-
1
-
-
84878850219
-
Diversity and distribution of Blastocystis sp. subtypes in non-human primates
-
Alfellani MA, Jacob AS, Perea NO et al. (2013) Diversity and distribution of Blastocystis sp. subtypes in non-human primates. Parasitology, 140, 966-971.
-
(2013)
Parasitology
, vol.140
, pp. 966-971
-
-
Alfellani, M.A.1
Jacob, A.S.2
Perea, N.O.3
-
2
-
-
79961109150
-
BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons
-
Alikhan NF, Petty NK, Ben Zakour NL, Beatson SA (2011) BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons. BMC Genomics, 12, 402.
-
(2011)
BMC Genomics
, vol.12
, pp. 402
-
-
Alikhan, N.F.1
Petty, N.K.2
Ben Zakour, N.L.3
Beatson, S.A.4
-
3
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. Journal of Molecular Biology, 215, 403-410.
-
(1990)
Journal of Molecular Biology
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
4
-
-
77956644833
-
Reproduction and infant pelage colouration of the banded leaf monkey (Mammalia: Primates: Cercopithecidae) in Singapore
-
Ang A, Ismail MRB, Meier R (2010) Reproduction and infant pelage colouration of the banded leaf monkey (Mammalia: Primates: Cercopithecidae) in Singapore. The Raffles Bulletin of Zoology, 58, 411-415.
-
(2010)
The Raffles Bulletin of Zoology
, vol.58
, pp. 411-415
-
-
Ang, A.1
Ismail, M.R.B.2
Meier, R.3
-
5
-
-
84866345010
-
Low genetic variability in the recovering urban banded leaf monkey population of Singapore
-
Ang A, Srivasthan A, Md-Zain BM, Ismail MRB, Meier R (2012) Low genetic variability in the recovering urban banded leaf monkey population of Singapore. The Raffles Bulletin of Zoology, 60, 589-594.
-
(2012)
The Raffles Bulletin of Zoology
, vol.60
, pp. 589-594
-
-
Ang, A.1
Srivasthan, A.2
Md-Zain, B.M.3
Ismail, M.R.B.4
Meier, R.5
-
7
-
-
34249986709
-
Plant DNA sequences from feces: potential means for assessing diets of wild primates
-
Bradley BJ, Stiller M, Doran-Sheehy DM et al. (2007) Plant DNA sequences from feces: potential means for assessing diets of wild primates. American Journal of Primatology, 69, 699-705.
-
(2007)
American Journal of Primatology
, vol.69
, pp. 699-705
-
-
Bradley, B.J.1
Stiller, M.2
Doran-Sheehy, D.M.3
-
8
-
-
84866760894
-
OligoTag: a program for designing sets of tags for Next-Generation Sequencing of multiplexed samples
-
In (eds Pompanon F & Bonin A). Humana Press, New York.
-
Coissac E (2012) OligoTag: a program for designing sets of tags for Next-Generation Sequencing of multiplexed samples. In: Data Production and Analyses in Population Genomics (eds Pompanon F & Bonin A), pp. 13-31. Humana Press, New York.
-
(2012)
Data Production and Analyses in Population Genomics
, pp. 13-31
-
-
Coissac, E.1
-
9
-
-
84859574767
-
Bioinformatic challenges for DNA metabarcoding of plants and animals (2012)
-
Coissac E, Riaz T, Puillandre N (2012) Bioinformatic challenges for DNA metabarcoding of plants and animals (2012). Molecular Ecology, 21, 1834-1847.
-
(2012)
Molecular Ecology
, vol.21
, pp. 1834-1847
-
-
Coissac, E.1
Riaz, T.2
Puillandre, N.3
-
10
-
-
84894242220
-
DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet
-
De Barba M, Miquel C, Boyer F et al. (2014) DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet. Molecular Ecology Resources, 14, 306-323.
