Brachypodium distachyon is a pathosystem model for the study of the wheat disease rhizoctonia root rot

Plant Pathology

Volumn 64, Issue 1, 2015, Pages 91-100

  Schneebeli, K ^a,b   Mathesius, U ^b   Watt, M ^a  

^a CSIRO   (Australia)

^b AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

Author keywords

Rhizoctonia solani; Brachypodium; Plant pathogen interaction

Indexed keywords

CROP PERFORMANCE; DISEASE RESISTANCE; FUNGUS; GENETIC VARIATION; GRASS; NEW RECORD; PATHOGENICITY; PHENOTYPE; ROOT ARCHITECTURE; ROOT ROT; SYMPTOM; WHEAT;

BRACHYPODIUM; BRACHYPODIUM DISTACHYON; RHIZOCTONIA; THANATEPHORUS CUCUMERIS; TRITICUM AESTIVUM;

EID: 84921472626     PISSN: 00320862     EISSN: 13653059     Source Type: Journal    
DOI: 10.1111/ppa.12227     Document Type: Article

References (35)

1. Alves SC, Worland B, Thole V, Snape JW, Bevan MW, Vain P, 2009. A protocol for Agrobacterium-mediated transformation of Brachypodium distachyon community standard line Bd21. Nature Protocols 4, 638-49.
2. Anderson JP, Lichtenzveig J, Gleason C, Oliver RP, Singh KB, 2010. The B-3 ethylene response factor MtERF1-1 mediates resistance to a subset of root pathogens in Medicago truncatula without adversely affecting symbiosis with rhizobia. Plant Physiology 154, 861-73.
3. Ayliffe M, Singh D, Park R, Moscou M, Pryor T, 2013. Infection of Brachypodium distachyon with selected grass rust pathogens. Molecular Plant-Microbe Interactions 26, 946-57.
4. Bragg JN, Wu J, Gordon SP et al., 2012. Generation and characterization of the Western Regional Research Center Brachypodium T-DNA insertional mutant collection. PLoS ONE 7, e41916.
5. Chochois V, Vogel JP, Watt M, 2012. Application of Brachypodium to the genetic improvement of wheat roots. Journal of Experimental Botany 63, 3467-74.
6. Draper J, Mur LAJ, Jenkins G et al., 2001. Brachypodium distachyon. A new model system for functional genomics in grasses. Plant Physiology 127, 1539-55.
7. Fletcher DJ, Underwood AJ, 2002. How to cope with negative estimates of components of variance in ecological field studies. Journal of Experimental Marine Biology and Ecology 273, 89-95.
8. Foley RC, Gleason CA, Anderson JP, Hamann T, Singh KB, 2013. Genetic and genomic analysis of Rhizoctonia solani interactions with Arabidopsis; evidence of resistance mediated through NADPH oxidases. PLoS ONE 8, e56814.
9. Gill J, Sivasithamparam K, Smettem K, 2000. Soil types with different texture affects development of Rhizoctonia root rot of wheat seedlings. Plant and Soil 221, 113-20.
10. Haun J, 1973. Visual quantification of wheat development. Agronomy Journal 65, 116-9.
11. International Brachypodium Initiative, 2010. Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature 463, 763-8.
12. James RA, Munns R, Kirkegaard JA, 1997. Contribution of Rhizoctonia to reduced seedling growth of direct-drilled wheat: studies with intact cores. Australian Journal of Agricultural Research 48, 1231-40.
13. Kazan K, Fitzgerald T, Liu C, Ayliffe M, Manners J, 2012. Genetic and genomic approaches for managing Fusarium pathogens causing head blight and crown rot in wheat. In: Canty S, Clark A, Anderson-Scully A, Van Sanford D, eds. Proceedings of the 2012 National Fusarium Head Blight Forum, 2012. East Lansing, MI/Lexington, KY, USA: US Wheat & Barley Scab Initiative, 139.
14. Kirkegaard JA, Munns R, James RA, Neate SM, 1999. Does water and phosphorus uptake limit leaf growth of Rhizoctonia-infected wheat seedlings? Plant and Soil 209, 157-66.
15. Knipfer T, Fricke W, 2011. Water uptake by seminal and adventitious roots in relation to whole-plant water flow in barley (Hordeum vulgare L.). Journal of Experimental Botany 62, 717-33.
16. MacNish GC, Neate SM, 1996. Rhizoctonia bare patch of cereals - an Australian perspective. Plant Disease 80, 965-71.
