-
1
-
-
0041428149
-
The versatile β-barrel membrane protein
-
Wimley, W. C. (2003) The versatile β-barrel membrane protein Curr. Opin. Struct. Biol. 13, 404-411
-
(2003)
Curr. Opin. Struct. Biol.
, vol.13
, pp. 404-411
-
-
Wimley, W.C.1
-
2
-
-
0033586795
-
Outer membrane protein A of Escherichia coli inserts and folds into lipid bilayers by a concerted mechanism
-
Kleinschmidt, J. H., den, B. T., Driessen, A. J., and Tamm, L. K. (1999) Outer membrane protein A of Escherichia coli inserts and folds into lipid bilayers by a concerted mechanism Biochemistry 38, 5006-5016
-
(1999)
Biochemistry
, vol.38
, pp. 5006-5016
-
-
Kleinschmidt, J.H.1
Den, B.T.2
Driessen, A.J.3
Tamm, L.K.4
-
3
-
-
0037428132
-
Role of a highly conserved bacterial protein in outer membrane protein assembly
-
Voulhoux, R., Bos, M. P., Geurtsen, J., Mols, M., and Tommassen, J. (2003) Role of a highly conserved bacterial protein in outer membrane protein assembly Science 299, 262-265
-
(2003)
Science
, vol.299
, pp. 262-265
-
-
Voulhoux, R.1
Bos, M.P.2
Geurtsen, J.3
Mols, M.4
Tommassen, J.5
-
4
-
-
68949207040
-
Biogenesis of β-barrel membrane proteins in bacteria and eukaryotes: Evolutionary conservation and divergence
-
Walther, D. M., Rapaport, D., and Tommassen, J. (2009) Biogenesis of β-barrel membrane proteins in bacteria and eukaryotes: Evolutionary conservation and divergence Cell. Mol. Life Sci. 66, 2789-2804
-
(2009)
Cell. Mol. Life Sci.
, vol.66
, pp. 2789-2804
-
-
Walther, D.M.1
Rapaport, D.2
Tommassen, J.3
-
5
-
-
0025976068
-
Carboxy-terminal phenylalanine is essential for the correct assembly of a bacterial outer membrane protein
-
Struyvé, M., Moons, M., and Tommassen, J. (1991) Carboxy-terminal phenylalanine is essential for the correct assembly of a bacterial outer membrane protein J. Mol. Biol. 218, 141-148
-
(1991)
J. Mol. Biol.
, vol.218
, pp. 141-148
-
-
Struyvé, M.1
Moons, M.2
Tommassen, J.3
-
6
-
-
58549093720
-
Crystal structure of a major outer membrane protein from Thermus thermophilus HB27
-
Brosig, A., Nesper, J., Boos, W., Welte, W., and Diederichs, K. (2009) Crystal structure of a major outer membrane protein from Thermus thermophilus HB27 J. Mol. Biol. 385, 1445-1455
-
(2009)
J. Mol. Biol.
, vol.385
, pp. 1445-1455
-
-
Brosig, A.1
Nesper, J.2
Boos, W.3
Welte, W.4
Diederichs, K.5
-
7
-
-
33751056360
-
Assembly factor Omp85 recognizes its outer membrane protein substrates by a species-specific C-terminal motif
-
Robert, V., Volokhina, E. B., Senf, F., Bos, M. P., Van, G. P., and Tommassen, J. (2006) Assembly factor Omp85 recognizes its outer membrane protein substrates by a species-specific C-terminal motif PLoS Biol. 4, e377
-
(2006)
PLoS Biol.
, vol.4
, pp. e377
-
-
Robert, V.1
Volokhina, E.B.2
Senf, F.3
Bos, M.P.4
Van, G.P.5
Tommassen, J.6
-
8
-
-
70349464760
-
First structural insights into the TpsB/Omp85 superfamily
-
Jacob-Dubuisson, F., Villeret, V., Clantin, B., Delattre, A. S., and Saint, N. (2009) First structural insights into the TpsB/Omp85 superfamily Biol. Chem. 390, 675-684
-
(2009)
Biol. Chem.
, vol.390
, pp. 675-684
-
-
Jacob-Dubuisson, F.1
Villeret, V.2
Clantin, B.3
Delattre, A.S.4
Saint, N.5
-
9
-
-
0642377467
-
POTRA: A conserved domain in the FtsQ family and a class of β-barrel outer membrane proteins
-
Sanchez-Pulido, L., Devos, D., Genevrois, S., Vicente, M., and Valencia, A. (2003) POTRA: A conserved domain in the FtsQ family and a class of β-barrel outer membrane proteins Trends Biochem. Sci. 28, 523-526
-
(2003)
Trends Biochem. Sci.
