-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul S.F., Gish W., Miller W., Myers E.W., Lipman D.J. Basic local alignment search tool. J. Mol. Biol. 1990, 215:403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
33748799671
-
New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras
-
Ashelford K.E., Chuzhanova N.A., Fry J.C., Jones A.J., Weightman A.J. New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras. Appl. Environ. Microbiol. 2006, 72:5734-5741.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 5734-5741
-
-
Ashelford, K.E.1
Chuzhanova, N.A.2
Fry, J.C.3
Jones, A.J.4
Weightman, A.J.5
-
3
-
-
84939235410
-
Host-associated bacterial taxa from Chlorobi, Chloroflexi, GN02, Synergistetes, SR1, TM7, and WPS-2 Phyla/candidate divisions
-
Camanocha A., Dewhirst F.E. Host-associated bacterial taxa from Chlorobi, Chloroflexi, GN02, Synergistetes, SR1, TM7, and WPS-2 Phyla/candidate divisions. J. Oral Microbiol. 2014, 6:25468.
-
(2014)
J. Oral Microbiol.
, vol.6
, pp. 25468
-
-
Camanocha, A.1
Dewhirst, F.E.2
-
4
-
-
84891787231
-
Ribosomal database project: data and tools for high throughput rRNA analysis
-
Cole J.R., Wang Q., Fish J.A., Chai B., McGarrell D.M., Sun Y., Brown C.T., Porras-Alfaro A., Kuske C.R., Tiedje J.M. Ribosomal database project: data and tools for high throughput rRNA analysis. Nucleic Acids Res. 2014, 42:D633-D642.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. D633-D642
-
-
Cole, J.R.1
Wang, Q.2
Fish, J.A.3
Chai, B.4
McGarrell, D.M.5
Sun, Y.6
Brown, C.T.7
Porras-Alfaro, A.8
Kuske, C.R.9
Tiedje, J.M.10
-
5
-
-
0028126829
-
The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations
-
Collins M.D., Lawson P.A., Willems A., Cordoba J.J., Fernandez-Garayzabal J., Garcia P., Cai J., Hippe H., Farrow J.A. The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations. Int. J. Syst. Bacteriol. 1994, 44:812-826.
-
(1994)
Int. J. Syst. Bacteriol.
, vol.44
, pp. 812-826
-
-
Collins, M.D.1
Lawson, P.A.2
Willems, A.3
Cordoba, J.J.4
Fernandez-Garayzabal, J.5
Garcia, P.6
Cai, J.7
Hippe, H.8
Farrow, J.A.9
-
6
-
-
33645085330
-
Novel subgingival bacterial phylotypes detected using multiple universal polymerase chain reaction primer sets
-
de Lillo A., Ashley F.P., Palmer R.M., Munson M.A., Kyriacou L., Weightman A.J., Wade W.G. Novel subgingival bacterial phylotypes detected using multiple universal polymerase chain reaction primer sets. Oral Microbiol. Immunol. 2006, 21:61-68.
-
(2006)
Oral Microbiol. Immunol.
, vol.21
, pp. 61-68
-
-
de Lillo, A.1
Ashley, F.P.2
Palmer, R.M.3
Munson, M.A.4
Kyriacou, L.5
Weightman, A.J.6
Wade, W.G.7
-
7
-
-
33746061683
-
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
-
DeSantis T.Z., Hugenholtz P., Larsen N., Rojas M., Brodie E.L., Keller K., Huber T., Dalevi D., Hu P., Andersen G.L. Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl. Environ. Microbiol. 2006, 72:5069-5072.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 5069-5072
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
Keller, K.6
Huber, T.7
Dalevi, D.8
Hu, P.9
Andersen, G.L.10
-
8
-
-
77957357555
-
The human oral microbiome
-
Dewhirst F.E., Chen T., Izard J., Paster B.J., Tanner A.C., Yu W.H., Lakshmanan A., Wade W.G. The human oral microbiome. J. Bacteriol. 2010, 192:5002-5017.
-
(2010)
J. Bacteriol.
, vol.192
, pp. 5002-5017
-
-
Dewhirst, F.E.1
Chen, T.2
Izard, J.3
Paster, B.J.4
Tanner, A.C.5
Yu, W.H.6
Lakshmanan, A.7
Wade, W.G.8
-
9
-
-
84860444278
-
The canine oral microbiome
-
Dewhirst F.E., Klein E.A., Thompson E.C., Blanton J.M., Chen T., Milella L., Buckley C.M., Davis I.J., Bennett M.L., Marshall-Jones Z.V. The canine oral microbiome. PLoS One 2012, 7:e36067.
