-
1
-
-
60149088848
-
Origins and Mechanisms of miRNAs and siRNAs
-
PID: 19239886, COI: 1:CAS:528:DC%2BD1MXkvFGksb0%3D
-
Carthew RW, Sontheimer EJ (2009) Origins and Mechanisms of miRNAs and siRNAs. Cell 136:642–655
-
(2009)
Cell
, vol.136
, pp. 642-655
-
-
Carthew, R.W.1
Sontheimer, E.J.2
-
2
-
-
77955644289
-
Mammalian microRNAs predominantly act to decrease target mRNA levels
-
PID: 20703300, COI: 1:CAS:528:DC%2BC3cXhtVais7nN
-
Guo H, Ingolia NT, Weissman JS, Bartel DP (2010) Mammalian microRNAs predominantly act to decrease target mRNA levels. Nature 466:835–840
-
(2010)
Nature
, vol.466
, pp. 835-840
-
-
Guo, H.1
Ingolia, N.T.2
Weissman, J.S.3
Bartel, D.P.4
-
3
-
-
78751477191
-
Gene silencing by microRNAs: contributions of translational repression and mRNA decay
-
PID: 21245828, COI: 1:CAS:528:DC%2BC3MXmsVelsw%3D%3D
-
Huntzinger E, Izaurralde E (2011) Gene silencing by microRNAs: contributions of translational repression and mRNA decay. Nat Rev Genet 12:99–110
-
(2011)
Nat Rev Genet
, vol.12
, pp. 99-110
-
-
Huntzinger, E.1
Izaurralde, E.2
-
4
-
-
0347444723
-
MicroRNAs: genomics, biogenesis, mechanism, and function
-
PID: 14744438, COI: 1:CAS:528:DC%2BD2cXhtVals7o%3D
-
Bartel DP (2004) MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 116:281–297
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
5
-
-
0036544755
-
Micro RNAs are complementary to 3′ UTR sequence motifs that mediate negative post-transcriptional regulation
-
PID: 11896390, COI: 1:CAS:528:DC%2BD38Xisl2lsL8%3D
-
Lai EC (2002) Micro RNAs are complementary to 3′ UTR sequence motifs that mediate negative post-transcriptional regulation. Nat Genet 30:363–364
-
(2002)
Nat Genet
, vol.30
, pp. 363-364
-
-
Lai, E.C.1
-
6
-
-
0346094457
-
Prediction of mammalian microRNA targets
-
PID: 14697198, COI: 1:CAS:528:DC%2BD2cXhsFCnsw%3D%3D
-
Lewis BP, Shih IH, Jones-Rhoades MW, Bartel DP, Burge CB (2003) Prediction of mammalian microRNA targets. Cell 115:787–798
-
(2003)
Cell
, vol.115
, pp. 787-798
-
-
Lewis, B.P.1
Shih, I.H.2
Jones-Rhoades, M.W.3
Bartel, D.P.4
Burge, C.B.5
-
7
-
-
38549124383
-
The microRNA.org resource: targets and expression
-
PID: 18158296, COI: 1:CAS:528:DC%2BD1cXhtVSrurg%3D
-
Betel D, Wilson M, Gabow A, Marks DS, Sander C (2008) The microRNA.org resource: targets and expression. Nucleic Acids Res 36:D149–D153
-
(2008)
Nucleic Acids Res
, vol.36
, pp. D149-D153
-
-
Betel, D.1
Wilson, M.2
Gabow, A.3
Marks, D.S.4
Sander, C.5
-
8
-
-
60149095444
-
Most mammalian mRNAs are conserved targets of microRNAs
-
PID: 18955434, COI: 1:CAS:528:DC%2BD1MXptFWjuw%3D%3D
-
Friedman RC, Farh KK, Burge CB, Bartel DP (2009) Most mammalian mRNAs are conserved targets of microRNAs. Genome Res 19:92–105
-
(2009)
Genome Res
, vol.19
, pp. 92-105
-
-
Friedman, R.C.1
Farh, K.K.2
