-
1
-
-
3142664643
-
The evolution of modern eukaryotic phytoplankton
-
Falkowski PG, Katz ME, Knoll AH, Quigg A, Raven JA, Schofield O, Taylor FJ. The evolution of modern eukaryotic phytoplankton. Science. 2004;305:354–360. doi: 10.1126/science.1095964
-
(2004)
Science
, vol.305
, pp. 354-360
-
-
Falkowski, P.G.1
Katz, M.E.2
Knoll, A.H.3
Quigg, A.4
Raven, J.A.5
Schofield, O.6
Taylor, F.J.7
-
2
-
-
84866747578
-
Diversity and ecology of eukaryotic marine phytoplankton
-
Not F, Siano R, Kooistra WHCF, Simon N, Vaulot D, Probert I. Diversity and ecology of eukaryotic marine phytoplankton. Adv Bot Res. 2012;64:1–53. doi: 10.1016/B978-0-12-391499-6.00001-3
-
(2012)
Adv Bot Res
, vol.64
, pp. 1-53
-
-
Not, F.1
Siano, R.2
Kooistra, W.H.C.F.3
Simon, N.4
Vaulot, D.5
Probert, I.6
-
3
-
-
0038719130
-
Molecular techniques in phytoplankton research: from allozyme electrophoresis to genomics
-
de Bruin A, Ibelings BW, Van Donk E. Molecular techniques in phytoplankton research: from allozyme electrophoresis to genomics. Hydrobiologia. 2003;491:47–63. doi: 10.1023/A:1024473620792
-
(2003)
Hydrobiologia
, vol.491
, pp. 47-63
-
-
de Bruin, A.1
Ibelings, B.W.2
Van Donk, E.3
-
4
-
-
80051689273
-
Methods to estimate the diversity in the marine photosynthetic protist community with illustrations from case studies: a review
-
Medlin LK, Kooistra WHCF. Methods to estimate the diversity in the marine photosynthetic protist community with illustrations from case studies: a review. Diversity. 2010;2:973–1014. doi: 10.3390/d2070973
-
(2010)
Diversity
, vol.2
, pp. 973-1014
-
-
Medlin, L.K.1
Kooistra, W.H.C.F.2
-
5
-
-
71249094329
-
Eukaryotic diversity and phylogeny using small- and large-subunit ribosomal RNA genes from environmental samples
-
Marande W, López-García P, Moreira D. Eukaryotic diversity and phylogeny using small- and large-subunit ribosomal RNA genes from environmental samples. Environ Microbiol. 2009;11:3179–3188. doi: 10.1111/j.1462-2920.2009.02023.x
-
(2009)
Environ Microbiol
, vol.11
, pp. 3179-3188
-
-
Marande, W.1
López-García, P.2
Moreira, D.3
-
6
-
-
79957979297
-
Barcoding diatoms: exploring alternatives to COI-5P
-
Hamsher SE, Evans KM, Mann DG, Poulíčková A, Saunders GW. Barcoding diatoms: exploring alternatives to COI-5P. Protist. 2011;162:405–422. doi: 10.1016/j.protis.2010.09.005
-
(2011)
Protist
, vol.162
, pp. 405-422
-
-
Hamsher, S.E.1
Evans, K.M.2
Mann, D.G.3
Poulíčková, A.4
Saunders, G.W.5
-
7
-
-
84865089175
-
Evaluating the ribosomal Internal Transcribed Spacer (ITS) as a candidate dinoflagellate barcode marker
-
Stern RF, Andersen RA, Jameson I, Kupper FC, Coffroth MA, Vaulot D, Le Gall F, Veron B, Brand JJ, Skelton H, Kasai F, Lilly EL, Keeling PJ. Evaluating the ribosomal Internal Transcribed Spacer (ITS) as a candidate dinoflagellate barcode marker. PLoS ONE. 2012;7:e42780. doi: 10.1371/journal.pone.0042780
-
(2012)
PLoS ONE
, vol.7
, pp. 42780
-
-
Stern, R.F.1
Andersen, R.A.2
Jameson, I.3
Kupper, F.C.4
Coffroth, M.A.5
Vaulot, D.6
Le Gall, F.7
Veron, B.8
Brand, J.J.9
Skelton, H.10
Kasai, F.11
Lilly, E.L.12
Keeling, P.J.13
-
8
-
-
79851504956
-
Microsatellite primers in the planktonic diatom Pseudo-nitzschia multistriata (Bacillariophyceae
-
Tesson SV, Borra M, Kooistra WHCF, Procaccini G. Microsatellite primers in the planktonic diatom Pseudo-nitzschia multistriata (Bacillariophyceae). Am J Bot. 2011;98:e33–35. doi: 10.3732/ajb.1000430
-
(2011)
Am J Bot
, vol.98
, pp. 33-35
-
-
Tesson, S.V.1
Borra, M.2
Kooistra, W.H.C.F.3
Procaccini, G.4
-
9
-
-
13944265304
-
Diversity in the genus Skeletonema (Bacillariophyceae). Bacillariophyceae II. An assessment of the taxonomy of S. costatum-like species with the description of four new species
-