-
(2014)
Molecular Ecology Resources
, vol.14
, pp. 306-323
-
-
De Barba, M.1
Miquel, C.2
Boyer, F.3
-
11
-
-
38849163396
-
Studying seabird diet through genetic analysis of faeces: a case study on macaroni penguins (Eudyptes chrysolophus)
-
Deagle BE, Gales NJ, Evans K et al. (2007) Studying seabird diet through genetic analysis of faeces: a case study on macaroni penguins (Eudyptes chrysolophus). PLoS ONE, 2, e831.
-
(2007)
PLoS ONE
, vol.2
, pp. e831
-
-
Deagle, B.E.1
Gales, N.J.2
Evans, K.3
-
12
-
-
77956879874
-
Pyrosequencing faecal DNA to determine diet of little penguins: is what goes in what comes out?
-
Deagle BE, Chiaradia A, McInnes J, Jarman SN (2010) Pyrosequencing faecal DNA to determine diet of little penguins: is what goes in what comes out? Conservation Genetics, 11, 2039-2048.
-
(2010)
Conservation Genetics
, vol.11
, pp. 2039-2048
-
-
Deagle, B.E.1
Chiaradia, A.2
McInnes, J.3
Jarman, S.N.4
-
13
-
-
0030054023
-
Plant wax components: a new approach to estimating intake and diet composition in herbivores
-
Dove H, Mayes RW (1996) Plant wax components: a new approach to estimating intake and diet composition in herbivores. Journal of Nutrition, 126, 13-26.
-
(1996)
Journal of Nutrition
, vol.126
, pp. 13-26
-
-
Dove, H.1
Mayes, R.W.2
-
14
-
-
84922619490
-
Using genetics as a tool in primate conservation
-
Ferreira da Silva MJ, Minhos T, Sa RM, Bruford MW (2012) Using genetics as a tool in primate conservation. Nature Education Knowledge, 3, 89.
-
(2012)
Nature Education Knowledge
, vol.3
, pp. 89
-
-
Ferreira da Silva, M.J.1
Minhos, T.2
Sa, R.M.3
Bruford, M.W.4
-
15
-
-
77954554269
-
An in silico approach for the evaluation of DNA barcodes
-
Ficetola GF, Coissac E, Zundel S et al. (2010) An in silico approach for the evaluation of DNA barcodes. BMC Genomics, 11, 434.
-
(2010)
BMC Genomics
, vol.11
, pp. 434
-
-
Ficetola, G.F.1
Coissac, E.2
Zundel, S.3
-
16
-
-
74349110379
-
Using the metagenomics RAST server (MG-RAST) for analyzing shotgun metagenomes
-
Glass EM, Wilkening J, Wilke A, Antonopoulos D, Meyer F (2010) Using the metagenomics RAST server (MG-RAST) for analyzing shotgun metagenomes. Cold Spring Harbor Protocols, doi: 10.1101/pdb.prot5368.
-
(2010)
Cold Spring Harbor Protocols
-
-
Glass, E.M.1
Wilkening, J.2
Wilke, A.3
Antonopoulos, D.4
Meyer, F.5
-
17
-
-
84875797249
-
Unveiling the diet of elusive rainforest herbivores in Next Generation Sequencing era? The Tapir as a case study
-
Hilbert F, Taberlet P, Chave J, Scotti-Saintagne C, Sabatier D, Richard-Hansen C (2013) Unveiling the diet of elusive rainforest herbivores in Next Generation Sequencing era? The Tapir as a case study. PLoS ONE, 8, e60799.
-
(2013)
PLoS ONE
, vol.8
, pp. e60799
-
-
Hilbert, F.1
Taberlet, P.2
Chave, J.3
Scotti-Saintagne, C.4
Sabatier, D.5
Richard-Hansen, C.6
-
19
-
-
37549050969
-
A comprehensive phylogeny of beetles reveals the evolutionary origins of a superradiation
-
Hunt T, Bergsten J, Levkanicova Z et al. (2007) A comprehensive phylogeny of beetles reveals the evolutionary origins of a superradiation. Science, 318, 1913-1916.
