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Volumn 54, Issue 3, 2015, Pages 844-852

TtOmp85, a β-barrel assembly protein, functions by barrel augmentation

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; BIOLOGICAL MEMBRANES; LIPOSOMES; MEMBRANES;

EID: 84922031735     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi5011305     Document Type: Article
Times cited : (24)

References (42)
  • 1
    • 0041428149 scopus 로고    scopus 로고
    • The versatile β-barrel membrane protein
    • Wimley, W. C. (2003) The versatile β-barrel membrane protein Curr. Opin. Struct. Biol. 13, 404-411
    • (2003) Curr. Opin. Struct. Biol. , vol.13 , pp. 404-411
    • Wimley, W.C.1
  • 2
    • 0033586795 scopus 로고    scopus 로고
    • Outer membrane protein A of Escherichia coli inserts and folds into lipid bilayers by a concerted mechanism
    • Kleinschmidt, J. H., den, B. T., Driessen, A. J., and Tamm, L. K. (1999) Outer membrane protein A of Escherichia coli inserts and folds into lipid bilayers by a concerted mechanism Biochemistry 38, 5006-5016
    • (1999) Biochemistry , vol.38 , pp. 5006-5016
    • Kleinschmidt, J.H.1    Den, B.T.2    Driessen, A.J.3    Tamm, L.K.4
  • 3
    • 0037428132 scopus 로고    scopus 로고
    • Role of a highly conserved bacterial protein in outer membrane protein assembly
    • Voulhoux, R., Bos, M. P., Geurtsen, J., Mols, M., and Tommassen, J. (2003) Role of a highly conserved bacterial protein in outer membrane protein assembly Science 299, 262-265
    • (2003) Science , vol.299 , pp. 262-265
    • Voulhoux, R.1    Bos, M.P.2    Geurtsen, J.3    Mols, M.4    Tommassen, J.5
  • 4
    • 68949207040 scopus 로고    scopus 로고
    • Biogenesis of β-barrel membrane proteins in bacteria and eukaryotes: Evolutionary conservation and divergence
    • Walther, D. M., Rapaport, D., and Tommassen, J. (2009) Biogenesis of β-barrel membrane proteins in bacteria and eukaryotes: Evolutionary conservation and divergence Cell. Mol. Life Sci. 66, 2789-2804
    • (2009) Cell. Mol. Life Sci. , vol.66 , pp. 2789-2804
    • Walther, D.M.1    Rapaport, D.2    Tommassen, J.3
  • 5
    • 0025976068 scopus 로고
    • Carboxy-terminal phenylalanine is essential for the correct assembly of a bacterial outer membrane protein
    • Struyvé, M., Moons, M., and Tommassen, J. (1991) Carboxy-terminal phenylalanine is essential for the correct assembly of a bacterial outer membrane protein J. Mol. Biol. 218, 141-148
    • (1991) J. Mol. Biol. , vol.218 , pp. 141-148
    • Struyvé, M.1    Moons, M.2    Tommassen, J.3
  • 6
    • 58549093720 scopus 로고    scopus 로고
    • Crystal structure of a major outer membrane protein from Thermus thermophilus HB27
    • Brosig, A., Nesper, J., Boos, W., Welte, W., and Diederichs, K. (2009) Crystal structure of a major outer membrane protein from Thermus thermophilus HB27 J. Mol. Biol. 385, 1445-1455
    • (2009) J. Mol. Biol. , vol.385 , pp. 1445-1455
    • Brosig, A.1    Nesper, J.2    Boos, W.3    Welte, W.4    Diederichs, K.5
  • 7
    • 33751056360 scopus 로고    scopus 로고
    • Assembly factor Omp85 recognizes its outer membrane protein substrates by a species-specific C-terminal motif
    • Robert, V., Volokhina, E. B., Senf, F., Bos, M. P., Van, G. P., and Tommassen, J. (2006) Assembly factor Omp85 recognizes its outer membrane protein substrates by a species-specific C-terminal motif PLoS Biol. 4, e377
    • (2006) PLoS Biol. , vol.4 , pp. e377
    • Robert, V.1    Volokhina, E.B.2    Senf, F.3    Bos, M.P.4    Van, G.P.5    Tommassen, J.6
  • 9
    • 0642377467 scopus 로고    scopus 로고
    • POTRA: A conserved domain in the FtsQ family and a class of β-barrel outer membrane proteins
