Examining galectin binding specificity using glycan microarrays

Methods in Molecular Biology

Volumn 1207, Issue , 2015, Pages 115-131

  Arthur, Connie M ^a   Rodrigues, Lílian Cataldi ^a   Baruffi, Marcelo Dias ^a   Sullivan, Harold C ^a   Heimburg Molinaro, Jamie ^a   Smith, Dave F ^a   Cummings, Richard D ^a   Stowell, Sean R ^a  

^a NONE

Author keywords

Galectin; GBP glycan interactions; Glycan binding protein (GBP); Glycan microarray

Indexed keywords

BACTERIAL PROTEIN; GALECTIN; GLYCAN; POLYSACCHARIDE;

ARTICLE; BIOTINYLATION; CELL SURFACE; CONTROLLED STUDY; LECTIN BINDING; NONHUMAN; PRIORITY JOURNAL; PROTEIN CONTENT; PROTEIN MICROARRAY; WESTERN BLOTTING; ENZYME SPECIFICITY; METABOLISM; MICROARRAY ANALYSIS; PROCEDURES;

BIOTINYLATION; GALECTINS; MICROARRAY ANALYSIS; POLYSACCHARIDES; SUBSTRATE SPECIFICITY;

EID: 84921864050     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-1396-1_8     Document Type: Article

References (40)