-
(2007)
Science
, vol.318
, pp. 1913-1916
-
-
Hunt, T.1
Bergsten, J.2
Levkanicova, Z.3
-
20
-
-
1942517869
-
Group-specific polymerase chain reaction for DNA-based analysis of species diversity and identity in dietary samples
-
Jarman SN, Deagle BE, Gales NJ (2004) Group-specific polymerase chain reaction for DNA-based analysis of species diversity and identity in dietary samples. Molecular Ecology, 13, 1313-1322.
-
(2004)
Molecular Ecology
, vol.13
, pp. 1313-1322
-
-
Jarman, S.N.1
Deagle, B.E.2
Gales, N.J.3
-
21
-
-
0036226603
-
BLAT-the BLAST-like alignment tool
-
Kent WJ (2002) BLAT-the BLAST-like alignment tool. Genome Research, 12, 656-664.
-
(2002)
Genome Research
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
-
23
-
-
84869196690
-
An update on DNA barcoding: low species coverage and numerous unidentified sequences
-
Kwong S, Srivathsan A, Meier R (2012) An update on DNA barcoding: low species coverage and numerous unidentified sequences. Cladistics, 28, 639-644.
-
(2012)
Cladistics
, vol.28
, pp. 639-644
-
-
Kwong, S.1
Srivathsan, A.2
Meier, R.3
-
24
-
-
80053052840
-
Genetic characterization of Strongyloides spp. from captive, semi-captive and wild Bornean orangutans (Pongo pygmaeus) in Central and East Kalimantan, Borneo, Indonesia
-
Labes EM, Nurcahyo W, Deplazes P, Mathis A (2011) Genetic characterization of Strongyloides spp. from captive, semi-captive and wild Bornean orangutans (Pongo pygmaeus) in Central and East Kalimantan, Borneo, Indonesia. Parasitology, 138, 1417-1422.
-
(2011)
Parasitology
, vol.138
, pp. 1417-1422
-
-
Labes, E.M.1
Nurcahyo, W.2
Deplazes, P.3
Mathis, A.4
-
25
-
-
0032221248
-
Primate digestion: interactions among anatomy, physiology, and feeding ecology
-
Lambert JE (1998) Primate digestion: interactions among anatomy, physiology, and feeding ecology. Evolutionary Anthropology, 7, 8-20.
-
(1998)
Evolutionary Anthropology
, vol.7
, pp. 8-20
-
-
Lambert, J.E.1
-
26
-
-
79955794476
-
Comparative fecal metagenomics unveils unique functional capacity of the swine gut
-
Lamendella R, Domingo JW, Ghosh S, Martinson J, Oerther DB (2011) Comparative fecal metagenomics unveils unique functional capacity of the swine gut. BMC Microbiology, 11, 103.
-
(2011)
BMC Microbiology
, vol.11
, pp. 103
-
-
Lamendella, R.1
Domingo, J.W.2
Ghosh, S.3
Martinson, J.4
Oerther, D.B.5
-
27
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler Transform
-
Li H, Durbin R (2009) Fast and accurate short read alignment with Burrows-Wheeler Transform. Bioinformatics, 25, 1754-1760.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
28
-
-
85028273316
-
Plant DNA barcoding: from gene to genome
-
Li X, Yang Y, Henry RJ, Rossetto M, Want Y, Chen S (2014) Plant DNA barcoding: from gene to genome. Biological Reviews, doi:10.1111/brv.12104.
-
(2014)
Biological Reviews
-
-
Li, X.1
Yang, Y.2
Henry, R.J.3
Rossetto, M.4
Want, Y.5
Chen, S.6
-
29
-
-
84942887758
-
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
-
Luo R, Liu B, Xie Y et al. (2012) SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. Gigascience, 1, 18.
