-
1
-
-
0013187276
-
Re-engineering plant gene targeting
-
Britt, A. B., and May, G. D. (2003). Re-engineering plant gene targeting. TrendsPlant Sci. 8, 90-95. doi: 10.1016/S1360-1385(03)00002-5
-
(2003)
Trendsplant Sci
, vol.8
, pp. 90-95
-
-
Britt, A.B.1
May, G.D.2
-
2
-
-
0024449118
-
Transposon mutagenesis of baculoviruses: Analysis of Trichoplusia ni transposon IFP2 insertions within the FP-locus of nuclear polyhedrosis viruses
-
Cary, L. C., Goebel, M., Corsaro, B. G., Wang, H. G., Rosen, E., and Fraser, M. J. (1989). Transposon mutagenesis of baculoviruses: analysis of Trichoplusia ni transposon IFP2 insertions within the FP-locus of nuclear polyhedrosis viruses. Virology 172, 156-169. doi: 10.1016/0042-6822(89)90117-7
-
(1989)
Virology
, vol.172
, pp. 156-169
-
-
Cary, L.C.1
Goebel, M.2
Corsaro, B.G.3
Wang, H.G.4
Rosen, E.5
Fraser, M.J.6
-
3
-
-
84890490622
-
Gene editing; a constitutively active OsRac1 by homologous recombination based gene targeting induces immune responses in rice
-
Dang, T. T., Shimatani, Z., Kawano, Y., Terada, R., and Shimamoto, K. (2013). Gene editing; a constitutively active OsRac1 by homologous recombination based gene targeting induces immune responses in rice. Plant Cell Physiol. 54, 2058-2070. doi: 10.1093/pcp/pct147
-
(2013)
Plant Cell Physiol
, vol.54
, pp. 2058
-
-
Dang, T.T.1
Shimatani, Z.2
Kawano, Y.3
Terada, R.4
Shimamoto, K.5
-
4
-
-
0031105085
-
Cell ablation and the analysis of plant development
-
Day, C. D., and Irish, V. F. (1997).Cell ablation and the analysis of plant development. TrendsPlantSci. 2, 106-111. doi: 10.1016/S1360-1385(97)01004-2
-
(1997)
Trendsplantsci
, vol.2
, pp. 106-111
-
-
Day, C.D.1
Irish, V.F.2
-
5
-
-
34748901919
-
Molecular breeding of a novel herbicide-tolerant rice by gene targeting
-
Endo, M., Osakabe, K., Ono, K., Handa, H., Shimizu, T., and Toki, S. (2007). Molecular breeding of a novel herbicide-tolerant rice by gene targeting. Plant J. 52, 157-166. doi: 10.1111/j.1365-313X.2007.03230.x
-
(2007)
Plant J
, vol.52
, pp. 157-166
-
-
Endo, M.1
Osakabe, K.2
Ono, K.3
Handa, H.4
Shimizu, T.5
Toki, S.6
-
6
-
-
84894257656
-
Toward establishing an efficient and versatile gene targeting system in higher plants. Biocatal. Agric
-
Endo, M., and Toki, S. (2014).Toward establishing an efficient and versatile gene targeting system in higher plants. Biocatal. Agric. Biotechnol. 3, 2-6. doi: 10.1016/j.bcab.2013.10.002
-
(2014)
Biotechnol
, vol.3
, pp. 2-6
-
-
Endo, M.1
Toki, S.2
-
7
-
-
0032991835
-
Positive-negativeselection and T-DNA stability in Arabidopsis transformation