    • Sanchez-Pulido, L., Devos, D., Genevrois, S., Vicente, M., and Valencia, A. (2003) POTRA: A conserved domain in the FtsQ family and a class of β-barrel outer membrane proteins Trends Biochem. Sci. 28, 523-526
    • (2003) Trends Biochem. Sci. , vol.28 , pp. 523-526
    • Sanchez-Pulido, L.1    Devos, D.2    Genevrois, S.3    Vicente, M.4    Valencia, A.5
  • 10
    • 36749048640 scopus 로고    scopus 로고
    • Functioning of outer membrane protein assembly factor Omp85 requires a single POTRA domain
    • Bos, M. P., Robert, V., and Tommassen, J. (2007) Functioning of outer membrane protein assembly factor Omp85 requires a single POTRA domain EMBO Rep. 8, 1149-1154
    • (2007) EMBO Rep. , vol.8 , pp. 1149-1154
    • Bos, M.P.1    Robert, V.2    Tommassen, J.3
  • 14
    • 84868380649 scopus 로고    scopus 로고
    • The β-barrel assembly machinery (BAM) is required for the assembly of a primitive S-layer protein in the ancient outer membrane of Thermus thermophilus
    • Acosta, F., Ferreras, E., and Berenguer, J. (2012) The β-barrel assembly machinery (BAM) is required for the assembly of a primitive S-layer protein in the ancient outer membrane of Thermus thermophilus Extremophiles 16, 853-861
    • (2012) Extremophiles , vol.16 , pp. 853-861
    • Acosta, F.1    Ferreras, E.2    Berenguer, J.3
  • 15
    • 3242883431 scopus 로고    scopus 로고
    • PRED-TMBB: A web server for predicting the topology of β-barrel outer membrane proteins
    • Bagos, P. G., Liakopoulos, T. D., Spyropoulos, I. C., and Hamodrakas, S. J. (2004) PRED-TMBB: A web server for predicting the topology of β-barrel outer membrane proteins Nucleic Acids Res. 32, W400-W404
    • (2004) Nucleic Acids Res. , vol.32 , pp. W400-W404
    • Bagos, P.G.1    Liakopoulos, T.D.2    Spyropoulos, I.C.3    Hamodrakas, S.J.4
  • 16
    • 72449155682 scopus 로고    scopus 로고
    • Prediction of membrane spanning segments and topology in β-barrel membrane proteins at better accuracy
    • Ou, Y. Y., Chen, S. A., and Gromiha, M. M. (2010) Prediction of membrane spanning segments and topology in β-barrel membrane proteins at better accuracy J. Comput. Chem. 31, 217-223
    • (2010) J. Comput. Chem. , vol.31 , pp. 217-223
    • Ou, Y.Y.1    Chen, S.A.2    Gromiha, M.M.3
  • 18
    • 28444482763 scopus 로고    scopus 로고
    • Interstrand pairing patterns in β-barrel membrane proteins: The positive-outside rule, aromatic rescue, and strand registration prediction
    • Jackups, R., Jr. and Liang, J. (2005) Interstrand pairing patterns in β-barrel membrane proteins: The positive-outside rule, aromatic rescue, and strand registration prediction J. Mol. Biol. 354, 979-993
    • (2005) J. Mol. Biol. , vol.354 , pp. 979-993
    • Jackups, R.1    Liang, J.2
  • 19
    • 69149083388 scopus 로고    scopus 로고
    • Predicting weakly stable regions, oligomerization state, and protein-protein interfaces in transmembrane domains of outer membrane proteins
    • Naveed, H., Jackups, R., Jr., and Liang, J. (2009) Predicting weakly stable regions, oligomerization state, and protein-protein interfaces in transmembrane domains of outer membrane proteins Proc. Natl. Acad. Sci. U.S.A. 106, 12735-12740
    • (2009) Proc. Natl. Acad. Sci. U.S.A. , vol.106 , pp. 12735-12740
    • Naveed, H.1    Jackups, R.2    Liang, J.3
  • 20
    • 0029058159 scopus 로고
    • An analysis of side chain interactions and pair correlations within antiparallel β-sheets: The differences between backbone hydrogen-bonded and non-hydrogen-bonded residue pairs
    • Wouters, M. A. and Curmi, P. M. (1995) An analysis of side chain interactions and pair correlations within antiparallel β-sheets: The differences between backbone hydrogen-bonded and non-hydrogen-bonded residue pairs Proteins 22, 119-131