1. Cerliani JP, Stowell SR, Mascanfroni ID, Arthur CM, Cummings RD, Rabinovich GA (2011) Expanding the universe of cytokines and pattern recognition receptors: galectins and glycans in innate immunity. J Clin Immunol 31(1):10–21. doi: 10.1007/s10875-010-9494-2
2. Cooper DN, Barondes SH (1999) God must love galectins; he made so many of them. Glycobiology 9(10):979–984
3. Brewer CF, Miceli MC, Baum LG (2002) Clusters, bundles, arrays and lattices: novel mechanisms for lectin-saccharide-mediated cellular interactions. Curr Opin Struct Biol 12(5): 616–623
4. Liu FT, Patterson RJ, Wang JL (2002) Intracellular functions of galectins. Biochim Biophys Acta 1572(2–3):263–273
5. Dias-Baruffi M, Stowell SR, Song SC, Arthur CM, Cho M, Rodrigues LC, Montes MA, Rossi MA, James JA, McEver RP, Cummings RD (2009) Differential expression of immunomodulatory galectin-1 in peripheral leukocytes and adult tissues and its cytosolic organization in striated muscle. Glycobiology 20(5):507–520
6. Nakahara S, Raz A (2006) On the role of galectins in signal transduction. Methods Enzymol 417:273–289. doi: 10.1016/S0076-6879(06)17019-6
7. van Kooyk Y, Rabinovich GA (2008) Proteinglycan interactions in the control of innate and adaptive immune responses. Nat Immunol 9(6):593–601. doi: 10.1038/ni.f.203
8. Cerri DG, Rodrigues LC, Stowell SR, Araujo DD, Coelho MC, Oliveira SR, Bizario JC, Cummings RD, Dias-Baruffi M, Costa MC (2008) Degeneration of dystrophic or injured skeletal muscles induces high expression of galectin-1. Glycobiology 18(11):842–850
9. Leffl er H, Carlsson S, Hedlund M, Qian Y, Poirier F (2004) Introduction to galectins. Glycoconj J 19(7–9):433–440. doi: 10.1023/ B:GLYC.0000014072.34840.04
10. Hirabayashi J, Hashidate T, Arata Y, Nishi N, Nakamura T, Hirashima M, Urashima T, Oka T, Futai M, Muller WE, Yagi F, Kasai K (2002) Oligosaccharide specifi city of galectins: a search by frontal affi nity chromatography. Biochim Biophys Acta 1572(2–3):232–254
11. Carlsson S, Oberg CT, Carlsson MC, Sundin A, Nilsson UJ, Smith D, Cummings RD, Almkvist J, Karlsson A, Leffl er H (2007) Affi nity of galectin-8 and its carbohydrate recognition domains for ligands in solution and at the cell surface. Glycobiology 17(6):663–676. doi: 10.1093/glycob/cwm026
12. Teichberg VI, Silman I, Beitsch DD, Resheff G (1975) A beta-D-galactoside binding protein from electric organ tissue of Electrophorus electricus. Proc Natl Acad Sci U S A 72(4): 1383–1387
13. Levi G, Teichberg VI (1981) Isolation and physicochemical characterization of electrolectin, a beta-D-galactoside binding lectin from the electric organ of Electrophorus electricus. J Biol Chem 256(11):5735–5740
14. de Waard A, Hickman S, Kornfeld S (1976) Isolation and properties of beta-galactoside binding lectins of calf heart and lung. J Biol Chem 251(23):7581–7587
15. Pritchett TJ, Brossmer R, Rose U, Paulson JC (1987) Recognition of monovalent sialosides by infl uenza virus H3 hemagglutinin. Virology 160(2):502–506
16. Stowell SR, Arthur CM, Mehta P, Slanina KA, Blixt O, Leffl er H, Smith DF, Cummings RD (2008) Galectin-1, -2, and -3 exhibit differential recognition of sialylated glycans and blood group antigens. J Biol Chem 283(15):10109–10123. doi: 10.1074/jbc. M709545200, M709545200[pii]
17. Ahmad N, Gabius HJ, Sabesan S, Oscarson S, Brewer CF (2004) Thermodynamic binding studies of bivalent oligosaccharides to galectin- 1, galectin-3, and the carbohydrate recognition domain of galectin-3. Glycobiology 14(9):817–825. doi: 10.1093/glycob/cwh095
18. Brewer CF (2004) Thermodynamic binding studies of galectin-1, -3 and -7. Glycoconj J 19(7–9):459–465. doi: 10.1023/B:GLYC.0000014075.62724.d0
19. Karmakar S, Stowell SR, Cummings RD, McEver RP (2008) Galectin-1 signaling in leukocytes requires expression of complex-type N-glycans. Glycobiology 18(10):770–778
20. Fukui S, Feizi T, Galustian C, Lawson AM, Chai W (2002) Oligosaccharide microarrays for high-throughput detection and specifi city assignments of carbohydrate-protein interactions. Nat Biotechnol 20(10):1011–1017. doi: 10.1038/nbt735,nbt735 [pii]
21. Blixt O, Head S, Mondala T, Scanlan C, Hufl ejt ME, Alvarez R, Bryan MC, Fazio F, Calarese D, Stevens J, Razi N, Stevens DJ, Skehel JJ, van Die I, Burton DR, Wilson IA, Cummings R, Bovin N, Wong CH, Paulson JC (2004) Printed covalent glycan array for ligand profi ling of diverse glycan binding proteins. Proc Natl Acad Sci U S A 101(49):17033–17038. doi: 10.1073/pnas.0407902101,0407902101 [pii]
22. Disney MD, Seeberger PH (2004) The use of carbohydrate microarrays to study carbohydrate- cell interactions and to detect pathogens. Chem Biol 11(12):1701–1707. doi: 10.1016/j.chembiol.2004.10.011,S1074-5521(04)00312-6 [pii]