, vol.28
, pp. 523-526
-
-
Sanchez-Pulido, L.1
Devos, D.2
Genevrois, S.3
Vicente, M.4
Valencia, A.5
-
10
-
-
36749048640
-
Functioning of outer membrane protein assembly factor Omp85 requires a single POTRA domain
-
Bos, M. P., Robert, V., and Tommassen, J. (2007) Functioning of outer membrane protein assembly factor Omp85 requires a single POTRA domain EMBO Rep. 8, 1149-1154
-
(2007)
EMBO Rep.
, vol.8
, pp. 1149-1154
-
-
Bos, M.P.1
Robert, V.2
Tommassen, J.3
-
11
-
-
84884419175
-
Structural insight into the biogenesis of β-barrel membrane proteins
-
Noinaj, N., Kuszak, A. J., Gumbart, J. C., Lukacik, P., Chang, H., Easley, N. C., Lithgow, T., and Buchanan, S. K. (2013) Structural insight into the biogenesis of β-barrel membrane proteins Nature 501, 385-390
-
(2013)
Nature
, vol.501
, pp. 385-390
-
-
Noinaj, N.1
Kuszak, A.J.2
Gumbart, J.C.3
Lukacik, P.4
Chang, H.5
Easley, N.C.6
Lithgow, T.7
Buchanan, S.K.8
-
12
-
-
84887430811
-
The structural basis of autotransporter translocation by TamA
-
Gruss, F., Zahringer, F., Jakob, R. P., Burmann, B. M., Hiller, S., and Maier, T. (2013) The structural basis of autotransporter translocation by TamA Nat. Struct. Mol. Biol. 20, 1318-1320
-
(2013)
Nat. Struct. Mol. Biol.
, vol.20
, pp. 1318-1320
-
-
Gruss, F.1
Zahringer, F.2
Jakob, R.P.3
Burmann, B.M.4
Hiller, S.5
Maier, T.6
-
13
-
-
46049116072
-
Omp85(Tt) from Thermus thermophilus HB27: An ancestral type of the Omp85 protein family
-
Nesper, J., Brosig, A., Ringler, P., Patel, G. J., Muller, S. A., Kleinschmidt, J. H., Boos, W., Diederichs, K., and Welte, W. (2008) Omp85(Tt) from Thermus thermophilus HB27: An ancestral type of the Omp85 protein family J. Bacteriol. 190, 4568-4575
-
(2008)
J. Bacteriol.
, vol.190
, pp. 4568-4575
-
-
Nesper, J.1
Brosig, A.2
Ringler, P.3
Patel, G.J.4
Muller, S.A.5
Kleinschmidt, J.H.6
Boos, W.7
Diederichs, K.8
Welte, W.9
-
14
-
-
84868380649
-
The β-barrel assembly machinery (BAM) is required for the assembly of a primitive S-layer protein in the ancient outer membrane of Thermus thermophilus
-
Acosta, F., Ferreras, E., and Berenguer, J. (2012) The β-barrel assembly machinery (BAM) is required for the assembly of a primitive S-layer protein in the ancient outer membrane of Thermus thermophilus Extremophiles 16, 853-861
-
(2012)
Extremophiles
, vol.16
, pp. 853-861
-
-
Acosta, F.1
Ferreras, E.2
Berenguer, J.3
-
15
-
-
3242883431
-
PRED-TMBB: A web server for predicting the topology of β-barrel outer membrane proteins
-
Bagos, P. G., Liakopoulos, T. D., Spyropoulos, I. C., and Hamodrakas, S. J. (2004) PRED-TMBB: A web server for predicting the topology of β-barrel outer membrane proteins Nucleic Acids Res. 32, W400-W404
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. W400-W404
-
-
Bagos, P.G.1
Liakopoulos, T.D.2
Spyropoulos, I.C.3
Hamodrakas, S.J.4
-
16
-
-
72449155682
-
Prediction of membrane spanning segments and topology in β-barrel membrane proteins at better accuracy
-
Ou, Y. Y., Chen, S. A., and Gromiha, M. M. (2010) Prediction of membrane spanning segments and topology in β-barrel membrane proteins at better accuracy J. Comput. Chem. 31, 217-223
-
(2010)
