-
1
-
-
33746302556
-
Validation and casework testing of the BioPlex-11 for STR typing of telogen hair roots
-
K. Bender, and P. Schneider Validation and casework testing of the BioPlex-11 for STR typing of telogen hair roots Forensic Sci. Int. Genet. 161 2006 52 59
-
(2006)
Forensic Sci. Int. Genet.
, vol.161
, pp. 52-59
-
-
Bender, K.1
Schneider, P.2
-
2
-
-
0002260414
-
Mitochondrial DNA sequence analysis-Validation and use for forensic casework
-
M.M. Holland, and T.J. Parsons Mitochondrial DNA sequence analysis-Validation and use for forensic casework Forensic Sci. Rev. 11 1999 21 50
-
(1999)
Forensic Sci. Rev.
, vol.11
, pp. 21-50
-
-
Holland, M.M.1
Parsons, T.J.2
-
4
-
-
5044219883
-
Single nucleotide polymorphisms over the entire mtDNA genome that increase the power of forensic testing in Caucasians
-
M.D. Coble, R.S. Just, J.E. O'Callaghan, I.H. Letmanyi, C.T. Peterson, and J.A. Irwin Single nucleotide polymorphisms over the entire mtDNA genome that increase the power of forensic testing in Caucasians Int. J. Legal Med. 118 2004 137 146
-
(2004)
Int. J. Legal Med.
, vol.118
, pp. 137-146
-
-
Coble, M.D.1
Just, R.S.2
O'Callaghan, J.E.3
Letmanyi, I.H.4
Peterson, C.T.5
Irwin, J.A.6
-
5
-
-
67650654645
-
The use of mitochondrial DNA single nucleotide polymorphisms to assist in the resolution of three challenging forensic cases
-
R.S. Just, M.D. Leney, S.M. Barritt, C.W. Los, B.C. Smith, and T.D. Holland The use of mitochondrial DNA single nucleotide polymorphisms to assist in the resolution of three challenging forensic cases J. Forensic Sci. 54 2009 887 891
-
(2009)
J. Forensic Sci.
, vol.54
, pp. 887-891
-
-
Just, R.S.1
Leney, M.D.2
Barritt, S.M.3
Los, C.W.4
Smith, B.C.5
Holland, T.D.6
-
6
-
-
50349094257
-
The application of mtDNA SNPs to a forensic case
-
K.A. Sturk, M.D. Coble, S.M. Barritt, T.J. Parsons, and R.S. Just The application of mtDNA SNPs to a forensic case Forensic Sci. Int. Genet. Suppl. Ser. 1 2008 295 297
-
(2008)
Forensic Sci. Int. Genet. Suppl. Ser.
, vol.1
, pp. 295-297
-
-
Sturk, K.A.1
Coble, M.D.2
Barritt, S.M.3
Parsons, T.J.4
Just, R.S.5
-
7
-
-
34548233323
-
DNA identification of Earthquake McGoon 50 years postmortem
-
J.A. Irwin, S.M. Edson, O. Loreille, R.S. Just, S.M. Barritt, D.A. Lee, T.D. Holland, T.J. Parsons, and M.D. Leney DNA identification of Earthquake McGoon 50 years postmortem J. Forensic Sci. 52 2007 1115 1118
-
(2007)
J. Forensic Sci.
, vol.52
, pp. 1115-1118
-
-
Irwin, J.A.1
Edson, S.M.2
Loreille, O.3
Just, R.S.4
Barritt, S.M.5
Lee, D.A.6
Holland, T.D.7
Parsons, T.J.8
Leney, M.D.9
-
8
-
-
84903189897
-
High-quality and high-throughput massively parallel sequencing of the human mitochondrial genome using the Illumina MiSeq
-
J.L. King, B.L. LaRue, N. Novroski, M. Stoljarova, S.B. Seo, and X. Zeng High-quality and high-throughput massively parallel sequencing of the human mitochondrial genome using the Illumina MiSeq Forensic Sci. Int. Genet. 12 2014 128 135
-
(2014)
Forensic Sci. Int. Genet.