Burge, C.B.3
Bartel, D.P.4
-
9
-
-
20944450160
-
Combinatorial microRNA target predictions
-
PID: 15806104, COI: 1:CAS:528:DC%2BD2MXjsF2ksrw%3D
-
Krek A, Grun D, Poy MN, Wolf R, Rosenberg L et al (2005) Combinatorial microRNA target predictions. Nat Genet 37:495–500
-
(2005)
Nat Genet
, vol.37
, pp. 495-500
-
-
Krek, A.1
Grun, D.2
Poy, M.N.3
Wolf, R.4
Rosenberg, L.5
-
10
-
-
34250877841
-
A mammalian microRNA expression atlas based on small RNA library sequencing
-
PID: 17604727, COI: 1:CAS:528:DC%2BD2sXotV2hsLk%3D
-
Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N et al (2007) A mammalian microRNA expression atlas based on small RNA library sequencing. Cell 129:1401–1414
-
(2007)
Cell
, vol.129
, pp. 1401-1414
-
-
Landgraf, P.1
Rusu, M.2
Sheridan, R.3
Sewer, A.4
Iovino, N.5
-
11
-
-
41649102715
-
Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa
-
PID: 18323537, COI: 1:CAS:528:DC%2BD1cXks1alsLo%3D
-
Morin RD, Aksay G, Dolgosheina E, Ebhardt HA, Magrini V et al (2008) Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa. Genome Res 18:571–584
-
(2008)
Genome Res
, vol.18
, pp. 571-584
-
-
Morin, R.D.1
Aksay, G.2
Dolgosheina, E.3
Ebhardt, H.A.4
Magrini, V.5
-
12
-
-
79959386594
-
A comprehensive survey of miRNA repertoire and 3′ addition events in the placentas of patients with pre-eclampsia from high-throughput sequencing
-
PID: 21731650, COI: 1:CAS:528:DC%2BC3MXotF2gtbs%3D
-
Guo L, Yang Q, Lu J, Li H, Ge Q et al (2011) A comprehensive survey of miRNA repertoire and 3′ addition events in the placentas of patients with pre-eclampsia from high-throughput sequencing. PLoS One 6:e21072
-
(2011)
PLoS One
, vol.6
, pp. e21072
-
-
Guo, L.1
Yang, Q.2
Lu, J.3
Li, H.4
Ge, Q.5
-
13
-
-
84867736206
-
IsomiRs: the overlooked repertoire in the dynamic microRNAome
-
PID: 22883467, COI: 1:CAS:528:DC%2BC38XhtFKit7rL
-
Neilsen CT, Goodall GJ, Bracken CP (2012) IsomiRs: the overlooked repertoire in the dynamic microRNAome. Trends Genet 28:544–549
-
(2012)
Trends Genet
, vol.28
, pp. 544-549
-
-
Neilsen, C.T.1
Goodall, G.J.2
Bracken, C.P.3
-
14
-
-
78149332037
-
Complexity of the microRNA repertoire revealed by next generation sequencing
-
PID: 20876832, COI: 1:CAS:528:DC%2BC3cXhsVGhsL%2FK
-
Lee LW, Zhang S, Etheridge A, Ma L, Martin D et al (2010) Complexity of the microRNA repertoire revealed by next generation sequencing. RNA 16:2170–2180. doi:10.1261/rna.2225110
-
(2010)
RNA
, vol.16
, pp. 2170-2180
-
-
Lee, L.W.1
Zhang, S.2
Etheridge, A.3
Ma, L.4
Martin, D.5
-
15
-
-
78649255480
-
A comprehensive survey of 3′ animal miRNA modification events and a possible role for 3′ adenylation in modulating miRNA targeting effectiveness
-
PID: 20719920, COI: 1:CAS:528:DC%2BC3cXht12jsrnK
-