J. Comput. Chem.
, vol.31
, pp. 217-223
-
-
Ou, Y.Y.1
Chen, S.A.2
Gromiha, M.M.3
-
17
-
-
77954287478
-
Protein annotation and modelling servers at University College London
-
Buchan, D. W., Ward, S. M., Lobley, A. E., Nugent, T. C., Bryson, K., and Jones, D. T. (2010) Protein annotation and modelling servers at University College London Nucleic Acids Res. 38, W563-W568
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. W563-W568
-
-
Buchan, D.W.1
Ward, S.M.2
Lobley, A.E.3
Nugent, T.C.4
Bryson, K.5
Jones, D.T.6
-
18
-
-
28444482763
-
Interstrand pairing patterns in β-barrel membrane proteins: The positive-outside rule, aromatic rescue, and strand registration prediction
-
Jackups, R., Jr. and Liang, J. (2005) Interstrand pairing patterns in β-barrel membrane proteins: The positive-outside rule, aromatic rescue, and strand registration prediction J. Mol. Biol. 354, 979-993
-
(2005)
J. Mol. Biol.
, vol.354
, pp. 979-993
-
-
Jackups, R.1
Liang, J.2
-
19
-
-
69149083388
-
Predicting weakly stable regions, oligomerization state, and protein-protein interfaces in transmembrane domains of outer membrane proteins
-
Naveed, H., Jackups, R., Jr., and Liang, J. (2009) Predicting weakly stable regions, oligomerization state, and protein-protein interfaces in transmembrane domains of outer membrane proteins Proc. Natl. Acad. Sci. U.S.A. 106, 12735-12740
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 12735-12740
-
-
Naveed, H.1
Jackups, R.2
Liang, J.3
-
20
-
-
0029058159
-
An analysis of side chain interactions and pair correlations within antiparallel β-sheets: The differences between backbone hydrogen-bonded and non-hydrogen-bonded residue pairs
-
Wouters, M. A. and Curmi, P. M. (1995) An analysis of side chain interactions and pair correlations within antiparallel β-sheets: The differences between backbone hydrogen-bonded and non-hydrogen-bonded residue pairs Proteins 22, 119-131
-
(1995)
Proteins
, vol.22
, pp. 119-131
-
-
Wouters, M.A.1
Curmi, P.M.2
-
21
-
-
46249120201
-
Expression, crystallization and preliminary X-ray analysis of an outer membrane protein from Thermus thermophilus HB27
-
Brosig, A., Nesper, J., Welte, W., and Diederichs, K. (2008) Expression, crystallization and preliminary X-ray analysis of an outer membrane protein from Thermus thermophilus HB27 Acta Crystallogr. F64, 533-536
-
(2008)
Acta Crystallogr.
, vol.F64
, pp. 533-536
-
-
Brosig, A.1
Nesper, J.2
Welte, W.3
Diederichs, K.4
-
22
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli, U. K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4 Nature 227, 680-685
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
23
-
-
0022186670
-
Measurement of protein using bicinchoninic acid
-
Smith, P. K., Krohn, R. I., Hermanson, G. T., Mallia, A. K., Gartner, F. H., Provenzano, M. D., Fujimoto, E. K., Goeke, N. M., Olson, B. J., and Klenk, D. C. (1985) Measurement of protein using bicinchoninic acid Anal. Biochem. 150, 76-85
-
(1985)
Anal. Biochem.
, vol.150
, pp. 76-85
-
-
Smith, P.K.1
Krohn, R.I.2
Hermanson, G.T.3
Mallia, A.K.4
Gartner, F.H.5
Provenzano, M.D.6
Fujimoto, E.K.7
Goeke, N.M.8
Olson, B.J.9
Klenk, D.C.10
-
24
-
-
36549072024
-
In vitro analysis of the bacterial twin-arginine-dependent protein export
-
Moser, M., Panahandeh, S., Holzapfel, E., and Müller, M. (2007) In vitro analysis of the bacterial twin-arginine-dependent protein export Methods Mol. Biol. 390, 63-79
-
(2007)
Methods Mol. Biol.