Sarno D, Kooistra WCHF, Medlin LK, Percopo I, Zingone A. Diversity in the genus Skeletonema (Bacillariophyceae). Bacillariophyceae II. An assessment of the taxonomy of S. costatum-like species with the description of four new species. J Phycol. 2005;41:151–176. doi: 10.1111/j.1529-8817.2005.04067.x
-
(2005)
J Phycol
, vol.41
, pp. 151-176
-
-
Sarno, D.1
Kooistra, W.C.H.F.2
Medlin, L.K.3
Percopo, I.4
Zingone, A.5
-
10
-
-
33846921368
-
Diversity in the genus Skeletonema (Bacillariophyceae): III. Phylogenetic position and morphological variability of Skeletonema costatum and Skeletonema grevillei, with the description of Skeletonema ardens sp. nov
-
Sarno D, Koistra WHCF, Balzano S, Hargraves PE, Zingone A. Diversity in the genus Skeletonema (Bacillariophyceae): III. Phylogenetic position and morphological variability of Skeletonema costatum and Skeletonema grevillei, with the description of Skeletonema ardens sp. nov. J Phycol. 2007;43:156–170. doi: 10.1111/j.1529-8817.2006.00305.x
-
(2007)
J Phycol
, vol.43
, pp. 156-170
-
-
Sarno, D.1
Koistra, W.H.C.F.2
Balzano, S.3
Hargraves, P.E.4
Zingone, A.5
-
11
-
-
33947541485
-
Reproductive isolation among sympatric cryptic species in marine diatoms
-
Amato A, Kooistra WH, Ghiron JH, Mann DG, Pröschold T, Montresor M. Reproductive isolation among sympatric cryptic species in marine diatoms. Protist. 2007;158:193–207. doi: 10.1016/j.protis.2006.10.001
-
(2007)
Protist
, vol.158
, pp. 193-207
-
-
Amato, A.1
Kooistra, W.H.2
Ghiron, J.H.3
Mann, D.G.4
Pröschold, T.5
Montresor, M.6
-
12
-
-
0031805455
-
Identification and enumeration of cultured and wild Pseudo-nitzschia (Bacillariophyceae) using species-specific LSU rRNA-targeted fluorescent probes and filtered-based whole cell hybridization
-
Miller PE, Scholin CA. Identification and enumeration of cultured and wild Pseudo-nitzschia (Bacillariophyceae) using species-specific LSU rRNA-targeted fluorescent probes and filtered-based whole cell hybridization. J Phycol. 1998;34:371–382. doi: 10.1046/j.1529-8817.1998.340371.x
-
(1998)
J Phycol
, vol.34
, pp. 371-382
-
-
Miller, P.E.1
Scholin, C.A.2
-
13
-
-
0033857226
-
On detection of Pseudo-nitzschia Bacillariophyceae species using whole cell hybridization: sample fixation and stability
-
Miller PE, Scholin CA. On detection of Pseudo-nitzschia Bacillariophyceae species using whole cell hybridization: sample fixation and stability. J Phycol. 2000;36:238–250. doi: 10.1046/j.1529-8817.2000.99041.x
-
(2000)
J Phycol
, vol.36
, pp. 238-250
-
-
Miller, P.E.1
Scholin, C.A.2
-
14
-
-
84884702760
-
Strengths and weaknesses of microarray approaches to detect Pseudo-nitzschia species in the field
-
Barra L, Ruggiero MV, Sarno D, Montresor M, Kooistra WH. Strengths and weaknesses of microarray approaches to detect Pseudo-nitzschia species in the field. Environ Sci Pollut R. 2013;20:6705–6718. doi: 10.1007/s11356-012-1330-1
-
(2013)
Environ Sci Pollut R
, vol.20
, pp. 6705-6718
-
-
Barra, L.1
Ruggiero, M.V.2
Sarno, D.3
Montresor, M.4
Kooistra, W.H.5
-
15
-
-
79952303799
-
New approach using the real-time PCR method for estimation of the toxic marine dinoflagellate Ostreopsis cf. ovata in marine environment
-
Perini F, Casabianca A, Battocchi C, Accoroni S, Totti C, Penna A. New approach using the real-time PCR method for estimation of the toxic marine dinoflagellate Ostreopsis cf. ovata in marine environment. PLoS ONE. 2011;6:e17699. doi: 10.1371/journal.pone.0017699
-
(2011)
PLoS ONE
, vol.6
, pp. 17699
-
-
Perini, F.1
Casabianca, A.2
Battocchi, C.3
Accoroni, S.4
Totti, C.5
Penna, A.6
-
16
-
-
0032860385
-
Aptamers: an emerging class of molecules that rival antibodies in diagnostics
-
Jayasena SD. Aptamers: an emerging class of molecules that rival antibodies in diagnostics. Clin Chem 1999;45:1628–1650.