, vol.12
, pp. 128-135
-
-
King, J.L.1
Larue, B.L.2
Novroski, N.3
Stoljarova, M.4
Seo, S.B.5
Zeng, X.6
-
9
-
-
84921359516
-
Full mtGenome reference data: Development and characterization of 588 forensic-quality haplotypes representing three U.S. Populations
-
(under review)
-
R. Just, S. Fast, M. Scheible, K. Sturk-Andreaggi, A. Röck, J. Bush, et al., Full mtGenome reference data: development and characterization of 588 forensic-quality haplotypes representing three U.S. populations, Forensic Sci. Int. Genet. (under review).
-
Forensic Sci. Int. Genet
-
-
Just, R.1
-
10
-
-
79953867044
-
MtGenome reference population databases and the future of forensic mtDNA analysis
-
J.A. Irwin, W. Parson, M.D. Coble, and R.S. Just mtGenome reference population databases and the future of forensic mtDNA analysis Forensic Sci. Int. Genet. 5 2011 222 225
-
(2011)
Forensic Sci. Int. Genet.
, vol.5
, pp. 222-225
-
-
Irwin, J.A.1
Parson, W.2
Coble, M.D.3
Just, R.S.4
-
12
-
-
84876409191
-
Short-read, high-throughput sequencing technology for STR genotyping
-
D.M. Bornman, M.E. Hester, J.M. Schuetter, M.D. Kasoji, A. Minard-Smith, and C.A. Barden Short-read, high-throughput sequencing technology for STR genotyping BioTechniques 2012 1 6
-
(2012)
BioTechniques
, pp. 1-6
-
-
Bornman, D.M.1
Hester, M.E.2
Schuetter, J.M.3
Kasoji, M.D.4
Minard-Smith, A.5
Barden, C.A.6
-
13
-
-
84880874709
-
Evaluation of next generation mtGenome sequencing using the Ion Torrent Personal Genome Machine (PGM)
-
W. Parson, C. Strobl, G. Huber, B. Zimmermann, S.M. Gomes, and L. Souto Evaluation of next generation mtGenome sequencing using the Ion Torrent Personal Genome Machine (PGM) Forensic Sci. Int. Genet. 7 2013 543 549
-
(2013)
Forensic Sci. Int. Genet.
, vol.7
, pp. 543-549
-
-
Parson, W.1
Strobl, C.2
Huber, G.3
Zimmermann, B.4
Gomes, S.M.5
Souto, L.6
-
14
-
-
84901647986
-
Massively parallel pyrosequencing 454 methodology of the mitochondrial genome in forensic genetics
-
M. Mikkelsen, R.F. Hansen, A.J. Hansen, and N. Morling Massively parallel pyrosequencing 454 methodology of the mitochondrial genome in forensic genetics Forensic Sci. Int. Genet. 12 2014 30 37
-
(2014)
Forensic Sci. Int. Genet.
, vol.12
, pp. 30-37
-
-
Mikkelsen, M.1
Hansen, R.F.2
Hansen, A.J.3
Morling, N.4
-
15
-
-
84904976036
-
Development and assessment of an optimized next-generation DNA sequencing approach for the mtgenome using the Illumina MiSeq
-
J.A. McElhoe, M.M. Holland, K.D. Makova, M.S. Su, I.M. Paul, C.H. Baker, S.A. Faith, and B. Young Development and assessment of an optimized next-generation DNA sequencing approach for the mtgenome using the Illumina MiSeq Forensic Sci. Int. Genet. 13 2014 20 29
-
(2014)
Forensic Sci. Int. Genet.