, vol.390
, pp. 63-79
-
-
Moser, M.1
Panahandeh, S.2
Holzapfel, E.3
Müller, M.4
-
25
-
-
84863418948
-
Two-partner secretion of Gram-negative bacteria: A single β-barrel protein enables transport across the outer membrane
-
Fan, E., Fiedler, S., Jacob-Dubuisson, F., and Müller, M. (2012) Two-partner secretion of Gram-negative bacteria: A single β-barrel protein enables transport across the outer membrane J. Biol. Chem. 287, 2591-2599
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 2591-2599
-
-
Fan, E.1
Fiedler, S.2
Jacob-Dubuisson, F.3
Müller, M.4
-
26
-
-
0014055525
-
Electrical properties of bimolecular phospholipid membranes
-
Läuger, P., Lesslauer, W., Marti, E., and Richter, J. (1967) Electrical properties of bimolecular phospholipid membranes Biochim. Biophys. Acta 135, 20-32
-
(1967)
Biochim. Biophys. Acta
, vol.135
, pp. 20-32
-
-
Läuger, P.1
Lesslauer, W.2
Marti, E.3
Richter, J.4
-
27
-
-
0016350456
-
Characterization of the major envelope protein from Escherichia coli. Regular arrangement on the peptidoglycan and unusual dodecyl sulfate binding
-
Rosenbusch, J. P. (1974) Characterization of the major envelope protein from Escherichia coli. Regular arrangement on the peptidoglycan and unusual dodecyl sulfate binding J. Biol. Chem. 249, 8019-8029
-
(1974)
J. Biol. Chem.
, vol.249
, pp. 8019-8029
-
-
Rosenbusch, J.P.1
-
28
-
-
77952894531
-
Omp85 from the thermophilic cyanobacterium Thermosynechococcus elongatus differs from proteobacterial Omp85 in structure and domain composition
-
Arnold, T., Zeth, K., and Linke, D. (2010) Omp85 from the thermophilic cyanobacterium Thermosynechococcus elongatus differs from proteobacterial Omp85 in structure and domain composition J. Biol. Chem. 285, 18003-18015
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 18003-18015
-
-
Arnold, T.1
Zeth, K.2
Linke, D.3
-
29
-
-
33747874636
-
The structures of glycolipids isolated from the highly thermophilic bacterium Thermus thermophilus Samu-SA1
-
Leone, S., Molinaro, A., Lindner, B., Romano, I., Nicolaus, B., Parrilli, M., Lanzetta, R., and Holst, O. (2006) The structures of glycolipids isolated from the highly thermophilic bacterium Thermus thermophilus Samu-SA1 Glycobiology 16, 766-775
-
(2006)
Glycobiology
, vol.16
, pp. 766-775
-
-
Leone, S.1
Molinaro, A.2
Lindner, B.3
Romano, I.4
Nicolaus, B.5
Parrilli, M.6
Lanzetta, R.7
Holst, O.8
-
30
-
-
84861451226
-
The bacterial outer membrane β-barrel assembly machinery
-
Kim, K. H., Aulakh, S., and Paetzel, M. (2012) The bacterial outer membrane β-barrel assembly machinery Protein Sci. 21, 751-768
-
(2012)
Protein Sci.
, vol.21
, pp. 751-768
-
-
Kim, K.H.1
Aulakh, S.2
Paetzel, M.3
-
31
-
-
43449107064
-
Fold and function of polypeptide transport-associated domains responsible for delivering unfolded proteins to membranes
-
Knowles, T. J., Jeeves, M., Bobat, S., Dancea, F., McClelland, D., Palmer, T., Overduin, M., and Henderson, I. R. (2008) Fold and function of polypeptide transport-associated domains responsible for delivering unfolded proteins to membranes Mol. Microbiol. 68, 1216-1227
-
(2008)
Mol. Microbiol.
, vol.68
, pp. 1216-1227
-
-
Knowles, T.J.1
Jeeves, M.2
Bobat, S.3
Dancea, F.4
McClelland, D.5
Palmer, T.6
Overduin, M.7
Henderson, I.R.8
-
32
-
-
0036154083
-
Transport of maltodextrins through maltoporin: A single-channel study
-
Kullman, L., Winterhalter, M., and Bezrukov, S. M. (2002) Transport of maltodextrins through maltoporin: A single-channel study Biophys. J. 82, 803-812
-
(2002)
Biophys. J.