Burroughs AM, Ando Y, de Hoon MJL, Tomaru Y, Nishibu T et al (2010) A comprehensive survey of 3′ animal miRNA modification events and a possible role for 3′ adenylation in modulating miRNA targeting effectiveness. Genome Res 20:1398–1410
-
(2010)
Genome Res
, vol.20
, pp. 1398-1410
-
-
Burroughs, A.M.1
Ando, Y.2
de Hoon, M.J.L.3
Tomaru, Y.4
Nishibu, T.5
-
16
-
-
84860348037
-
Tracking miRNA precursor metabolic products and processing sites through completely analyzing high-throughput sequencing data
-
PID: 21633885, COI: 1:CAS:528:DC%2BC38XhvVyisQ%3D%3D
-
Guo L, Li H, Lu J, Yang Q, Ge Q et al (2012) Tracking miRNA precursor metabolic products and processing sites through completely analyzing high-throughput sequencing data. Mol Biol Rep 39:2031–2038
-
(2012)
Mol Biol Rep
, vol.39
, pp. 2031-2038
-
-
Guo, L.1
Li, H.2
Lu, J.3
Yang, Q.4
Ge, Q.5
-
17
-
-
65849172363
-
Meta-analysis of small RNA-sequencing errors reveals ubiquitous post-transcriptional RNA modifications
-
PID: 19255090, COI: 1:CAS:528:DC%2BD1MXlsleqsrw%3D
-
Ebhardt HA, Tsang HH, Dai DC, Liu YF, Bostan B et al (2009) Meta-analysis of small RNA-sequencing errors reveals ubiquitous post-transcriptional RNA modifications. Nucleic Acids Res 37:2461–2470
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 2461-2470
-
-
Ebhardt, H.A.1
Tsang, H.H.2
Dai, D.C.3
Liu, Y.F.4
Bostan, B.5
-
18
-
-
77957312307
-
Dynamic isomiR regulation in Drosophila development
-
PID: 20805289, COI: 1:CAS:528:DC%2BC3cXht1KjtbjM
-
Fernandez-Valverde SL, Taft RJ, Mattick JS (2010) Dynamic isomiR regulation in Drosophila development. RNA 16:1881–1888
-
(2010)
RNA
, vol.16
, pp. 1881-1888
-
-
Fernandez-Valverde, S.L.1
Taft, R.J.2
Mattick, J.S.3
-
19
-
-
78651293534
-
miRBase: integrating microRNA annotation and deep-sequencing data
-
PID: 21037258, COI: 1:CAS:528:DC%2BC3sXivF2murs%3D
-
Kozomara A, Griffiths-Jones S (2011) miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res 39:D152–D157
-
(2011)
Nucleic Acids Res
, vol.39
, pp. D152-D157
-
-
Kozomara, A.1
Griffiths-Jones, S.2
-
20
-
-
14044251458
-
Human MicroRNA targets
-
PID: 15502875
-
John B, Enright AJ, Aravin A, Tuschl T, Sander C et al (2004) Human MicroRNA targets. PLoS Biol 2:e363
-
(2004)
PLoS Biol
, vol.2
, pp. e363
-
-
John, B.1
Enright, A.J.2
Aravin, A.3
Tuschl, T.4
Sander, C.5
-
21
-
-
64549161034
-
Adenylation of plant miRNAs
-
PID: 19188256, COI: 1:CAS:528:DC%2BD1MXktV2qsr8%3D
-
Lu SF, Sun YH, Chiang VL (2009) Adenylation of plant miRNAs. Nucleic Acids Res 37:1878–1885
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 1878-1885
-
-
Lu, S.F.1
Sun, Y.H.2
Chiang, V.L.3
-
22
-
-
52949093215
-
Mouse let-7 miRNA populations exhibit RNA editing that is constrained in the 5′-seed/cleavage/anchor regions and stabilize predicted mmu-let-7a: mRNA duplexes
-
PID: 18614752, COI: 1:CAS:528:DC%2BD1cXht1elu7%2FO
-