, vol.13
, pp. 20-29
-
-
McElhoe, J.A.1
Holland, M.M.2
Makova, K.D.3
Su, M.S.4
Paul, I.M.5
Baker, C.H.6
Faith, S.A.7
Young, B.8
-
16
-
-
84902148385
-
Short tandem repeat typing on the 454 platform: Strategies and considerations for targeted sequencing of common forensic markers
-
M.K. Scheible, O. Loreille, R.S. Just, and J.A. Irwin Short tandem repeat typing on the 454 platform: Strategies and considerations for targeted sequencing of common forensic markers Forensic Sci. Int. Genet. 12 2014 107 119
-
(2014)
Forensic Sci. Int. Genet.
, vol.12
, pp. 107-119
-
-
Scheible, M.K.1
Loreille, O.2
Just, R.S.3
Irwin, J.A.4
-
17
-
-
84886474156
-
Non-uniform phenotyping of D12S391 resolved by second generation sequencing
-
S. Dalsgaard, E. Rockenbauer, A. Buchard, H.S. Mogensen, R. Frank-Hansen, and C. Borsting Non-uniform phenotyping of D12S391 resolved by second generation sequencing Forensic Sci. Int. Genet. 8 2014 195 199
-
(2014)
Forensic Sci. Int. Genet.
, vol.8
, pp. 195-199
-
-
Dalsgaard, S.1
Rockenbauer, E.2
Buchard, A.3
Mogensen, H.S.4
Frank-Hansen, R.5
Borsting, C.6
-
18
-
-
84883776304
-
Characterization of mutations and sequence variants in the D21S11 locus by next generation sequencing
-
E. Rockenbauer, S. Hansen, M. Mikkelsen, C. Borsting, and N. Morling Characterization of mutations and sequence variants in the D21S11 locus by next generation sequencing Forensic Sci. Int. Genet. 8 2014 68 72
-
(2014)
Forensic Sci. Int. Genet.
, vol.8
, pp. 68-72
-
-
Rockenbauer, E.1
Hansen, S.2
Mikkelsen, M.3
Borsting, C.4
Morling, N.5
-
19
-
-
84890359558
-
Finding the needle in the haystack: Differentiating identical twins in paternity testing and forensics by ultra-deep next generation sequencing
-
J. Weber-Lehmann, E. Schilling, G. Gradl, D.C. Richter, J. Wiehler, and B. Rolf Finding the needle in the haystack: differentiating identical twins in paternity testing and forensics by ultra-deep next generation sequencing Forensic Sci. Int. Genet. 9 2014 42 46
-
(2014)
Forensic Sci. Int. Genet.
, vol.9
, pp. 42-46
-
-
Weber-Lehmann, J.1
Schilling, E.2
Gradl, G.3
Richter, D.C.4
Wiehler, J.5
Rolf, B.6
-
20
-
-
84903485399
-
Simultaneous detection of human mitochondrial DNA and nuclear-inserted mitochondrial-origin sequences (NumtS) using forensic mtDNA amplification strategies and pyrosequencing technology
-
B.J. Bintz, G.B. Dixon, and M.R. Wilson Simultaneous detection of human mitochondrial DNA and nuclear-inserted mitochondrial-origin sequences (NumtS) using forensic mtDNA amplification strategies and pyrosequencing technology J. Forensic Sci. 59 2014 1064 1073
-
(2014)
J. Forensic Sci.
, vol.59
, pp. 1064-1073
-
-
Bintz, B.J.1
Dixon, G.B.2
Wilson, M.R.3
-
21
-
-
67650831473
-
Targeted retrieval and analysis of five Neandertal mtDNA genomes
-
A.W. Briggs, J.M. Good, and R.E. Green Targeted retrieval and analysis of five Neandertal mtDNA genomes Science 325 2009 318 321
-
(2009)
Science
, vol.325
, pp. 318-321
-
-
Briggs, A.W.1
Good, J.M.2
Green, R.E.3
-
22
-
-
75749095504
-
A complete mtDNA genome of an early modern human from Kostenki, Russia
-
J. Krause, A.W. Briggs, and M. Kircher A complete mtDNA genome of an early modern human from Kostenki, Russia Curr. Biol. 20 2010 231 236
-
(2010)
Curr. Biol.