-
Gallego, M. E., Sirand-Pugnet, P., andWhite, C. I. (1999). Positive-negativeselection and T-DNA stability in Arabidopsis transformation. Plant Mol. Biol. 39, 83-93. doi: 10.1023/A:1006192225464
-
(1999)
Plant Mol. Biol
, vol.39
, pp. 83-93
-
-
Gallego, M.E.1
Sirand-Pugnet, P.2
White, C.I.3
-
8
-
-
0028483231
-
Efficient transformation of rice (Oryza sativa L.) mediated by Agrobacterium and sequence analysis of the boundaries of the T-DNA
-
Hiei, Y., Ohta, S., Komari, T., and Kumashiro, T. (1994). Efficient transformation of rice (Oryza sativa L.) mediated by Agrobacterium and sequence analysis of the boundaries of the T-DNA. Plant J. 6, 271-282. doi: 10.1046/j.1365-313X.1994.6020271.x
-
(1994)
Plant J
, vol.6
, pp. 271-282
-
-
Hiei, Y.1
Ohta, S.2
Komari, T.3
Kumashiro, T.4
-
9
-
-
1842764873
-
Atale of two integrations, transgene and T-DNA:Gene targetingbyhomologousrecombinationinrice
-
Iida, S., and Terada, R. (2004).Atale of two integrations, transgene and T-DNA:gene targetingbyhomologousrecombinationinrice. Curr. Opin. Biotechnol. 15,132138. doi: 10.1016/j.copbio.2004.02.005
-
(2004)
Curr. Opin. Biotechnol
, vol.15
-
-
Iida, S.1
Terada, R.2
-
10
-
-
26444579290
-
Modification of endogenous natural genes bygene targeting in rice and other higher plants
-
Iida, S., and Terada, R. (2005). Modification of endogenous natural genes bygene targeting in rice and other higher plants. Plant Mol. Biol. 59, 205-219. doi: 10.1007/s11103-005-2162-x
-
(2005)
Plant Mol. Biol
, vol.59
, pp. 205-219
-
-
Iida, S.1
Terada, R.2
-
11
-
-
0029786846
-
Targeted transgenesis
-
Jasin, M., Moynahan, M. E., and Richardson, C. (1996). Targeted transgenesis. Proc. Natl. Acad. Sci. U.S.A. 93, 8804-8808. doi: 10.1073/pnas.93.17.8804
-
(1996)
Proc. Natl. Acad. Sci. U.S.A
, vol.93
, pp. 8804-8808
-
-
Jasin, M.1
Moynahan, M.E.2
Richardson, C.3
-
12
-
-
49249114175
-
Efficient transfer of base changes fromavector to therice genome byhomologous recombination: Involvement of heteroduplex formation and mismatch correction
-
Johzuka-Hisatomi, Y., Terada, R., and Iida, S. (2008). Efficient transfer of base changes fromavector to therice genome byhomologous recombination: involvement of heteroduplex formation and mismatch correction. NucleicAcids Res. 36, 4727-4735. doi: 10.1093/nar/gkn451
-
(2008)
Nucleicacids Res
, vol.36
, pp. 4727-4735
-
-
Johzuka-Hisatomi, Y.1
Terada, R.2
Iida, S.3
-
13
-
-
27244444230
-
The plant VirE2 interacting protein 1. A molecular link between the Agrobacterium T-complex and the host cell chromatin?