-
(2012)
Gigascience
, vol.1
, pp. 18
-
-
Luo, R.1
Liu, B.2
Xie, Y.3
-
30
-
-
33749535839
-
DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success
-
Meier R, Shiyang K, Vaidya G, Ng PKL (2006) DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success. Systematic Biology, 55, 715-728.
-
(2006)
Systematic Biology
, vol.55
, pp. 715-728
-
-
Meier, R.1
Shiyang, K.2
Vaidya, G.3
Ng, P.K.L.4
-
31
-
-
80053605834
-
DNA-Based faecal dietary analysis: a comparison of qPCR and High Throughput Sequencing approaches
-
Murray DC, Bunce M, Cannell BL et al. (2011) DNA-Based faecal dietary analysis: a comparison of qPCR and High Throughput Sequencing approaches. PLoS ONE, 6, e25776.
-
(2011)
PLoS ONE
, vol.6
, pp. e25776
-
-
Murray, D.C.1
Bunce, M.2
Cannell, B.L.3
-
32
-
-
79952305603
-
Chloroplast genome sequences from total DNA for plant identification
-
Nock CJ, Waters DL, Edwards MA et al. (2011) Chloroplast genome sequences from total DNA for plant identification. Plant Biotechnology Journal, 9, 328-333.
-
(2011)
Plant Biotechnology Journal
, vol.9
, pp. 328-333
-
-
Nock, C.J.1
Waters, D.L.2
Edwards, M.A.3
-
33
-
-
0025230558
-
DNA damage promotes jumping between templates during enzymatic amplification
-
Paabo S, Irwin DM, Wilson AC (1990) DNA damage promotes jumping between templates during enzymatic amplification. Journal of Biological Chemistry, 265, 4718-4721.
-
(1990)
Journal of Biological Chemistry
, vol.265
, pp. 4718-4721
-
-
Paabo, S.1
Irwin, D.M.2
Wilson, A.C.3
-
34
-
-
0025597229
-
Sandeels in the diets of seals - application of novel and conventional methods of analysis to feces from seals in the Moray Firth area of Scotland
-
Pierce GJ, Boyle PR, Diack JSW, Clark I (1990) Sandeels in the diets of seals - application of novel and conventional methods of analysis to feces from seals in the Moray Firth area of Scotland. Journal of the Marine Biological Association of the United Kingdom, 70, 829-840.
-
(1990)
Journal of the Marine Biological Association of the United Kingdom
, vol.70
, pp. 829-840
-
-
Pierce, G.J.1
Boyle, P.R.2
Diack, J.S.W.3
Clark, I.4
-
35
-
-
84859602598
-
Who is eating what: diet assessment using next generation sequencing
-
Pompanon F, Deagle BE, Symondson WOC, Brown DS, Jarman SN, Taberlet P (2012) Who is eating what: diet assessment using next generation sequencing. Molecular Ecology, 21, 1931-1950.
-
(2012)
Molecular Ecology
, vol.21
, pp. 1931-1950
-
-
Pompanon, F.1
Deagle, B.E.2
Symondson, W.O.C.3
Brown, D.S.4
Jarman, S.N.5
Taberlet, P.6
-
36
-
-
84875104888
-
A DNA Metabarcoding study of a primate dietary diversity and plasticity across its entire fragmented range
-
Quéméré E, Hilbert F, Miquel C et al. (2013) A DNA Metabarcoding study of a primate dietary diversity and plasticity across its entire fragmented range. PLoS ONE, 8, e58971.
-
(2013)
PLoS ONE
, vol.8
, pp. e58971
-
-
Quéméré, E.1
Hilbert, F.2
Miquel, C.3
-
37
-
-
84863304598
-
-
R Foundation for Statistical Computing, Vienna, Austria.
-
R Development Core Team (2011). R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0, URL http://www.R-project.org/.