17. Masle J, Doussinault G, Farquhar GD, Sun B, 1989. Foliar stage in wheat correlates better to photothermal time than to thermal time. Plant, Cell & Environment 12, 235-47.
18. McDonald HJ, Rovira AD, 1985. Development of inoculation technique for Rhizoctonia solani and its application to screening cereal cultivars for resistance. In: Parker CA, Rovira AD, Moore KJ, Wong PT, Kollmorgen JF, eds. Ecology and Management of Soilborne Plant Pathogens. St Paul, MN, USA: American Phytopathological Society, 174-6.
19. Okubara PA, Jones SS, 2011. Seedling resistance to Rhizoctonia and Pythium spp. in wheat chromosome group 4 addition lines from Thinopyrum spp. Canadian Journal of Plant Pathology 33, 416-23.
20. Okubara PA, Steber CM, Demacon VL, Walter NL, Paulitz TC, Kidwell KK, 2009. Scarlet-Rz1, an EMS-generated hexaploid wheat with tolerance to the soilborne necrotrophic pathogens Rhizoctonia solani AG-8 and R. oryzae. Theoretical and Applied Genetics 119, 293-303.
21. Pankhurst CE, McDonald HJ, Hawke BG, 1995. Influence of tillage and crop rotation on the epidemiology of Pythium infections of wheat in a red-brown earth of South Australia. Soil Biology and Biochemistry 27, 1065-73.
22. Paulitz TC, Schroeder KL, 2005. A new method for the quantification of Rhizoctonia solani and R. oryzae from soil. Plant Disease 89, 767-72.
23. Peraldi A, Griffe LL, Burt C, Mcgrann GRD, Nicholson P, 2014. Brachypodium distachyon exhibits compatible interactions with Oculimacula spp. and Ramularia collo-cygni providing the first pathosystem model to study eyespot and Ramularia leaf spot diseases. Plant Pathology 63, 554-62.
24. Poorter H, Niklas KJ, Reich PB, Oleksyn J, Poot P, Mommer L, 2012. Biomass allocation to leaves, stems and roots: meta-analyses of interspecific variation and environmental control. New Phytologist 193, 30-50.
25. Prystupa P, Slafer G, Savin R, 2003. Leaf appearance, tillering and their coordination in response to NxP fertilization in barley. Plant and Soil 255, 587-94.
26. Refshauge SJ, 2007. Mechanisms of Wheat Root Infection by Rhizoctonia solani at Low Temperature. Canberra, Australia: Australian National University, PhD thesis.
27. Robinson DL, 1987. Estimation and use of variance components. The Statistician 36, 3-14.
28. Salamini F, Ozkan H, Brandolini A, Schafer-Pregl R, Martin W, 2002. Genetics and geography of wild cereal domestication in the near east. Nature Reviews Genetics 3, 429-41.
29. Schroeder K, Paulitz T, 2008. Effect of inoculum density and soil tillage on the development and severity of Rhizoctonia root rot. Phytopathology 98, 304-14.
30. Smith JD, Kidwell KK, Evans MA, Cook RJ, Smiley RW, 2003. Assessment of spring wheat genotypes for disease reaction to Rhizoctonia solani AG-8 in controlled environment and direct-seeded field evaluations. Crop Science 43, 694-700.
31. Ünal F, Dolar FS, 2012. First report of Rhizoctonia solani AG 8 on wheat in Turkey. Journal of Phytopathology 160, 52-4.
32. Vogel J, Bragg J, 2009. Brachypodium distachyon, a new model for the Triticeae. In: Feuillet C, Muehlbauer GJ, eds. Genetics and Genomics of the Triticeae. Dordrecht, The Netherlands: Springer, 427-49.
33. Vogel JP, Garvin DF, Leong OM, Hayden DM, 2006. Agrobacterium-mediated transformation and inbred line development in the model grass Brachypodium distachyon. Plant Cell, Tissue and Organ Culture 84, 199-211.
34. Wall P, Neate S, Graham R, Reuter D, Rovira A, 1994. The effect of rhizoctonia root disease and applied nitrogen on growth, nitrogen uptake and nutrient concentrations in spring wheat. Plant and Soil 163, 111-20.
35. Watt M, Schneebeli K, Dong P, Wilson IW, 2009. The shoot and root growth of Brachypodium and its potential as a model for wheat and other cereal crops. Functional Plant Biology 36, 960-9.