-
Loyter, A., Rosenbluh, J., Zakai, N., Li, J., Kozlovsky, S.V., Tzfira, T., et al. (2005). The plant VirE2 interacting protein 1. A molecular link between the Agrobacterium T-complex and the host cell chromatin? Plant Physiol. 138, 1318-1321. doi: 10.1104/pp.105.062547
-
(2005)
Plant Physiol
, vol.138
, pp. 1318-1321
-
-
Loyter, A.1
Rosenbluh, J.2
Zakai, N.3
Li, J.4
Kozlovsky, S.V.5
Tzfira, T.6
-
14
-
-
3142668353
-
Alanine-scanning mutagenesis reveals a cytosine deaminase mutant with alteredsubstrate preference
-
Mahan, S. D., Ireton, G. C., Stoddard, B. L., and Black, M. E. (2004). Alanine-scanning mutagenesis reveals a cytosine deaminase mutant with alteredsubstrate preference. Biochemistry 43, 8957-8964. doi: 10.1021/bi049720z
-
(2004)
Biochemistry
, vol.43
, pp. 8957-8964
-
-
Mahan, S.D.1
Ireton, G.C.2
Stoddard, B.L.3
Black, M.E.4
-
15
-
-
0024296027
-
Disruption of the proto-oncogene int-2 in mouse embryo-derived stem cells: A general strategy for targeting mutations to non-selectable genes
-
Mansour, S. L., Thomas, K. R., and Capecchi, M. R. (1988). Disruption of the proto-oncogene int-2 in mouse embryo-derived stem cells: a general strategy for targeting mutations to non-selectable genes. Nature 336, 348-352. doi: 10.1038/336348a0
-
(1988)
Nature
, vol.336
, pp. 348-352
-
-
Mansour, S.L.1
Thomas, K.R.2
Capecchi, M.R.3
-
16
-
-
84862580050
-
Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation
-
Moritoh, S., Eun, C. H., Ono, A., Asao, H., Okano, Y., Yamaguchi, K., etal. (2012). Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation. Plant J. 71, 85-98. doi: 10.1111/j.1365-313X.2012.04974.x
-
(2012)
Plant J
, vol.71
, pp. 85-98
-
-
Moritoh, S.1
Eun, C.H.2
Ono, A.3
Asao, H.4
Okano, Y.5
Yamaguchi, K.6
-
17
-
-
84893705393
-
Precise marker excision system using an animal-derived piggyBac transposon in plants
-
Nishizawa-Yokoi, A., Endo, M., Osakabe, K., Saika, H., and Toki, S. (2014a). Precise marker excision system using an animal-derived piggyBac transposon in plants. PlantJ. 77, 454-463. doi: 10.1111/tpj.12367
-
(2014)
Plantj
, vol.77
, pp. 454-463
-
-
Nishizawa-Yokoi, A.1
Endo, M.2
Osakabe, K.3
Saika, H.4
Toki, S.5
-
18
-
-
84920157052
-
Precision genome editing in plants via gene targeting and piggyBac-mediated marker excision
-
Epubaheadofprint
-
Nishizawa-Yokoi, A., Endo, M., Ohtsuki, N., Saika, H., and Toki, S. (2014b). Precision genome editing in plants via gene targeting and piggyBac-mediated marker excision. PlantJ. doi: 10.1111/tpj.12693[Epubaheadofprint].
-
(2014)
Plantj
-
-
Nishizawa-Yokoi, A.1
Endo, M.2
Ohtsuki, N.3
Saika, H.4
Toki, S.5
-
19
-
-
2442552190
-
Gene targeting in plants
-
in Gene Targeting, ed., Boca Raton, FL: CRC Press
-
Offringa, R., and Hooykaas, P. (1995) “Gene targeting in plants,” in Gene Targeting, ed. M. A. Vega (Boca Raton, FL: CRC Press), 84-121.