-
(1999)
Clin Chem
, vol.45
, pp. 1628-1650
-
-
Jayasena, S.D.1
-
17
-
-
33747164245
-
Aptamers come of age – at last
-
Bunka DH, Stockley PG. Aptamers come of age – at last. Nat Rev Microbiol. 2006;4:588–596. doi: 10.1038/nrmicro1458
-
(2006)
Nat Rev Microbiol
, vol.4
, pp. 588-596
-
-
Bunka, D.H.1
Stockley, P.G.2
-
18
-
-
77956876990
-
Targeting cancer cells with nucleic acid aptamers
-
Cerchia L, de Franciscis V. Targeting cancer cells with nucleic acid aptamers. Trends Biotechnol. 2010;28:517–525. doi: 10.1016/j.tibtech.2010.07.005
-
(2010)
Trends Biotechnol
, vol.28
, pp. 517-525
-
-
Cerchia, L.1
de Franciscis, V.2
-
20
-
-
0344690107
-
Combinatorial selection of high affinity RNA ligands to live African trypanosomes
-
Homann M, Göringer HU. Combinatorial selection of high affinity RNA ligands to live African trypanosomes. Nucleic Acids Res. 1999;27:2006–2014. doi: 10.1093/nar/27.9.2006
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 2006-2014
-
-
Homann, M.1
Göringer, H.U.2
-
21
-
-
0037036390
-
In vitro selection of RNA aptamers that bind to cell adhesion receptors of Trypanosoma cruzi and inhibit cell invasion
-
Ulrich H, Magdesian MH, Alves MJ, Colli W. In vitro selection of RNA aptamers that bind to cell adhesion receptors of Trypanosoma cruzi and inhibit cell invasion. J Biol Chem. 2002;277:20756–20762. doi: 10.1074/jbc.M111859200
-
(2002)
J Biol Chem
, vol.277
, pp. 20756-20762
-
-
Ulrich, H.1
Magdesian, M.H.2
Alves, M.J.3
Colli, W.4
-
22
-
-
38849155858
-
Identification of liver cancer-specific aptamers using whole live cells
-
Shangguan D, Meng L, Cao ZC, Xiao Z, Fang X, Li Y, Cardona D, Witek RP, Liu C, Tan W. Identification of liver cancer-specific aptamers using whole live cells. Anal Chem. 2008;80:721–728. doi: 10.1021/ac701962v
-
(2008)
Anal Chem
, vol.80
, pp. 721-728
-
-
Shangguan, D.1
Meng, L.2
Cao, Z.C.3
Xiao, Z.4
Fang, X.5
Li, Y.6
Cardona, D.7
Witek, R.P.8
Liu, C.9
Tan, W.10
-
23
-
-
0025194307
-
Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase
-
Tuerk C, Gold L. Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase. Science. 1990;249:505–510. doi: 10.1126/science.2200121
-
(1990)
Science
, vol.249
, pp. 505-510
-
-
Tuerk, C.1
Gold, L.2
-
24
-
-
0026575221
-
Selection of single-stranded DNA molecules that bind and inhibit human thrombin
-
Bock LC, Griffin LC, Latham JA, Vermaas EH, Toole JJ. Selection of single-stranded DNA molecules that bind and inhibit human thrombin. Nature. 1992;355:564–566. doi: 10.1038/355564a0
-
(1992)
Nature
, vol.355
, pp. 564-566
-
-
Bock, L.C.1
Griffin, L.C.2
Latham, J.A.3
Vermaas, E.H.4
Toole, J.J.5
-
25
-
-
77955551504
-
Selection and characterization of DNA aptamers with binding selectivity to Campylobacter jejuni using whole-cell SELEX
-
Dwivedi HP, Smiley RD, Jaykus LA. Selection and characterization of DNA aptamers with binding selectivity to Campylobacter jejuni using whole-cell SELEX. Appl Microbiol Biotechnol. 2010;87:2323–2334. doi: 10.1007/s00253-010-2728-7
-
(2010)
Appl Microbiol Biotechnol
, vol.87
, pp. 2323-2334
-
-
Dwivedi, H.P.1
Smiley, R.D.2
Jaykus, L.A.3
-
26
-
-
0035894040
-
Detection of human immunodeficiency virus type 1 reverse transcriptase using aptamers as probes in affinity capillary electrophoresis
-