, vol.20
, pp. 231-236
-
-
Krause, J.1
Briggs, A.W.2
Kircher, M.3
-
23
-
-
82455164206
-
Application of next generation sequencing technologies to the identification of highly degraded unknown soldiers' remains
-
O. Loreille, H. Koshinsky, V.Y. Fofanov, and J.A. Irwin Application of next generation sequencing technologies to the identification of highly degraded unknown soldiers' remains Forensic Sci. Int. Genet. Suppl. Ser. 3 2011 e540 e541
-
(2011)
Forensic Sci. Int. Genet. Suppl. Ser.
, vol.3
, pp. e540-e541
-
-
Loreille, O.1
Koshinsky, H.2
Fofanov, V.Y.3
Irwin, J.A.4
-
24
-
-
84888595248
-
DNA capture and next-generation sequencing can recover whole mitochondrial genomes from highly degraded samples for human identification
-
26-2223-4-26
-
J.E. Templeton, P.M. Brotherton, B. Llamas, J. Soubrier, W. Haak, and A. Cooper DNA capture and next-generation sequencing can recover whole mitochondrial genomes from highly degraded samples for human identification Investig. Genet. 4 2013 26-2223-4-26
-
(2013)
Investig. Genet.
, vol.4
-
-
Templeton, J.E.1
Brotherton, P.M.2
Llamas, B.3
Soubrier, J.4
Haak, W.5
Cooper, A.6
-
26
-
-
84921359514
-
Improved extraction efficiency of human mitochondrial DNA from hair shafts and its implications for sequencing of the entire mtGenome from a single hair fragment
-
Washington, DC
-
th Annual Meeting Washington, DC February 18-23 2012
-
(2012)
th Annual Meeting
-
-
Burnside, E.S.1
Bintz, B.J.2
Wilson, M.R.3
-
27
-
-
80055105202
-
Quantification of human mitochondrial DNA using synthesized DNA standards
-
M.F. Kavlick, H.S. Lawrence, R.T. Merritt, C. Fisher, A. Isenberg, J.M. Robertson, and B. Budowle Quantification of human mitochondrial DNA using synthesized DNA standards J. Forensic Sci. 56 2011 1457 1463
-
(2011)
J. Forensic Sci.
, vol.56
, pp. 1457-1463
-
-
Kavlick, M.F.1
Lawrence, H.S.2
Merritt, R.T.3
Fisher, C.4
Isenberg, A.5
Robertson, J.M.6
Budowle, B.7
-
28
-
-
84890286468
-
A high-throughput Sanger strategy for human mitochondrial genome sequencing
-
881-2164-14-881
-
E.A. Lyons, M.K. Scheible, K. Sturk-Andreaggi, J.A. Irwin, and R.S. Just A high-throughput Sanger strategy for human mitochondrial genome sequencing BMC Genomics 14 2013 881-2164-14-881
-
(2013)
BMC Genomics
, vol.14
-
-
Lyons, E.A.1
Scheible, M.K.2
Sturk-Andreaggi, K.3
Irwin, J.A.4
Just, R.S.5
-
29
-
-
0032868141
-
Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA
-
R.M. Andrews, I. Kubacka, P.F. Chinnery, R.N. Lightowlers, D.M. Turnbull, and N. Howell Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA Nat. Genet. 23 1999 147
-
(1999)
Nat. Genet.
, vol.23
, pp. 147
-
-
Andrews, R.M.1
Kubacka, I.2
Chinnery, P.F.3
Lightowlers, R.N.4
Turnbull, D.M.5
Howell, N.6
-
31
-
-
84887096962
-
Comparison of morphological and molecular genetic sex-typing on mediaeval human skeletal remains
-
C.M. Bauer, H. Niederstätter, G. McGlynn, H. Stadler, and W. Parson Comparison of morphological and molecular genetic sex-typing on mediaeval human skeletal remains Forensic Sci. Int. Genet. 7 2013 581 586
-
(2013)
Forensic Sci. Int. Genet.