Reid JG, Nagaraja AK, Lynn FC, Drabek RB, Muzny DM et al (2008) Mouse let-7 miRNA populations exhibit RNA editing that is constrained in the 5′-seed/cleavage/anchor regions and stabilize predicted mmu-let-7a: mRNA duplexes. Genome Res 18:1571–1581
-
(2008)
Genome Res
, vol.18
, pp. 1571-1581
-
-
Reid, J.G.1
Nagaraja, A.K.2
Lynn, F.C.3
Drabek, R.B.4
Muzny, D.M.5
-
23
-
-
0037009364
-
MicroRNA maturation: stepwise processing and subcellular localization
-
PID: 12198168, COI: 1:CAS:528:DC%2BD38Xms1KmsL4%3D
-
Lee Y, Jeon K, Lee JT, Kim S, Kim VN (2002) MicroRNA maturation: stepwise processing and subcellular localization. EMBO J 21:4663–4670
-
(2002)
EMBO J
, vol.21
, pp. 4663-4670
-
-
Lee, Y.1
Jeon, K.2
Lee, J.T.3
Kim, S.4
Kim, V.N.5
-
24
-
-
0037087780
-
miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs
-
PID: 11914277, COI: 1:CAS:528:DC%2BD38XisVaju7c%3D
-
Mourelatos Z, Dostie J, Paushkin S, Sharma A, Charroux B et al (2002) miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs. Genes Dev 16:720–728
-
(2002)
Genes Dev
, vol.16
, pp. 720-728
-
-
Mourelatos, Z.1
Dostie, J.2
Paushkin, S.3
Sharma, A.4
Charroux, B.5
-
25
-
-
0037321349
-
New microRNAs from mouse and human
-
PID: 12554859, COI: 1:CAS:528:DC%2BD3sXhtVWnu7o%3D
-
Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T (2003) New microRNAs from mouse and human. RNA 9:175–179
-
(2003)
RNA
, vol.9
, pp. 175-179
-
-
Lagos-Quintana, M.1
Rauhut, R.2
Meyer, J.3
Borkhardt, A.4
Tuschl, T.5
-
27
-
-
0041941514
-
The small RNA profile during Drosophila melanogaster development
-
PID: 12919683, COI: 1:CAS:528:DC%2BD3sXmvVCitLs%3D
-
Aravin AA, Lagos-Quintana M, Yalcin A, Zavolan M, Marks D et al (2003) The small RNA profile during Drosophila melanogaster development. Dev Cell 5:337–350
-
(2003)
Dev Cell
, vol.5
, pp. 337-350
-
-
Aravin, A.A.1
Lagos-Quintana, M.2
Yalcin, A.3
Zavolan, M.4
Marks, D.5
-
28
-
-
77955422438
-
Global expression analysis of miRNA gene cluster and family based on isomiRs from deep sequencing data
-
PID: 20619743, COI: 1:CAS:528:DC%2BC3cXps1aqsr4%3D
-
Guo L, Lu Z (2010) Global expression analysis of miRNA gene cluster and family based on isomiRs from deep sequencing data. Comput Biol Chem 34:165–171
-
(2010)
Comput Biol Chem
, vol.34
, pp. 165-171
-
-
Guo, L.1
Lu, Z.2
-
29
-
-
84881551262
-
Close association between paralogous multiple isomiRs and paralogous/orthologues miRNA sequences implicates dominant sequence selection across various animal species
-
Guo L, Zhao Y, Zhang H, Yang S, Chen F (2013) Close association between paralogous multiple isomiRs and paralogous/orthologues miRNA sequences implicates dominant sequence selection across various animal species. Gene 527:624–629
-
(2013)
Gene
, vol.527
, pp. 624-629
-
-
Guo, L.1
Zhao, Y.2
Zhang, H.3
Yang, S.4
Chen, F.5
|