Pavski V, Le XC. Detection of human immunodeficiency virus type 1 reverse transcriptase using aptamers as probes in affinity capillary electrophoresis. Anal Chem. 2001;73:6070–6076. doi: 10.1021/ac0107305
-
(2001)
Anal Chem
, vol.73
, pp. 6070-6076
-
-
Pavski, V.1
Le, X.C.2
-
27
-
-
0030001351
-
A SELEX primer
-
Fitzwater T, Polisky B. A SELEX primer. Methods Enzymol. 1996;267:275–301. doi: 10.1016/S0076-6879(96)67019-0
-
(1996)
Methods Enzymol
, vol.267
, pp. 275-301
-
-
Fitzwater, T.1
Polisky, B.2
-
28
-
-
84884982666
-
A reappraisal of the genus Leptocylindrus (Bacillariophyta), with the addition of three species and the erection of Tenuicylindrus gen
-
Nanjappa D, Kooistra WHCF, Zingone A. A reappraisal of the genus Leptocylindrus (Bacillariophyta), with the addition of three species and the erection of Tenuicylindrus gen. nov. J Phycol. 2013;49:917–936.
-
(2013)
nov. J Phycol
, vol.49
, pp. 917-936
-
-
Nanjappa, D.1
Kooistra, W.H.C.F.2
Zingone, A.3
-
29
-
-
84986764196
-
Media for the culture of oceanic ultraphytoplankton
-
Keller MD, Selvin RC, Claus W, Guillard RRL. Media for the culture of oceanic ultraphytoplankton. J Phycol. 1987;23:633–638. doi: 10.1111/j.1529-8817.1987.tb04217.x
-
(1987)
J Phycol
, vol.23
, pp. 633-638
-
-
Keller, M.D.1
Selvin, R.C.2
Claus, W.3
Guillard, R.R.L.4
-
30
-
-
80052441290
-
A neutralizing RNA aptamer against EGFR causes selective apoptotic cell death
-
Esposito CL, Passaro D, Longobardo I, Condorelli G, Marotta P, Affuso A, deFranciscis V, Cerchia L. A neutralizing RNA aptamer against EGFR causes selective apoptotic cell death. PLoS One. 2011;6(9):e24071. doi: 10.1371/journal.pone.0024071 doi: 10.1371/journal.pone.0024071
-
(2011)
PLoS One
, vol.6
, Issue.9
, pp. 24071
-
-
Esposito, C.L.1
Passaro, D.2
Longobardo, I.3
Condorelli, G.4
Marotta, P.5
Affuso, A.6
deFranciscis, V.7
Cerchia, L.8
-
31
-
-
0000075467
-
Improved free-energy parameters for predictions of RNA duplex stability
-
Freier SM, Kierzek R, Jaeger JA, Sugimoto N, Caruthers MH, Neilson T, Turner DH. Improved free-energy parameters for predictions of RNA duplex stability. Proc Natl Acad Sci USA. 1986;83:9373–9377. doi: 10.1073/pnas.83.24.9373
-
(1986)
Proc Natl Acad Sci USA
, vol.83
, pp. 9373-9377
-
-
Freier, S.M.1
Kierzek, R.2
Jaeger, J.A.3
Sugimoto, N.4
Caruthers, M.H.5
Neilson, T.6
Turner, D.H.7
-
33
-
-
84863018775
-
Aptamers and their biological applications
-
Song K-S, Lee S, Changill B. Aptamers and their biological applications. Sensors. 2012;12:612–631. doi:10.3390/s120100612 doi: 10.3390/s120100612
-
(2012)
Sensors
, vol.12
, pp. 612-631
-
-
Song, K.-S.1
Lee, S.2
Changill, B.3
-
34
-
-
0000211378
-
Role of sinking in diatom life-history cycles: ecological, evolutionary and geological significance
-
Smetacek VS. Role of sinking in diatom life-history cycles: ecological, evolutionary and geological significance. Mar Biol. 1985;84:239–251. doi: 10.1007/BF00392493
-
(1985)
Mar Biol
, vol.84
, pp. 239-251
-
-
Smetacek, V.S.1
-
35
-
-
84882505207
-
The origin and evolution of the diatoms: their adaptation to a planktonic existence
-
Kooistra WHCF, Gersonde R, Medlin LK, Mann DG. The origin and evolution of the diatoms: their adaptation to a planktonic existence. In: Falkowski PG, Knoll AH, editors. Evolution of primary producers in the sea. Burlington: Elsevier Academic Press; 2007. p. 207–249.