, vol.7
, pp. 581-586
-
-
Bauer, C.M.1
Niederstätter, H.2
McGlynn, G.3
Stadler, H.4
Parson, W.5
-
32
-
-
64849084181
-
Sequencing strategy for the whole mitochondrial genome resulting in high quality sequences
-
L. Fendt, B. Zimmermann, M. Daniaux, and W. Parson Sequencing strategy for the whole mitochondrial genome resulting in high quality sequences BMC Genomics 10 2009 139
-
(2009)
BMC Genomics
, vol.10
, pp. 139
-
-
Fendt, L.1
Zimmermann, B.2
Daniaux, M.3
Parson, W.4
-
33
-
-
37249011343
-
Consistent treatment of length variants in the human mtDNA control region: A reappraisal
-
H.-J. Bandelt, and W. Parson Consistent treatment of length variants in the human mtDNA control region: a reappraisal Int. J. Legal Med. 122 2008 11 21
-
(2008)
Int. J. Legal Med.
, vol.122
, pp. 11-21
-
-
Bandelt, H.-J.1
Parson, W.2
-
34
-
-
84907343169
-
DNA Commission of the International Society for Forensic Genetics: Revised and extended guidelines for mitochondrial DNA typing
-
W. Parson, L. Gusmao, D.R. Hares, J.A. Irwin, W.R. Mayr, N. Morling, E. Pokorak, M. Prinz, A. Salas, P.M. Schneider, and T.J. Parsons DNA Commission of the International Society for Forensic Genetics: revised and extended guidelines for mitochondrial DNA typing Forensic Sci. Int. Genet. 13 2014 134 142
-
(2014)
Forensic Sci. Int. Genet.
, vol.13
, pp. 134-142
-
-
Parson, W.1
Gusmao, L.2
Hares, D.R.3
Irwin, J.A.4
Mayr, W.R.5
Morling, N.6
Pokorak, E.7
Prinz, M.8
Salas, A.9
Schneider, P.M.10
Parsons, T.J.11
-
35
-
-
67349249833
-
Mini-midi-mito: Adapting the amplification and sequencing strategy of mtDNA to the degradation state of crime scene samples
-
C. Berger, and W. Parson Mini-midi-mito: Adapting the amplification and sequencing strategy of mtDNA to the degradation state of crime scene samples Forensic Sci. Int. Genet. 3 2009 149 153
-
(2009)
Forensic Sci. Int. Genet.
, vol.3
, pp. 149-153
-
-
Berger, C.1
Parson, W.2
-
36
-
-
84921359513
-
-
Primer 3: bioinfo.ut.ee/primer3-0.4.0/
-
Primer 3: bioinfo.ut.ee/primer3-0.4.0/.
-
-
-
-
37
-
-
84921359512
-
-
Oligo Analyzer 3.1
-
Oligo Analyzer 3.1: eu.idtdna.com/analyzer/Applications/OligoAnalyzer/Default.aspx.
-
-
-
-
38
-
-
84871020350
-
-
genome.ucsc.edu/cgi-bin/hgPcr
-
UCSC In-silico PCR: genome.ucsc.edu/cgi-bin/hgPcr.
-
UCSC In-silico PCR
-
-
-
39
-
-
3943088401
-
AutoDimer: A screening tool for primer-dimer and hairpin structures
-
P.M. Vallone, and J.M. Butler AutoDimer: a screening tool for primer-dimer and hairpin structures Biotechniques 37 2004 226 231
-
(2004)
Biotechniques
, vol.37
, pp. 226-231
-
-
Vallone, P.M.1
Butler, J.M.2
-
40
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
H. Li, and R. Durbin Fast and accurate short read alignment with Burrows-Wheeler transform Bioinformatics 25 2009 1754 1760
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
41
-
-
84921359511
-
-
http://picard.sourceforge.net
-
picardtools: http://picard.sourceforge.net.