-
(1995)
M. A. Vega
, pp. 84-121
-
-
Offringa, R.1
Hooykaas, P.2
-
20
-
-
84864617168
-
A null mutation of ROS1a for DNA demethylation in rice is not transmittable to progeny
-
Ono, A., Yamaguchi, K., Fukada-Tanaka, S., Terada, R., Mitsui, T., and Iida, S. A null mutation of ROS1a for DNA demethylation in rice is not transmittable to progeny. PlantJ. 71, 564-574. doi: 10.1111/j.1365-313X.2012.05009.x
-
Plantj
, vol.71
, pp. 564-574
-
-
Ono, A.1
Yamaguchi, K.2
Fukada-Tanaka, S.3
Terada, R.4
Mitsui, T.5
Iida, S.6
-
21
-
-
0035895284
-
K. (2001). Essential role of the small GTPase Rac in disease resistance of rice
-
Ono, E., Wong, H. L., Kawasaki, T., Hasegawa, M., Kodama, O., and Shi- mamoto, K. (2001). Essential role of the small GTPase Rac in disease resistance of rice. Natl. Acad. Sci. U.S.A. 98, 759-764. doi: 10.1073/pnas.98.2.759
-
Natl. Acad. Sci. U.S.A
, vol.98
, pp. 759-764
-
-
Ono, E.1
Wong, H.L.2
Kawasaki, T.3
Hasegawa, M.4
Kodama, O.5
Shi-Mamoto, K.6
-
22
-
-
84899064952
-
A mutated cytosine deaminase gene, codA (D314a), as an efficient negative selection marker for gene targeting in rice
-
Osakabe, K., Nishizawa-Yokoi, A., Ohtsuki, N., Osakabe, Y., and Toki, S. (2014). A mutated cytosine deaminase gene, codA (d314a), as an efficient negative selection marker for gene targeting in rice. Plant Cell Physiol. 55, 658-665. doi: 10.1093/pcp/pct183
-
(2014)
Plant Cell Physiol
, vol.55
, pp. 658-665
-
-
Osakabe, K.1
Nishizawa-Yokoi, A.2
Ohtsuki, N.3
Osakabe, Y.4
Toki, S.5
-
23
-
-
84859781058
-
Development of an efficient Agrobacterium-mediated gene targeting system for rice and analysis of rice knockouts laking Granule-bound starch synthase (Waxy) and ^1,2-Xylosyltransferase
-
Ozawa, K., Wakasa, Y., Ogo, Y., Matsuo, K., Kawahigashi, H., and Takaiwa, F. (2012). Development of an efficient Agrobacterium-mediated gene targeting system for rice and analysis of rice knockouts laking Granule-bound starch synthase (waxy) and ^1,2-Xylosyltransferase. Plant Cell Physiol. 53, 755-761. doi: 10.1093/pcp/pcs016
-
(2012)
Plant Cell Physiol
, vol.53
, pp. 755-761
-
-
Ozawa, K.1
Wakasa, Y.2
Ogo, Y.3
Matsuo, K.4
Kawahigashi, H.5
Takaiwa, F.6
-
24
-
-
0017620769
-
Diphtheria toxin
-
Pappenheimer, A. M. (1977). Diphtheria toxin. Annu. Rev. Biochem. 46, 69-94. doi: 10.1146/annurev.bi.46.070177.000441
-
(1977)
Annu. Rev. Biochem
, vol.46
, pp. 69-94
-
-
Pappenheimer, A.M.1
-
25
-
-
0000976249
-
Gene targeting in plants
-
Paszkowski, J., Baur, M., Bogucki, A., and Potrykus, I. (1988). Gene targeting in plants. EMBO J. 7, 4021-4026. doi: 10.1387/ijdb.130194hp
-
(1988)
EMBO J
, vol.7
, pp. 4021-4026
-
-
Paszkowski, J.1
Baur, M.2
Bogucki, A.3
Potrykus, I.4
-
26
-
-
0032779205
-
Double-strand break-induced recombination between ectopic homologous sequences in somatic plant cells
-
Puchta, H. (1999). Double-strand break-induced recombination between ectopic homologous sequences in somatic plant cells. Genetics 152, 1173-1181.
