, Schubert J, Tollmann F, Blath K, Blessing K, Kreth HW. 2006. Frequent detection of bocavirus DNA in German children with respiratory tract infections. BMC Infect Dis 6:109.
62. WHO. 2011. World Health Organization. The Immunological Basis for Immunization Series, Module 21, Rotavirus.
63. Xu ZQ, Cheng WX, Li BW, Li J, Lan B, Duan ZJ. 2011. Development of a real-time PCR assay for detecting and quantifying human bocavirus 2. J Clin Microbiol 49:1537-1541.