-
(2012)
PLoS One
, vol.7
, pp. e36067
-
-
Dewhirst, F.E.1
Klein, E.A.2
Thompson, E.C.3
Blanton, J.M.4
Chen, T.5
Milella, L.6
Buckley, C.M.7
Davis, I.J.8
Bennett, M.L.9
Marshall-Jones, Z.V.10
-
10
-
-
0000461280
-
Confidence limits on phylogenies: an approach using the bootstrap
-
Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 1985, 39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
12
-
-
0004320741
-
International Code of Nomenclature of Bacteria
-
ASM Press, Washington (DC). Chapter 3, Rules of Nomenclature with Recommendations.
-
Lapage, S.P., Sneath, P.H.A., Lessel, E.F., Skerman, V.B.D., Seeliger, H.P.R., Clark, W.A. 1992. International Code of Nomenclature of Bacteria. Bacteriological Code, 1990 Revision., ASM Press, Washington (DC). Chapter 3, Rules of Nomenclature with Recommendations.
-
(1992)
Bacteriological Code, 1990 Revision.
-
-
Lapage, S.P.1
Sneath, P.H.A.2
Lessel, E.F.3
Skerman, V.B.D.4
Seeliger, H.P.R.5
Clark, W.A.6
-
13
-
-
0023375195
-
The neighbor-joining method: a new method for reconstructing phylogenetic trees
-
Saitou N., Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 1987, 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
14
-
-
72949107142
-
Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss P.D., Westcott S.L., Ryabin T., Hall J.R., Hartmann M., Hollister E.B., Lesniewski R.A., Oakley B.B., Parks D.H., Robinson C.J., Sahl J.W., Stres B., Thallinger G.G., Van Horn D.J., Weber C.F. Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 2009, 75:7537-7541.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
Hollister, E.B.6
Lesniewski, R.A.7
Oakley, B.B.8
Parks, D.H.9
Robinson, C.J.10
Sahl, J.W.11
Stres, B.12
Thallinger, G.G.13
Van Horn, D.J.14
Weber, C.F.15
-
15
-
-
84890330527
-
MEGA6: molecular evolutionary genetics analysis version 6.0
-
Tamura K., Stecher G., Peterson D., Filipski A., Kumar S. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol. Biol. Evol. 2013, 30:2725-2729.
-
(2013)
Mol. Biol. Evol.
, vol.30
, pp. 2725-2729
-
-
Tamura, K.1
Stecher, G.2
Peterson, D.3
Filipski, A.4
Kumar, S.5
-
16
-
-
84874033512
-
Fretibacterium fastidiosum gen. nov., sp. nov., isolated from the human oral cavity
-
Vartoukian S.R., Downes J., Palmer R.M., Wade W.G. Fretibacterium fastidiosum gen. nov., sp. nov., isolated from the human oral cavity. Int. J. Syst. Evol. Microbiol. 2013, 63:458-463.
-
(2013)
Int. J. Syst. Evol. Microbiol.
, vol.63
, pp. 458-463
-
-
Vartoukian, S.R.1
Downes, J.2
Palmer, R.M.3
Wade, W.G.4
-
17
-
-
0002346727
-
Periodontology
-
Lippincotte Raven, Philadelphia, USA, B.A. Niemiec (Ed.)
-
Wiggs R.B., Lobprise H.B. Periodontology. Veterinary Dentistry, Principles and Practice 1997, 186-231. Lippincotte Raven, Philadelphia, USA. B.A. Niemiec (Ed.).
-
(1997)
Veterinary Dentistry, Principles and Practice
, pp. 186-231
-
-
Wiggs, R.B.1
Lobprise, H.B.2
-
18
-
-
33745320006
-
Anaerolinea thermolimosa sp. nov., Levilinea saccharolytica gen. nov., sp. nov. and Leptolinea tardivitalis gen. nov., sp. nov., novel filamentous anaerobes, and description of the new classes Anaerolineae classis nov. and Caldilineae classis nov. in the bacterial phylum Chloroflexi
-
Yamada T., Sekiguchi Y., Hanada S., Imachi H., Ohashi A., Harada H., Kamagata Y. Anaerolinea thermolimosa sp. nov., Levilinea saccharolytica gen. nov., sp. nov. and Leptolinea tardivitalis gen. nov., sp. nov., novel filamentous anaerobes, and description of the new classes Anaerolineae classis nov. and Caldilineae classis nov. in the bacterial phylum Chloroflexi. Int. J. Syst. Evol. Microbiol. 2006, 56:1331-1340.
-
(2006)
Int. J. Syst. Evol. Microbiol.
, vol.56
, pp. 1331-1340
-
-
Yamada, T.1
Sekiguchi, Y.2
Hanada, S.3
Imachi, H.4
Ohashi, A.5
Harada, H.6
Kamagata, Y.7
|