-
(1999)
Genetics
, vol.152
, pp. 1173-1181
-
-
Puchta, H.1
-
27
-
-
84901386271
-
Synthetic nucleases for genome engineering in plants: Prospects for a bright future
-
Puchta, H., and Fauser, F. (2014). Synthetic nucleases for genome engineering in plants: prospects for a bright future. Plant J. 78, 727-741. doi: 10.1111/tpj.12338
-
(2014)
Plant J
, vol.78
, pp. 727-741
-
-
Puchta, H.1
Fauser, F.2
-
28
-
-
24744454355
-
High-frequency gene targeting in Arabidopsis plants expressing the yeast RAD54 gene
-
Shaked, H., Melamed-Bessudo, C., and Levy, A. A. (2005). High-frequency gene targeting in Arabidopsis plants expressing the yeast RAD54 gene. Proc. Natl. Acad. Sci. U.S.A. 102,12265-12269. doi: 10.1073/pnas.0502601102
-
(2005)
Proc. Natl. Acad. Sci. U.S.A
, vol.102
, pp. 12265-12269
-
-
Shaked, H.1
Melamed-Bessudo, C.2
Levy, A.A.3
-
29
-
-
66249147273
-
Precise genome modification in the crop species Zea mays using zinc-finger nucleases
-
Shukla, V. K., Doyon, Y., Miller, J. C., DeKelver, R. C., Moehle, E. A., Worden, S. E., etal. (2009). Precise genome modification in the crop species Zea mays using zinc-finger nucleases. Nature 459, 437-441. doi: 10.1038/nature07992
-
(2009)
Nature
, vol.459
, pp. 437-441
-
-
Shukla, V.K.1
Doyon, Y.2
Miller, J.C.3
Dekelver, R.C.4
Moehle, E.A.5
Worden, S.E.6
-
30
-
-
0034084963
-
The complete sequence of 340 kb of DNA around the rice Adh1-Adh2 region reveals interrupted co linearity with maize chromosome 4
-
Tarchini, R., Biddle, P., Wineland, R., Tingey, S., and Rafalski, A. (2000). The complete sequence of 340 kb of DNA around the rice Adh1-Adh2 region reveals interrupted co linearity with maize chromosome 4. Plant Cell 12, 381-391. doi: 10.1105/tpc.12.3.381
-
(2000)
Plant Cell
, vol.12
, pp. 381-391
-
-
Tarchini, R.1
Biddle, P.2
Wineland, R.3
Tingey, S.4
Rafalski, A.5
-
31
-
-
1842720144
-
A large-scale Agrobacterium-mediated transformation procedure with a strong positive-negative selection for gene targeting in rice (Oryza sativa L.)
-
Terada, R., Asao, H., and Iida, S. (2004). A large-scale Agrobacterium-mediated transformation procedure with a strong positive-negative selection for gene targeting in rice (Oryza sativa L.). Plant Cell Rep. 22, 653-659. doi: 10.1007/s00299-003-0752-0
-
(2004)
Plant Cell Rep
, vol.22
, pp. 653-659
-
-
Terada, R.1
Asao, H.2
Iida, S.3
-
32
-
-
34250620130
-
Gene targeting by homologous recombination as a biotechnological tool for rice functional genomics
-
Terada, R., Johzuka-Hisatomi, Y., Saitoh, M., Asao, H., and Iida, S. (2007) Gene targeting by homologous recombination as a biotechnological tool for rice functional genomics. Plant Physiol. 144, 846-856. doi: 10.1104/pp.107.095992
-
(2007)
Plant Physiol
, vol.144
, pp. 846-856
-
-
Terada, R.1
Johzuka-Hisatomi, Y.2
Saitoh, M.3
Asao, H.4
Iida, S.5
-
33
-
-
77952908766
-
Cre-lox mediated marker elimination and gene reactivation at waxy locus created in the rice genome based on strong positive-negative selection
-
Terada, R., Nagahara, M., Furukawa, K., Shimamoto, M., Yamaguchi, K., and Iida, S.. Cre-lox mediated marker elimination and gene reactivation at waxy locus created in the rice genome based on strong positive-negative selection. Plant Biotechnol. 27, 29-37. doi: 10.5511/plantbiotechnology.27.29