-
Picardtools
-
-
-
42
-
-
79955483667
-
A framework for variation discovery and genotyping using next-generation DNA sequencing data
-
M.A. DePristo, E. Banks, R. Poplin, K.V. Garimella, J.R. Maguire, and C. Hartl A framework for variation discovery and genotyping using next-generation DNA sequencing data Nat. Genet. 43 2011 491 498
-
(2011)
Nat. Genet.
, vol.43
, pp. 491-498
-
-
Depristo, M.A.1
Banks, E.2
Poplin, R.3
Garimella, K.V.4
Maguire, J.R.5
Hartl, C.6
-
43
-
-
84875634162
-
Integrative Genomics Viewer (IGV): High-performance genomics data visualization and exploration
-
H. Thorvaldsdóttir, J.T. Robinson, and J.P. Mesirov Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration Briefings Bioinform. 14 2013 178 192
-
(2013)
Briefings Bioinform.
, vol.14
, pp. 178-192
-
-
Thorvaldsdóttir, H.1
Robinson, J.T.2
Mesirov, J.P.3
-
44
-
-
84896907379
-
Development of forensic-quality full mtGenome haplotypes: Success rates with low template specimens
-
R.S. Just, M.K. Scheible, S.A. Fast, K. Sturk-Andreaggi, J.L. Higginbotham, and E.A. Lyons Development of forensic-quality full mtGenome haplotypes: Success rates with low template specimens Forensic Sci. Int. Genet. 10 2014 73 79
-
(2014)
Forensic Sci. Int. Genet.
, vol.10
, pp. 73-79
-
-
Just, R.S.1
Scheible, M.K.2
Fast, S.A.3
Sturk-Andreaggi, K.4
Higginbotham, J.L.5
Lyons, E.A.6
-
45
-
-
0019423856
-
Sequence and organization of the human mitochondrial genome
-
S. Anderson, A.T. Bankier, B.G. Barrell, M.H. de Bruijn, A.R. Coulson, and J. Drouin Sequence and organization of the human mitochondrial genome Nature 290 1981 457 465
-
(1981)
Nature
, vol.290
, pp. 457-465
-
-
Anderson, S.1
Bankier, A.T.2
Barrell, B.G.3
De Bruijn, M.H.4
Coulson, A.R.5
Drouin, J.6
-
46
-
-
76749141381
-
Ancient human genome sequence of an extinct Palaeo-Eskimo
-
M. Rasmussen, Y. Li, S. Lindgreen, J. Pederson, A. Albrechtsen, I. Moltke, and M. Mestpalu Ancient human genome sequence of an extinct Palaeo-Eskimo Nature 463 2010 757 762
-
(2010)
Nature
, vol.463
, pp. 757-762
-
-
Rasmussen, M.1
Li, Y.2
Lindgreen, S.3
Pederson, J.4
Albrechtsen, A.5
Moltke, I.6
Mestpalu, M.7
-
47
-
-
34848867598
-
Whole-genome shotgun sequencing of mitochondria from ancient hair shafts
-
M.T.P. Gilbert, L.P. Tomsho, S. Rendulic, M. Packard, D.I. Drautz, and A. Sher Whole-genome shotgun sequencing of mitochondria from ancient hair shafts Science 317 2007 1927 1930
-
(2007)
Science
, vol.317
, pp. 1927-1930
-
-
Gilbert, M.T.P.1
Tomsho, L.P.2
Rendulic, S.3
Packard, M.4
Drautz, D.I.5
Sher, A.6
-
48
-
-
56749119854
-
Sequencing the nuclear genome of the extinct woolly mammoth
-
W. Miller, D.I. Drautz, A. Ratan, B. Pusey, J. Qi, and A.M. Lesk Sequencing the nuclear genome of the extinct woolly mammoth Nature 456 2008 387 390
-
(2008)
Nature
, vol.456
, pp. 387-390
-
-
Miller, W.1
Drautz, D.I.2
Ratan, A.3
Pusey, B.4
Qi, J.5
Lesk, A.M.6
|