-
(2007)
Evolution of primary producers in the sea
, pp. 207-249
-
-
Kooistra, W.H.C.F.1
Gersonde, R.2
Medlin, L.K.3
Mann, D.G.4
-
36
-
-
84881188757
-
Planktonic diatoms and their environment in the lower Neretva River estuary (Eastern Adriatic Sea, NE Mediterranean
-
Jasprica N, Carić M, Kršinić F, Kapetanović T, Batistić M, Njire J. Planktonic diatoms and their environment in the lower Neretva River estuary (Eastern Adriatic Sea, NE Mediterranean). Nova Hedwigia. 2012;141:405–430.
-
(2012)
Nova Hedwigia
, vol.141
, pp. 405-430
-
-
Jasprica, N.1
Carić, M.2
Kršinić, F.3
Kapetanović, T.4
Batistić, M.5
Njire, J.6
-
37
-
-
3042833614
-
Seasonal patterns in plankton communities in a pluriannual time series at a coastal Mediterranean site (Gulf of Naples): an attempt to discern recurrences and trends
-
Ribera d'Alcalà M, Conversano F, Corato F, Licandro P, Mangoni O, Marino D, Mazzocchi MG, Modigh M, Montresor M, Nardella M, Saggiomo V, Sarno D, Zingone A. Seasonal patterns in plankton communities in a pluriannual time series at a coastal Mediterranean site (Gulf of Naples): an attempt to discern recurrences and trends. Scientia Marina. 2004;68:65–83. doi: 10.3989/scimar.2004.68s165
-
(2004)
Scientia Marina
, vol.68
, pp. 65-83
-
-
Ribera d'Alcalà, M.1
Conversano, F.2
Corato, F.3
Licandro, P.4
Mangoni, O.5
Marino, D.6
Mazzocchi, M.G.7
Modigh, M.8
Montresor, M.9
Nardella, M.10
Saggiomo, V.11
Sarno, D.12
Zingone, A.13
-
38
-
-
0028979366
-
Phytoplankton exudation: exploitation of the microbial loop as a defence against algal viruses
-
Murray AG. Phytoplankton exudation: exploitation of the microbial loop as a defence against algal viruses. J Plankton Res. 1995;17:1079–1094. doi: 10.1093/plankt/17.5.1079
-
(1995)
J Plankton Res
, vol.17
, pp. 1079-1094
-
-
Murray, A.G.1
-
39
-
-
33745008879
-
Pore architecture of diatom frustules: potential nanostructured membranes for molecular and particle separations
-
Losic D, Rosengarten G, Mitchell JG, Voelcker NH. Pore architecture of diatom frustules: potential nanostructured membranes for molecular and particle separations. J Nanosci Nanotechnol. 2006;6:982–989. doi: 10.1166/jnn.2006.174
-
(2006)
J Nanosci Nanotechnol
, vol.6
, pp. 982-989
-
-
Losic, D.1
Rosengarten, G.2
Mitchell, J.G.3
Voelcker, N.H.4
-
40
-
-
80055046240
-
Novel sex cells and evidence for sex pheromones in diatoms
-
Sato S, Beakes G, Idei M, Nagumo T, Mann DG. Novel sex cells and evidence for sex pheromones in diatoms. PloS one. 2011;6:e26923 doi: 10.1371/journal.pone.0026923
-
(2011)
PloS one
, vol.6
, pp. 26923
-
-
Sato, S.1
Beakes, G.2
Idei, M.3
Nagumo, T.4
Mann, D.G.5
-
41
-
-
84879306166
-
Positive selection within a diatom species acts on putative protein interactions and transcriptional regulation
-
Koester JA, Swanson WJ, Armbrust EV. Positive selection within a diatom species acts on putative protein interactions and transcriptional regulation. Mol Biol Evol. 2013;30:422–434. doi: 10.1093/molbev/mss242
-
(2013)
Mol Biol Evol
, vol.30
, pp. 422-434
-
-
Koester, J.A.1
Swanson, W.J.2
Armbrust, E.V.3
|