    • (1995) Proteins , vol.22 , pp. 119-131
    • Wouters, M.A.1    Curmi, P.M.2
  • 21
    • 46249120201 scopus 로고    scopus 로고
    • Expression, crystallization and preliminary X-ray analysis of an outer membrane protein from Thermus thermophilus HB27
    • Brosig, A., Nesper, J., Welte, W., and Diederichs, K. (2008) Expression, crystallization and preliminary X-ray analysis of an outer membrane protein from Thermus thermophilus HB27 Acta Crystallogr. F64, 533-536
    • (2008) Acta Crystallogr. , vol.F64 , pp. 533-536
    • Brosig, A.1    Nesper, J.2    Welte, W.3    Diederichs, K.4
  • 22
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli, U. K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4 Nature 227, 680-685
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 24
    • 36549072024 scopus 로고    scopus 로고
    • In vitro analysis of the bacterial twin-arginine-dependent protein export
    • Moser, M., Panahandeh, S., Holzapfel, E., and Müller, M. (2007) In vitro analysis of the bacterial twin-arginine-dependent protein export Methods Mol. Biol. 390, 63-79
    • (2007) Methods Mol. Biol. , vol.390 , pp. 63-79
    • Moser, M.1    Panahandeh, S.2    Holzapfel, E.3    Müller, M.4
  • 25
    • 84863418948 scopus 로고    scopus 로고
    • Two-partner secretion of Gram-negative bacteria: A single β-barrel protein enables transport across the outer membrane
    • Fan, E., Fiedler, S., Jacob-Dubuisson, F., and Müller, M. (2012) Two-partner secretion of Gram-negative bacteria: A single β-barrel protein enables transport across the outer membrane J. Biol. Chem. 287, 2591-2599
    • (2012) J. Biol. Chem. , vol.287 , pp. 2591-2599
    • Fan, E.1    Fiedler, S.2    Jacob-Dubuisson, F.3    Müller, M.4
  • 27
    • 0016350456 scopus 로고
    • Characterization of the major envelope protein from Escherichia coli. Regular arrangement on the peptidoglycan and unusual dodecyl sulfate binding
    • Rosenbusch, J. P. (1974) Characterization of the major envelope protein from Escherichia coli. Regular arrangement on the peptidoglycan and unusual dodecyl sulfate binding J. Biol. Chem. 249, 8019-8029
    • (1974) J. Biol. Chem. , vol.249 , pp. 8019-8029
    • Rosenbusch, J.P.1
  • 28
    • 77952894531 scopus 로고    scopus 로고
    • Omp85 from the thermophilic cyanobacterium Thermosynechococcus elongatus differs from proteobacterial Omp85 in structure and domain composition
    • Arnold, T., Zeth, K., and Linke, D. (2010) Omp85 from the thermophilic cyanobacterium Thermosynechococcus elongatus differs from proteobacterial Omp85 in structure and domain composition J. Biol. Chem. 285, 18003-18015
    • (2010) J. Biol. Chem. , vol.285 , pp. 18003-18015
    • Arnold, T.1    Zeth, K.2    Linke, D.3
  • 29
    • 33747874636 scopus 로고    scopus 로고
    • The structures of glycolipids isolated from the highly thermophilic bacterium Thermus thermophilus Samu-SA1
    • Leone, S., Molinaro, A., Lindner, B., Romano, I., Nicolaus, B., Parrilli, M., Lanzetta, R., and Holst, O. (2006) The structures of glycolipids isolated from the highly thermophilic bacterium Thermus thermophilus Samu-SA1 Glycobiology 16, 766-775
    • (2006) Glycobiology , vol.16 , pp. 766-775
    • Leone, S.1    Molinaro, A.2    Lindner, B.3    Romano, I.4    Nicolaus, B.5    Parrilli, M.6    Lanzetta, R.7    Holst, O.8
  • 30
    • 84861451226 scopus 로고    scopus 로고
    • The bacterial outer membrane β-barrel assembly machinery
    • Kim, K. H., Aulakh, S., and Paetzel, M. (2012) The bacterial outer membrane β-barrel assembly machinery Protein Sci. 21, 751-768
    • (2012) Protein Sci. , vol.21 , pp. 751-768
    • Kim, K.H.1    Aulakh, S.2    Paetzel, M.3
  • 31
    • 43449107064 scopus 로고    scopus 로고