-
Plant Biotechnol
, vol.27
, pp. 29-37
-
-
Terada, R.1
Nagahara, M.2
Furukawa, K.3
Shimamoto, M.4
Yamaguchi, K.5
Iida, S.6
-
34
-
-
0036787546
-
Efficient gene targeting by homologous recombination in rice
-
Terada, R., Urawa, H., Inagaki, Y., Tsugane, K., and Iida, S. (2002). Efficient gene targeting by homologous recombination in rice. Nat. Biotechnol. 20, 1030-1034. doi: 10.1038/nbt737
-
(2002)
Nat. Biotechnol
, vol.20
, pp. 1030-1034
-
-
Terada, R.1
Urawa, H.2
Inagaki, Y.3
Tsugane, K.4
Iida, S.5
-
35
-
-
0031282664
-
Gene targeting approaches using positive- negative selection and large flanking regions
-
Thykjaer, T., Finnemann, J., Schauser, L., Christensen, L., Poulsen, C., and Stougaard, J. (1997). Gene targeting approaches using positive- negative selection and large flanking regions. Plant Mol. Biol. 35, 523-530. doi: 10.1023/A:1005865600319
-
(1997)
Plant Mol. Biol
, vol.35
, pp. 523-530
-
-
Thykjaer, T.1
Finnemann, J.2
Schauser, L.3
Christensen, L.4
Poulsen, C.5
Stougaard, J.6
-
36
-
-
0035844993
-
Positive-Negative selection for homologous recombination in Arabidopsis
-
Wang, H. X., Viret, J.-F., Eldridge, A., Perera, R., Signer, E. R., and Chiu- razzi, M. (2001). Positive-Negative selection for homologous recombination in Arabidopsis. Gene 272,249-255. doi: 10.1016/S0378-1119(01)00532-7
-
(2001)
Gene
, vol.272
, pp. 249-255
-
-
Wang, H.X.1
Viret, J.-F.2
Eldridge, A.3
Perera, R.4
Signer, E.R.5
Chiu-Razzi, M.6
-
37
-
-
70349868188
-
Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice
-
Yamauchi, T., Johzuka-Hisatomi, Y., Fukada-Tanaka, S., Terada, R., Nakamura, I., and Iida, S. (2009). Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice. Plant J. 60, 386-396. doi: 10.1111/j.1365-313X.2009.03947.x
-
(2009)
Plant J
, vol.60
, pp. 386-396
-
-
Yamauchi, T.1
Johzuka-Hisatomi, Y.2
Fukada-Tanaka, S.3
Terada, R.4
Nakamura, I.5
Iida, S.6
-
38
-
-
84900872783
-
The MET1b gene encoding a maintenance DNA methyltransferase is indispensable for normal development in rice
-
Yamauchi, T., Johzuka-Hisatomi, Y., Terada, R., Nakamura, I., and Iida, S. (2014). The MET1b gene encoding a maintenance DNA methyltransferase is indispensable for normal development in rice. Plant Mol. Biol. 85, 219-232. doi: 10.1007/s11103-014-0178-9
-
(2014)
Plant Mol. Biol
, vol.85
, pp. 219-232
-
-
Yamauchi, T.1
Johzuka-Hisatomi, Y.2
Terada, R.3
Nakamura, I.4
Iida, S.5
-
39
-
-
79952138028
-
A hyperactive piggyBac transposase for mammalian applications
-
Yusa, K., Zhou, L., Li, M., Bradley, A., and Craig, N. (2011). A hyperactive piggyBac transposase for mammalian applications. Proc. Natl. Acad. Sci. U.S.A. 108, 1531—1536. doi: 10.1073/pnas.1008322108
-
(2011)
Proc. Natl. Acad. Sci. U.S.A
, vol.108
, pp. 1531-1536
-
-
Yusa, K.1
Zhou, L.2
Li, M.3
Bradley, A.4
Craig, N.5
-
40
-
-
85042815594
-
Targeted genome modification of crop plants using a CRISPR-Cas system
-
Zhang, Q., Wang, Y., Li, J., Zhang, Y., Chen, K., Liang, Z., etal. (2013). Targeted genome modification of crop plants using a CRISPR-Cas system. Nat. Biotechnol. 31, 687-688. doi: 10.1038/nbt.2650
-
(2013)
Nat. Biotechnol
, vol.31
, pp. 687-688
-
-
Zhang, Q.1
Wang, Y.2
Li, J.3
Zhang, Y.4
Chen, K.5
Liang, Z.6
|