23. Stowell SR, Dias-Baruffi M, Penttila L, Renkonen O, Nyame AK, Cummings RD (2004) Human galectin-1 recognition of poly- N- acetyllactosamine and chimeric polysaccharides. Glycobiology 14(2):157–167
24. Arthur CM, Cummings RD, Stowell SR (2014) Using glycan microarrays to understand immunity. Curr Opin Chem Biol 18C:55–61. doi: 10.1016/j.cbpa.2013.12.017
25. Stowell SR, Arthur CM, McBride R, Berger O, Razi N, Heimburg-Molinaro J, Rodrigues JP, Noll AJ, von Gunten S, Smith DF, Knirel YA, Paulson JC, Cummings RD (2014) Microbial glycan microarrays defi ne key features of hostmicrobial interactions. Nat Chem Biol 10(6): 470–6
26. Leppanen A, Stowell S, Blixt O, Cummings RD (2005) Dimeric galectin-1 binds with high affi nity to alpha2,3-sialylated and non-sialylated terminal N-acetyllactosamine units on surfacebound extended glycans. J Biol Chem 280(7): 5549–5562
27. Sorme P, Kahl-Knutson B, Wellmar U, Nilsson UJ, Leffl er H (2003) Fluorescence polarization to study galectin-ligand interactions. Methods Enzymol 362:504–512. doi: 10.1016/ S 0 0 7 6 - 6 8 7 9 (0 3) 0 1 0 3 3 - 4, S0076687903010334 [pii]
28. Song X, Lasanajak Y, Xia B, Heimburg- Molinaro J, Rhea JM, Ju H, Zhao C, Molinaro RJ, Cummings RD, Smith DF (2011) Shotgun glycomics: a microarray strategy for functional glycomics. Nat Methods 8(1):85–90. doi: 10.1038/nmeth.1540, nmeth.1540 [pii]
29. Yu Y, Mishra S, Song X, Lasanajak Y, Bradley KC, Tappert MM, Air GM, Steinhauer DA, Halder S, Cotmore S, Tattersall P, Agbandje- McKenna M, Cummings RD, Smith DF (2012) Functional glycomic analysis of human milk glycans reveals the presence of virus receptors and embryonic stem cell biomarkers. J Biol Chem 287(53):44784–44799. doi: 10.1074/ jbc.M112.425819, M112.425819 [pii]
30. Palma AS, Feizi T, Zhang Y, Stoll MS, Lawson AM, Diaz-Rodriguez E, Campanero-Rhodes MA, Costa J, Gordon S, Brown GD, Chai W (2006) Ligands for the beta-glucan receptor, Dectin-1, assigned using “designer” microarrays of oligosaccharide probes (neoglycolipids) generated from glucan polysaccharides. J Biol Chem 281(9):5771–5779. doi: 10.1074/jbc. M511461200, M511461200 [pii]
31. Song X, Heimburg-Molinaro J, Dahms NM, Smith DF, Cummings RD (2012) Preparation of a mannose-6-phosphate glycan microarray through fl uorescent derivatization, phosphorylation, and immobilization of natural high- mannose N-glycans and application in ligand identifi cation of P-type lectins. Methods Mol Biol 808:137–148. doi: 10.1007/ 978-1-61779-373-8_9
32. Song X, Yu H, Chen X, Lasanajak Y, Tappert MM, Air GM, Tiwari VK, Cao H, Chokhawala HA, Zheng H, Cummings RD, Smith DF (2011) A sialylated glycan microarray reveals novel interactions of modifi ed sialic acids with proteins and viruses. J Biol Chem 286(36):31610–31622. doi: 10.1074/jbc. M111.274217, M111.274217 [pii]
33. Knirel YA, Gabius HJ, Blixt O, Rapoport EM, Khasbiullina NR, Shilova NV, Bovin NV (2014) Human tandem-repeat-type galectins bind bacterial non-betaGal polysaccharides. Glycoconj J 31(1):7–12. doi: 10.1007/ s10719-013-9497-3
34. Geissner A, Anish C, Seeberger PH (2014) Glycan arrays as tools for infectious disease research. Curr Opin Chem Biol 18C:38–45. doi: 10.1016/j.cbpa.2013.11.013
35. Stowell SR, Cho M, Feasley CL, Arthur CM, Song X, Colucci JK, Karmakar S, Mehta P, Dias-Baruffi M, McEver RP, Cummings RD (2009) Ligand reduces galectin-1 sensitivity to oxidative inactivation by enhancing dimer formation. J Biol Chem 284(8):4989–4999
36. Stowell SR, Qian Y, Karmakar S, Koyama NS, Dias-Baruffi M, Leffl er H, McEver RP, Cummings RD (2008) Differential roles of galectin-1 and galectin-3 in regulating leukocyte viability and cytokine secretion. J Immunol 180(5):3091–3102
37. Stowell SR, Arthur CM, Slanina KA, Horton JR, Smith DF, Cummings RD (2008) Dimeric galectin-8 induces phosphatidylserine exposure in leukocytes through polylactosamine recognition by the C-terminal domain. J Biol Chem 283(29):20547–20559
38. Poland PA, Rondanino C, Kinlough CL, Heimburg-Molinaro J, Arthur CM, Stowell SR, Smith DF, Hughey RP (2011) Identifi cation and characterization of endogenous galectins expressed in Madin Darby canine kidney cells. J Biol Chem 286(8):6780–6790. doi: 10.1074/jbc.M110.
39. Stowell SR, Arthur CM, Dias-Baruffi M, Rodrigues LC, Gourdine JP, Heimburg- Molinaro J, Ju T, Molinaro RJ, Rivera-Marrero C, Xia B, Smith DF, Cummings RD (2010) Innate immune lectins kill bacteria expressing blood group antigen. Nat Med 16(3):295–301. doi: 10.1038/nm.2103
40. Leppanen A, White SP, Helin J, McEver RP, Cummings RD (2000) Binding of glycosulfopeptides to P-selectin requires stereospecifi c contributions of individual tyrosine sulfate and sugar residues. J Biol Chem 275(50): 39569–39578. doi: 10.1074/jbc.M005005200, M005005200 [pii]