    • Fold and function of polypeptide transport-associated domains responsible for delivering unfolded proteins to membranes
    • Knowles, T. J., Jeeves, M., Bobat, S., Dancea, F., McClelland, D., Palmer, T., Overduin, M., and Henderson, I. R. (2008) Fold and function of polypeptide transport-associated domains responsible for delivering unfolded proteins to membranes Mol. Microbiol. 68, 1216-1227
    • (2008) Mol. Microbiol. , vol.68 , pp. 1216-1227
    • Knowles, T.J.1    Jeeves, M.2    Bobat, S.3    Dancea, F.4    McClelland, D.5    Palmer, T.6    Overduin, M.7    Henderson, I.R.8
  • 32
    • 0036154083 scopus 로고    scopus 로고
    • Transport of maltodextrins through maltoporin: A single-channel study
    • Kullman, L., Winterhalter, M., and Bezrukov, S. M. (2002) Transport of maltodextrins through maltoporin: A single-channel study Biophys. J. 82, 803-812
    • (2002) Biophys. J. , vol.82 , pp. 803-812
    • Kullman, L.1    Winterhalter, M.2    Bezrukov, S.M.3
  • 34
    • 33746300776 scopus 로고    scopus 로고
    • Protein-protein interaction through β-strand addition
    • Remaut, H. and Waksman, G. (2006) Protein-protein interaction through β-strand addition Trends Biochem. Sci. 31, 436-444
    • (2006) Trends Biochem. Sci. , vol.31 , pp. 436-444
    • Remaut, H.1    Waksman, G.2
  • 35
    • 0030576521 scopus 로고    scopus 로고
    • Peptide-surface association: The case of PDZ and PTB domains
    • Harrison, S. C. (1996) Peptide-surface association: The case of PDZ and PTB domains Cell 86, 341-343
    • (1996) Cell , vol.86 , pp. 341-343
    • Harrison, S.C.1
  • 36
    • 13244255594 scopus 로고    scopus 로고
    • Crystal structure of a 92-residue C-terminal fragment of TonB from Escherichia coli reveals significant conformational changes compared to structures of smaller TonB fragments
    • Ködding, J., Killig, F., Polzer, P., Howard, S. P., Diederichs, K., and Welte, W. (2005) Crystal structure of a 92-residue C-terminal fragment of TonB from Escherichia coli reveals significant conformational changes compared to structures of smaller TonB fragments J. Biol. Chem. 280, 3022-3028
    • (2005) J. Biol. Chem. , vol.280 , pp. 3022-3028
    • Ködding, J.1    Killig, F.2    Polzer, P.3    Howard, S.P.4    Diederichs, K.5    Welte, W.6
  • 39
    • 33645883232 scopus 로고    scopus 로고
    • How hydrogen bonds shape membrane protein structure
    • White, S. H. (2006) How hydrogen bonds shape membrane protein structure Adv. Protein Chem. 72, 157-172
    • (2006) Adv. Protein Chem. , vol.72 , pp. 157-172
    • White, S.H.1
  • 40
    • 13244296604 scopus 로고    scopus 로고
    • Protein tagging and detection with engineered self-assembling fragments of green fluorescent protein
    • Cabantous, S., Terwilliger, T. C., and Waldo, G. S. (2005) Protein tagging and detection with engineered self-assembling fragments of green fluorescent protein Nat. Biotechnol. 23, 102-107
    • (2005) Nat. Biotechnol. , vol.23 , pp. 102-107
    • Cabantous, S.1    Terwilliger, T.C.2    Waldo, G.S.3
  • 41
    • 84861451226 scopus 로고    scopus 로고
    • The bacterial outer membrane β-barrel assembly machinery
    • Kim, K. H., Aulakh, S., and Paetzel, M. (2012) The bacterial outer membrane β-barrel assembly machinery Protein Sci. 21, 751-768
    • (2012) Protein Sci. , vol.21 , pp. 751-768
    • Kim, K.H.1    Aulakh, S.2    Paetzel, M.3
  • 42
    • 33750287565 scopus 로고    scopus 로고
    • Characterization of pores formed by YaeT (Omp85) from Escherichia coli
    • Stegmeier, J. F. and Andersen, C. (2006) Characterization of pores formed by YaeT (Omp85) from Escherichia coli J. Biochem. 140, 275-283
    • (2006) J. Biochem. , vol.140 , pp. 275-283
    • Stegmeier, J.F.1    Andersen, C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.