, vol.82
, pp. 803-812
-
-
Kullman, L.1
Winterhalter, M.2
Bezrukov, S.M.3
-
33
-
-
40749159588
-
Dissecting membrane insertion of mitochondrial β-barrel proteins
-
Kutik, S., Stojanovski, D., Becker, L., Becker, T., Meinecke, M., Kruger, V., Prinz, C., Meisinger, C., Guiard, B., Wagner, R., Pfanner, N., and Wiedemann, N. (2008) Dissecting membrane insertion of mitochondrial β-barrel proteins Cell 132, 1011-1024
-
(2008)
Cell
, vol.132
, pp. 1011-1024
-
-
Kutik, S.1
Stojanovski, D.2
Becker, L.3
Becker, T.4
Meinecke, M.5
Kruger, V.6
Prinz, C.7
Meisinger, C.8
Guiard, B.9
Wagner, R.10
Pfanner, N.11
Wiedemann, N.12
-
34
-
-
33746300776
-
Protein-protein interaction through β-strand addition
-
Remaut, H. and Waksman, G. (2006) Protein-protein interaction through β-strand addition Trends Biochem. Sci. 31, 436-444
-
(2006)
Trends Biochem. Sci.
, vol.31
, pp. 436-444
-
-
Remaut, H.1
Waksman, G.2
-
35
-
-
0030576521
-
Peptide-surface association: The case of PDZ and PTB domains
-
Harrison, S. C. (1996) Peptide-surface association: The case of PDZ and PTB domains Cell 86, 341-343
-
(1996)
Cell
, vol.86
, pp. 341-343
-
-
Harrison, S.C.1
-
36
-
-
13244255594
-
Crystal structure of a 92-residue C-terminal fragment of TonB from Escherichia coli reveals significant conformational changes compared to structures of smaller TonB fragments
-
Ködding, J., Killig, F., Polzer, P., Howard, S. P., Diederichs, K., and Welte, W. (2005) Crystal structure of a 92-residue C-terminal fragment of TonB from Escherichia coli reveals significant conformational changes compared to structures of smaller TonB fragments J. Biol. Chem. 280, 3022-3028
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 3022-3028
-
-
Ködding, J.1
Killig, F.2
Polzer, P.3
Howard, S.P.4
Diederichs, K.5
Welte, W.6
-
37
-
-
33947728761
-
Cooperative hydrogen bonding in amyloid formation
-
Tsemekhman, K., Goldschmidt, L., Eisenberg, D., and Baker, D. (2007) Cooperative hydrogen bonding in amyloid formation Protein Sci. 16, 761-764
-
(2007)
Protein Sci.
, vol.16
, pp. 761-764
-
-
Tsemekhman, K.1
Goldschmidt, L.2
Eisenberg, D.3
Baker, D.4
-
38
-
-
0032540234
-
Folding of β-sheet membrane proteins: A hydrophobic hexapeptide model
-
Wimley, W. C., Hristova, K., Ladokhin, A. S., Silvestro, L., Axelsen, P. H., and White, S. H. (1998) Folding of β-sheet membrane proteins: A hydrophobic hexapeptide model J. Mol. Biol. 277, 1091-1110
-
(1998)
J. Mol. Biol.
, vol.277
, pp. 1091-1110
-
-
Wimley, W.C.1
Hristova, K.2
Ladokhin, A.S.3
Silvestro, L.4
Axelsen, P.H.5
White, S.H.6
-
39
-
-
33645883232
-
How hydrogen bonds shape membrane protein structure
-
White, S. H. (2006) How hydrogen bonds shape membrane protein structure Adv. Protein Chem. 72, 157-172
-
(2006)
Adv. Protein Chem.
, vol.72
, pp. 157-172
-
-
White, S.H.1
-
40
-
-
13244296604
-
Protein tagging and detection with engineered self-assembling fragments of green fluorescent protein
-
Cabantous, S., Terwilliger, T. C., and Waldo, G. S. (2005) Protein tagging and detection with engineered self-assembling fragments of green fluorescent protein Nat. Biotechnol. 23, 102-107
-
(2005)
Nat. Biotechnol.
, vol.23
, pp. 102-107
-
-
Cabantous, S.1
Terwilliger, T.C.2
Waldo, G.S.3
-
41
-
-
84861451226
-
The bacterial outer membrane β-barrel assembly machinery
-
Kim, K. H., Aulakh, S., and Paetzel, M. (2012) The bacterial outer membrane β-barrel assembly machinery Protein Sci. 21, 751-768
-
(2012)
Protein Sci.
, vol.21
, pp. 751-768
-
-
Kim, K.H.1
Aulakh, S.2
Paetzel, M.3
-
42
-
-
33750287565
-
Characterization of pores formed by YaeT (Omp85) from Escherichia coli
-
Stegmeier, J. F. and Andersen, C. (2006) Characterization of pores formed by YaeT (Omp85) from Escherichia coli J. Biochem. 140, 275-283
-
(2006)
J. Biochem.
, vol.140
, pp. 275-283
-
-
Stegmeier, J.F.1
Andersen, C.2
|