-
(2011)
R: A Language and Environment for Statistical Computing
-
-
-
38
-
-
79951860106
-
Detection distance and environmental factors in conservation detection dog surveys
-
Reed SE, Bidlack AL, Hurt A, Getz WM (2011) Detection distance and environmental factors in conservation detection dog surveys. The Journal of Wildlife Management, 75, 243-251.
-
(2011)
The Journal of Wildlife Management
, vol.75
, pp. 243-251
-
-
Reed, S.E.1
Bidlack, A.L.2
Hurt, A.3
Getz, W.M.4
-
39
-
-
84859617279
-
Carnivore diet analysis based on next-generation sequencing: application to the leopard cat (Prionailurus bengalensis) in Pakistan
-
Shehzad W, Riaz T, Nawaz MA et al. (2012) Carnivore diet analysis based on next-generation sequencing: application to the leopard cat (Prionailurus bengalensis) in Pakistan. Molecular Ecology, 21, 1951-1965.
-
(2012)
Molecular Ecology
, vol.21
, pp. 1951-1965
-
-
Shehzad, W.1
Riaz, T.2
Nawaz, M.A.3
-
40
-
-
79957988440
-
Increased sampling reveals novel lineages of Entamoeba: consequences of genetic diversity and host specificity for taxonomy and molecular detection
-
Stensvold CR, Lebbad M, Victory EL et al. (2011) Increased sampling reveals novel lineages of Entamoeba: consequences of genetic diversity and host specificity for taxonomy and molecular detection. Protist, 162, 525-541.
-
(2011)
Protist
, vol.162
, pp. 525-541
-
-
Stensvold, C.R.1
Lebbad, M.2
Victory, E.L.3
-
41
-
-
0036010821
-
Molecular identification of prey in predator diets
-
Symondson WO (2002) Molecular identification of prey in predator diets. Molecular Ecology, 11, 627-641.
-
(2002)
Molecular Ecology
, vol.11
, pp. 627-641
-
-
Symondson, W.O.1
-
42
-
-
33847371187
-
Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding
-
Taberlet P, Coissac E, Pompanon F et al. (2007) Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding. Nucleic Acids Research, 35, e14.
-
(2007)
Nucleic Acids Research
, vol.35
, pp. e14
-
-
Taberlet, P.1
Coissac, E.2
Pompanon, F.3
-
43
-
-
84859598363
-
Towards next-generation biodiversity assessment using DNA metabarcoding
-
Taberlet P, Coissac E, Pompanon F, Brochmann C, Willerslev E (2012) Towards next-generation biodiversity assessment using DNA metabarcoding. Molecular Ecology, 21, 2045-2050.
-
(2012)
Molecular Ecology
, vol.21
, pp. 2045-2050
-
-
Taberlet, P.1
Coissac, E.2
Pompanon, F.3
Brochmann, C.4
Willerslev, E.5
-
44
-
-
58949104467
-
New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach
-
Valentini A, Miquel C, Nawaz MA et al. (2009) New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach. Molecular Ecology Resources, 9, 51-60.
-
(2009)
Molecular Ecology Resources
, vol.9
, pp. 51-60
-
-
Valentini, A.1
Miquel, C.2
Nawaz, M.A.3
-
46
-
-
84870930021
-
Improving PCR detection of prey in molecular diet studies: importance of group-specific primer set selection and extraction protocol performances
-
Zarzoso-Lacoste D, Corse E, Vidal E (2013) Improving PCR detection of prey in molecular diet studies: importance of group-specific primer set selection and extraction protocol performances. Molecular Ecology Resources, 13, 117-127.
-
(2013)
Molecular Ecology Resources
, vol.13
, pp. 117-127
-
-
Zarzoso-Lacoste, D.1
Corse, E.2
Vidal, E.3
-
47
-
-
85006186573
-
Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification
-
Zhou X, Li Y, Liu S et al. (2013) Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification. Gigascience, 2, 4.
-
(2013)
Gigascience
, vol.2
, pp. 4
-
-
Zhou, X.1
Li, Y.2
Liu, S.3
|